Factsheet for HORVU5Hr1G025310.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G106400.1	Wheat	cytosol	95.43	87.26
TraesCS5A01G094000.1	Wheat	cytosol	95.43	87.1
TraesCS5B01G100100.1	Wheat	cytosol	95.01	86.39
Os12t0540800-01	Rice	extracellular	74.64	68.12
EES16101	Sorghum	cytosol, nucleus, plastid	73.39	65.49
Zm00001d041692_P001	Maize	nucleus	66.53	58.93
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	59.25	42.28
GSMUA_Achr6P20340_001	Banana	plastid	59.88	42.23
HORVU5Hr1G117970.2	Barley	plastid	59.25	40.95
VIT_14s0060g02410.t01	Wine grape	plastid	57.17	40.8
Solyc01g099350.2.1	Tomato	extracellular	55.51	39.91
KRG96823	Soybean	cytosol, plastid	53.85	39.91
KRH68531	Soybean	nucleus	54.47	39.82
KRG92884	Soybean	nucleus	54.05	39.45
CDY05166	Canola	cytosol, nucleus, plastid	54.05	39.04
CDX74147	Canola	cytosol, nucleus, plastid	54.05	39.04
Bra040219.1-P	Field mustard	cytosol	53.85	38.95
CDY27769	Canola	cytosol	53.85	38.89
Bra039439.1-P	Field mustard	cytosol	53.85	38.83
CDY18777	Canola	cytosol	53.43	38.65
CDY18797	Canola	cytosol	53.22	38.44
Bra001147.1-P	Field mustard	cytosol	54.26	38.21
CDY40708	Canola	cytosol	52.81	38.14
AT3G05420.2	Thale cress	cytosol	52.81	37.97
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	51.98	37.48
CDY05568	Canola	plastid	51.77	37.33
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	51.77	37.28
CDY25029	Canola	cytosol, nucleus, plastid	51.77	37.16
HORVU6Hr1G093000.5	Barley	cytosol	38.67	34.83
PGSC0003DMT400063503	Potato	extracellular	23.7	34.03
HORVU5Hr1G051310.1	Barley	cytosol, mitochondrion, peroxisome	16.84	24.77
HORVU4Hr1G032550.32	Barley	mitochondrion	29.94	21.02
HORVU5Hr1G025430.25	Barley	mitochondrion	28.07	19.31
HORVU5Hr1G117920.1	Barley	cytosol	19.54	17.97
HORVU3Hr1G040720.1	Barley	mitochondrion, nucleus, peroxisome, vacuole	20.37	15.83
HORVU2Hr1G083780.14	Barley	nucleus, plastid	18.09	13.04
HORVU2Hr1G046680.19	Barley	cytosol	17.88	7.87

Protein Annotations

EnsemblPlants:HORVU5Hr1G025310.1	EnsemblPlantsGene:HORVU5Hr1G025310	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil	PANTHER:PTHR23244
PANTHER:PTHR23244:SF398	PFAM:PF01344	PFAM:PF13415	SEG:seg	SUPFAM:SSF50965	UniParc:UPI000B471166
UniProt:A0A287QPX8	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:138060502..138068386

Molecular Weight (calculated)

52925.2 Da

IEP (calculated)

4.965

GRAVY (calculated)

-0.486

Length

481 amino acids

Sequence
(BLAST)

001: MPSIQEPLHF KPEEPKVVVA QNEKMVDVQD KEVTMEGLCS VAAYDLWTPL SVPGQRPKPR YKHGAAVVQE KMYVFGGNHN GRYLGDIQVL DFKSLSWSKL
101: EAKIQSESSE SAEPVLVAPC AGHSLIPSGN KALSLAGHTR EHTESLSVKE FDPQTCTWSI LRTYGKSPSS RGGQSVTRIG DTLVVFGGEG DGRSLLNDLH
201: VLDLETMTWD EFESTGTPPS PRSEHAAACY ADRYLLIFGG GSHSTCFSDL YLLDMQTMEW SRPEQHGIIP EPRAGHAGVT VGDNWVITGG GNSKKGVPET
301: LVLNMSTLVW SVVTSFEGRA PPTSEGSSLV LYTINGEDFL LSFGGYSGRY SNEVYVLKTS LRPSLSSSRI DELETNGMTP LSAEVNSSRG PIFEIEKLRD
401: DKNNKGGDIS KTLVQAVKRE KNQVEEKLEQ EKLQSFHLKK ELADVENKNA ELTKELQSVR DQLSDEATRA SKLEDEVSEI Q

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.