CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, plasma membrane

Predictor Summary:

nucleus 3
plastid 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, nucleus, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68432	Soybean	cytosol, nucleus, plastid	80.06	90.54
KRH33805	Soybean	nucleus	62.48	71.0
KRG90521	Soybean	peroxisome	61.79	70.21
VIT_14s0060g01090.t01	Wine grape	nucleus	51.46	57.66
GSMUA_Achr8P29940_001	Banana	cytosol	46.3	52.7
TraesCS3D01G195400.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	42.96	51.33
TraesCS3B01G221000.2	Wheat	cytosol, mitochondrion, nucleus, vacuole	42.96	50.91
TraesCS3A01G192200.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	42.68	50.49
EES00630	Sorghum	cytosol	43.1	50.41
Os01t0300900-01	Rice	cytosol	43.65	50.16
Zm00001d040606_P001	Maize	cytosol	43.24	50.0
HORVU3Hr1G040720.1	Barley	mitochondrion, nucleus, peroxisome, vacuole	42.68	49.43
Zm00001d009123_P001	Maize	cytosol	42.26	48.48
PGSC0003DMT400007146	Potato	cytosol	41.56	45.57
Solyc01g100600.2.1	Tomato	cytosol	26.22	37.68
KRH43755	Soybean	cytosol	10.46	22.87
KRH03160	Soybean	cytosol	19.53	22.36
KRH63188	Soybean	cytosol	19.11	22.35
KRH54725	Soybean	cytosol	18.97	22.19
KRH56785	Soybean	nucleus	19.11	21.75
KRG92046	Soybean	cytosol	14.23	20.48
KRG92113	Soybean	cytosol	9.9	19.35
KRH34674	Soybean	cytosol	12.97	18.45
KRG92111	Soybean	cytosol	3.49	18.25
KRG92884	Soybean	nucleus	16.46	17.91
KRG96823	Soybean	cytosol, plastid	16.18	17.87
KRH68531	Soybean	nucleus	16.32	17.78
KRH63715	Soybean	nucleus	14.5	15.76
KRH21038	Soybean	mitochondrion	15.06	15.21
KRH54239	Soybean	nucleus	13.95	15.15
KRH02216	Soybean	mitochondrion	14.92	15.11
KRH50909	Soybean	nucleus	15.2	14.99
KRH11220	Soybean	mitochondrion	14.78	14.76
KRH02069	Soybean	cytosol	9.21	10.71
KRH51088	Soybean	cytosol	16.04	10.7

Protein Annotations

EMBL:ACUP02012162	EnsemblPlants:KRG96716	EnsemblPlantsGene:GLYMA_19G228200	EntrezGene:100796366	Gene3D:2.120.10.80	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244
PANTHER:PTHR23244:SF417	PFAM:PF01344	PFAM:PF13415	PFAM:PF13418	ProteinID:KRG96716	ProteinID:KRG96716.1
SEG:seg	SUPFAM:SSF117281	UniParc:UPI000295DCA3	UniProt:K7MZU1	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr19:+:47962741..47967165

Molecular Weight (calculated)

78753.1 Da

IEP (calculated)

8.519

GRAVY (calculated)

-0.268

Length

717 amino acids

Sequence
(BLAST)

001: MFSLHPSLAV GCHSDLDLKA PIFSCLLILI VDASLGLLMS SLNQSLFPYD SSSLTVSSSV FNPYAFLSNR HHTLTLTLHT SQHRRQMSSL LPQVAKNKAM
101: WLNPKVLGFN PPERWGHSAC FSKGLMYVFG GCCGGLHFCD VLTLDLNKMV WSKLTTTGEK PGPRDSHSAV LVGHKMIVFG GTNGFKKVNH IHILDLVTKE
201: WVRPECKGNP PSPRESHTAT LVGDERIVIF GGSGEGHANY LNDLHILDLR TMSWTSPELK GDLPIPRDSH STLAIGNKLI VYGGDSGDQY HGNVHMLDMT
301: TMTWSKLSIQ GSPPGVRAGH AAVNIGTKVY IIGGVGDKRY YNDVWIFDIC NFSWTQLDIR FHQPQGRFSH TAVAAGMDIA IYGGCGEDER PLNELLVLQV
401: GAEHLNGVYY IPMCKPFGTY WNQEKKIIPG EADANSKTLL VRNNVEAFGK GAYEVASEKL PPYHFDSDTS RQKRRRIAAA KVCDVESEQE ENFLTLSLHS
501: FPCQSDQEQT PSQKAKTLFP STCQYNNGSN YKRTLKNVHF LQHQLKQEHC LYVREDRKRA QLQAAEQKSM GRGPIQHLIG AEVRGRVDGP FDSVSLSPAA
601: VNGRIFRGVI FSPGAAGVVS KGGSVEPKCS LTSSFPFSSQ AYLNSNHVGN LTASQQAPIR LHAEPCHGSW QTPVALPFPI IRGTPSVVSK ENKINSDLQG
701: LVLTLGGPAS GHPQVKH

Best Arabidopsis Sequence Match ( AT1G18610.1 )
(BLAST)

001: MRWERVRQLQ QQVGLGESSS GPGKRWGHTC NAIKGGSFLY VFGGYGRDNC QTNQVHVFDA AKQIWTQPMI NGTPPPPRDS HSCTTVGDNL FVFGGTDGVN
101: PLKDLYILDT SSHTWKCPSV RGEGPEAREG HSATLVGKRL FVFGGCGKSS GINEEIYYND VYIFNTETFV WKRAVTIGNP PSARDSHSCS SWKNKLVVIG
201: GEDGHDYYLS DVHILDTDTL IWKELNTSGQ LLTPRAGHVT VSLGRNFFVF GGFTDAQNLY DDLYVLDVDT CIWSKVLTMG EGPSARFSSA GACLDPHKAG
301: FLVIVGGCNK NLEALDDMFY LQTGLGYDAR FDQNVGMLSL KKQLKIKCQE QSHASSLYDK SLVRINMDHQ GRGNFGLNTC QFNEGKMMFQ ARITESYPVG
401: YTMETMIDGK VLRGVLFSNK RSSILPADQS FSRKRPAMSN GDQDNRSKIS RTLIKDQANA VESKDSQLNG MEAGIDTISN PLGVNITTVA VAPHETETSV
501: VTSDAKNQDA SQLDMGTVNT VNTAPSSVPQ VDEASLESRN AITIDDRANK TGLGES

Arabidopsis Description

F25I16.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ82]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.