CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11220	Soybean	mitochondrion	91.97	90.95
KRH02216	Soybean	mitochondrion	75.77	75.99
PGSC0003DMT400058372	Potato	mitochondrion	33.52	74.38
KRH50909	Soybean	nucleus	74.51	72.76
VIT_05s0020g01740.t01	Wine grape	mitochondrion	70.56	69.87
Solyc01g067480.2.1	Tomato	mitochondrion	63.1	68.19
CDY13903	Canola	mitochondrion	59.15	62.31
Bra002170.1-P	Field mustard	mitochondrion	59.86	60.71
CDX92598	Canola	mitochondrion	59.58	60.43
AT5G18590.1	Thale cress	mitochondrion	60.14	60.31
PGSC0003DMT400050298	Potato	cytosol, plastid	31.27	59.04
GSMUA_Achr3P23920_001	Banana	mitochondrion	56.9	56.82
PGSC0003DMT400058369	Potato	mitochondrion	24.23	54.6
OQU83951	Sorghum	mitochondrion	52.25	54.0
TraesCSU01G068300.1	Wheat	mitochondrion	51.27	53.45
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	53.52	53.37
TraesCS4D01G147200.1	Wheat	mitochondrion	51.13	53.07
TraesCS4A01G167800.1	Wheat	mitochondrion	50.7	52.63
Zm00001d048718_P010	Maize	mitochondrion	51.27	52.37
KXG23613	Sorghum	mitochondrion	50.7	52.02
HORVU4Hr1G032550.32	Barley	mitochondrion	50.0	51.82
Os12t0538800-01	Rice	mitochondrion, nucleus	49.3	50.14
TraesCS5B01G100500.1	Wheat	mitochondrion	48.17	49.85
TraesCS5A01G094400.1	Wheat	mitochondrion	48.17	49.78
TraesCS5D01G106700.1	Wheat	mitochondrion	48.03	49.71
HORVU5Hr1G025430.25	Barley	mitochondrion	44.65	45.35
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	48.03	44.58
Os11t0657000-01	Rice	mitochondrion	10.14	44.44
KRG92111	Soybean	cytosol	5.49	28.47
KRH34674	Soybean	cytosol	19.86	27.98
KRG92113	Soybean	cytosol	14.08	27.25
KRG96823	Soybean	cytosol, plastid	21.83	23.88
KRH68531	Soybean	nucleus	22.11	23.86
KRG92884	Soybean	nucleus	20.7	22.31
KRH43755	Soybean	cytosol	9.86	21.34
KRH33805	Soybean	nucleus	16.2	18.23
KRG90521	Soybean	peroxisome	16.2	18.23
KRH68432	Soybean	cytosol, nucleus, plastid	15.21	17.03
KRG92046	Soybean	cytosol	11.69	16.67
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	15.21	15.06
KRH63715	Soybean	nucleus	13.66	14.7
KRH54239	Soybean	nucleus	13.38	14.39
KRH54725	Soybean	cytosol	12.25	14.19
KRH63188	Soybean	cytosol	11.97	13.87
KRH56785	Soybean	nucleus	11.97	13.49
KRH03160	Soybean	cytosol	11.83	13.42
KRH02069	Soybean	cytosol	10.14	11.69
KRH51088	Soybean	cytosol	16.06	10.6

Protein Annotations

EntrezGene:100781912	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02008334	ncoils:Coil	EnsemblPlantsGene:GLYMA_13G216400
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR015915	UniProt:K7M123	ProteinID:KRH21037.1
EnsemblPlants:KRH21038	ProteinID:KRH21038	ProteinID:KRH21038.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF01344
PFAM:PF13418	PANTHER:PTHR23244	PANTHER:PTHR23244:SF308	SUPFAM:SSF117281	UniParc:UPI00023CF173	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:32958278..32965462

Molecular Weight (calculated)

78550.3 Da

IEP (calculated)

9.440

GRAVY (calculated)

-0.453

Length

710 amino acids

Sequence
(BLAST)

001: MFGFSRRHMK LGSRLKVQLS DTTLGTRSPI RHHKRNVNSN GDRVTGTSGH SEKMLSSAAP DMHTCTSGSS ENWMVLSISG DKPTPRSYHA AAVIQNKMIV
101: VGGESGSGLL DDVQVLNFDR FSWTMASSKL YLSPSSLPLK LPACKGHCLV SWGGKALLIG GKTDPASDKI SVWAFDTDTE CWSPMEAKGD IPVARSGHTV
201: VMANSVLILF GGEDVKRRKL NDLHMFDLKS LSWLPLHYTG AAPCPRFNHV AALYDGKILF IFGGASKSRT LNDLYSLDFE TMAWSRIKIR GFHPSPRAGC
301: CGVLCGTKWY ITGGGSKKKR HGETLVYDVV KSEWSVAITS PPSSITTNQG FSLTLVQHKD KDFLVAFGGS KKEPSNQVEV LITEKNEFVL RRRPTSTKDP
401: RSILLDSLSA GLASQLKNDS SQRLINSVAR QNLASVIEHS SERKSLSESL LVEYSDSLPT NISLRRQFDH DEGYNADVRI GKHSEDKSSL TRAADHRTNQ
501: NDPRNHMSRN GAKTNMEEQV LVSGSSNQQN LGFGNPLLES DDVSFPDNSK LGSLSTDSNI HHYYETKVAS LMRKFGILEG QLSAALASRE AAEKSLASAF
601: KSRQEMERKL ADTLKEMELL REKLVNAELA QEEANNLSNM VHADNVRLEH DVAFLKAVLD DTQKELHSTR GVLAAERTRA LQLQVEVFHL KQRLQSMENR
701: VPTPRKPFQV

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.