Factsheet for GSMUA_Achr3P23920_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	77.5	77.39
PGSC0003DMT400058372	Potato	mitochondrion	29.11	64.69
Solyc01g067480.2.1	Tomato	mitochondrion	55.98	60.58
VIT_05s0020g01740.t01	Wine grape	mitochondrion	60.2	59.69
OQU83951	Sorghum	mitochondrion	56.12	58.08
Os11t0657000-01	Rice	mitochondrion	13.22	58.02
TraesCS4A01G167800.1	Wheat	mitochondrion	55.13	57.31
TraesCSU01G068300.1	Wheat	mitochondrion	54.85	57.27
TraesCS4D01G147200.1	Wheat	mitochondrion	54.99	57.16
KRH21038	Soybean	mitochondrion	56.82	56.9
Zm00001d048718_P010	Maize	mitochondrion	55.56	56.83
KRH02216	Soybean	mitochondrion	56.12	56.36
KRH11220	Soybean	mitochondrion	56.54	55.99
HORVU4Hr1G032550.32	Barley	mitochondrion	53.73	55.77
PGSC0003DMT400050298	Potato	cytosol, plastid	29.4	55.59
TraesCS5D01G106700.1	Wheat	mitochondrion	53.45	55.39
TraesCS5B01G100500.1	Wheat	mitochondrion	53.45	55.39
KXG23613	Sorghum	mitochondrion	53.87	55.35
TraesCS5A01G094400.1	Wheat	mitochondrion	53.31	55.17
CDY13903	Canola	mitochondrion	51.9	54.75
KRH50909	Soybean	nucleus	55.41	54.2
Bra002170.1-P	Field mustard	mitochondrion	52.6	53.43
CDX92598	Canola	mitochondrion	52.6	53.43
Os12t0538800-01	Rice	mitochondrion, nucleus	52.18	53.15
AT5G18590.1	Thale cress	mitochondrion	52.6	52.82
HORVU5Hr1G025430.25	Barley	mitochondrion	49.51	50.36
PGSC0003DMT400058369	Potato	mitochondrion	21.8	49.21
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	51.05	47.45
GSMUA_Achr9P23600_001	Banana	cytosol	19.41	24.56
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	23.21	24.48
GSMUA_Achr6P20340_001	Banana	plastid	23.21	24.19
GSMUA_Achr8P07640_001	Banana	cytosol	13.92	19.84
GSMUA_Achr10P...	Banana	cytosol	5.63	17.62
GSMUA_Achr3P30430_001	Banana	cytosol	11.53	17.45
GSMUA_Achr8P29940_001	Banana	cytosol	15.05	16.98
GSMUA_Achr10P...	Banana	nucleus	9.14	13.13
GSMUA_Achr6P29460_001	Banana	cytosol	15.19	10.12

Protein Annotations

EnsemblPlants:GSMUA_Achr3P23920_001	EnsemblPlants:GSMUA_Achr3T23920_001	EnsemblPlantsGene:GSMUA_Achr3G23920_001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil	PANTHER:PTHR23244
PANTHER:PTHR23244:SF308	PFAM:PF01344	PFAM:PF13418	SEG:seg	SUPFAM:SSF117281	UniParc:UPI0002955707
UniProt:M0SHA8	MapMan:35.1	:	:	:	:

Description

kelch repeat protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G23920_001]

Coordinates

chr3:+:24606730..24617988

Molecular Weight (calculated)

78527.5 Da

IEP (calculated)

8.848

GRAVY (calculated)

-0.394

Length

711 amino acids

Sequence
(BLAST)

001: MPKIFGFSRR RTKLGRLKVH LADPVQGTRS PIRPSKRHSQ SNEENEVLPS SSGRSDDHNC HCSSRTFDLH KCSVDSSENW KVLPTYGNKP TPRFHHAAAI
101: VGSKMVVVGG DSSHGVLDDT LILSLDTLTW ATATSNVYSS PGGVSLKIPA CRGHALVSWG KSALLVGGKT EPPSDKLSVW SFNVETECWS HIEAKGNIPV
201: ARSGHTVLRA GTVLILFGGE DVKGRKLNDL FMFDLKSLSW LPLHYKGTGP SARSNHVAAL HEDKLLFVFG GQSKSRILND LYSLDFETMI WSRIKVRGHH
301: PSPRAGSCGA LCGTKWYITG GGSKRKRHAE TLVFDVLKLE WSASVVSPTV SITTNRGFSL LPVHHKDKSF LLAFGGYKKE SSNQVEILFL VTNKCSMSWR
401: SAPETELLPY EECAANIREL GAHLKAVSSP ASVNPVARHS LASALEQQIS GRKSISDDPS VSTLCKQCHQ DQDYGLAAKS QKPLEDEKYE TDDQLVLHNT
501: SSQRSKRQEA EIKMDIAGIL ASTEEMHAES EGSNVDRVLP IETDGRSVLT NPSNIYQLYE TKIASLTRKN VLLEEQLKAA LTCREAAEKN LSSAVKSKQE
601: VETKLADTVK EVELLKEKLA GVELAQEEAN SLSNIVHSHN VRLEHDVAFL KAILDDTQKA RQILFELYST RGVLAGERAR AFQLQVEVFH LKQRLQSLEN
701: RAPTPRKPIQ M

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.