Factsheet for GSMUA_Achr2P02340_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P20340_001	Banana	plastid	84.87	83.87
EER90565	Sorghum	plastid	74.33	76.02
Os03t0835600-01	Rice	plastid	72.26	74.35
VIT_14s0060g02410.t01	Wine grape	plastid	73.44	73.44
TraesCS4A01G356400.2	Wheat	plastid	72.55	73.09
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	72.55	73.09
TraesCS5D01G515900.2	Wheat	plastid	72.11	72.65
Zm00001d034758_P003	Maize	plastid	72.85	72.1
HORVU5Hr1G117970.2	Barley	plastid	72.11	69.83
Solyc01g099350.2.1	Tomato	extracellular	68.84	69.36
PGSC0003DMT400063503	Potato	extracellular	33.68	67.76
CDY05166	Canola	cytosol, nucleus, plastid	66.62	67.42
Bra039439.1-P	Field mustard	cytosol	66.62	67.32
CDY27769	Canola	cytosol	66.47	67.27
KRG96823	Soybean	cytosol, plastid	64.24	66.72
AT3G05420.2	Thale cress	cytosol	66.17	66.67
KRH68531	Soybean	nucleus	64.84	66.41
KRG92884	Soybean	nucleus	64.09	65.55
CDY40708	Canola	cytosol	64.69	65.47
CDY18777	Canola	cytosol	64.24	65.11
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	64.39	64.97
Bra040219.1-P	Field mustard	cytosol	64.09	64.96
CDX74147	Canola	cytosol, nucleus, plastid	64.09	64.86
CDY18797	Canola	cytosol	63.95	64.71
CDY05568	Canola	plastid	63.65	64.32
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	63.35	64.02
Bra001147.1-P	Field mustard	cytosol	64.39	63.54
CDY25029	Canola	cytosol, nucleus, plastid	63.06	63.43
Zm00001d046434_P003	Maize	plastid	56.82	62.89
Zm00001d012892_P002	Maize	plastid	70.77	60.92
HORVU5Hr1G025310.1	Barley	cytosol	42.28	59.25
TraesCS5D01G106400.1	Wheat	cytosol	45.4	58.17
Os12t0540800-01	Rice	extracellular	45.4	58.06
TraesCS5A01G094000.1	Wheat	cytosol	45.1	57.69
TraesCS5B01G100100.1	Wheat	cytosol	44.96	57.28
EES16101	Sorghum	cytosol, nucleus, plastid	44.07	55.1
Zm00001d041692_P001	Maize	nucleus	40.65	50.46
GSMUA_Achr9P23600_001	Banana	cytosol	35.46	42.53
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	24.63	23.31
GSMUA_Achr3P23920_001	Banana	mitochondrion	24.48	23.21
GSMUA_Achr3P30430_001	Banana	cytosol	14.99	21.49
GSMUA_Achr8P07640_001	Banana	cytosol	14.99	20.24
GSMUA_Achr10P...	Banana	cytosol	6.38	18.94
GSMUA_Achr8P29940_001	Banana	cytosol	16.91	18.1
GSMUA_Achr10P...	Banana	nucleus	9.05	12.32
GSMUA_Achr6P29460_001	Banana	cytosol	19.29	12.18

Protein Annotations

Gene3D:1.20.80.10	Gene3D:2.120.10.80	MapMan:35.1	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	ncoils:Coil
InterPro:FERM/acyl-CoA-bd_prot_sf	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr2G02340_001
EnsemblPlants:GSMUA_Achr2P02340_001	EnsemblPlants:GSMUA_Achr2T02340_001	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR000582	InterPro:IPR014352	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M0S4H5	PFAM:PF00887	PFAM:PF01344	PFAM:PF13415
PFAM:PF13418	PFscan:PS51228	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SUPFAM:SSF47027	SUPFAM:SSF50965
UniParc:UPI000295CBC9	SEG:seg	:	:	:	:

Description

Acyl-CoA-binding domain-containing protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr2G02340_001]

Coordinates

chr2:-:8187953..8203137

Molecular Weight (calculated)

73411.4 Da

IEP (calculated)

4.697

GRAVY (calculated)

-0.360

Length

674 amino acids

Sequence
(BLAST)

001: MASAGLAYPD RFYAAAAYAG FGGSPQSSAA GASRFQNDVA LLLYGLYQQA TVGPCTDPKP RAWNPVEHSK WTSWHGLGNM ASTEAMRLFV KILEEEDPAW
101: YSRVPELAAE SVVDVEMLKP KVEPATVSAS ENGDSLPETK TISTENGLLL ETQDKDVVME GLGLVSIYDQ WVAPSVSGQR PKPRYAHGAA VLQEKMYIFG
201: GNHNGRYLSD VQVLDLKSLT WSRIEAKALA GSLDSSTTGS VAPSAGHSLI PWGDKILSIG GHTKDPSETI TVKEFDPQTC LWSNLKTYGK PPISRGGQSV
301: TLVGNTLVIF GGEDAKRSLL NDLHILDLET MTWDDIDAIG TPPAPRSDHA AACHADRYLL IFGGGSHATC FNDLHVLDLQ TMEWSRPKQQ GVTPGPRAGH
401: AGVTVGENWF IAGGGNNMNG ISETLVLNMA TLVWSVVTTV QGRVPLASEG LSLVTSTYKG EDFLVSFGGY NGRYSNEVYV LKPSHISDLQ SRMIDGPVSD
501: TIAAVLPTTN TSRDMEPEIE GAQDKKIKEI EMDNGDSELN IRNEETIERI VESLKAEKEE LESTFNKEQL QNLQIKQELA EAESRNTELT KASFISELQS
601: VRSQLAAEQS RCFKLEVDVA ELRQKLQAME ALEKEVELLR RQKAASEQEA LSAKQRQDSG GLWGWLAGSP PPEK

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.