CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18797	Canola	cytosol	97.59	97.45
CDY05166	Canola	cytosol, nucleus, plastid	91.13	90.99
CDY27769	Canola	cytosol	90.98	90.84
CDY40708	Canola	cytosol	90.83	90.69
AT3G05420.2	Thale cress	cytosol	90.53	89.99
CDX74147	Canola	cytosol, nucleus, plastid	89.77	89.64
CDY25029	Canola	cytosol, nucleus, plastid	76.09	75.52
CDY05568	Canola	plastid	75.19	74.96
VIT_14s0060g02410.t01	Wine grape	plastid	75.19	74.18
Solyc01g099350.2.1	Tomato	extracellular	72.03	71.6
KRG96823	Soybean	cytosol, plastid	69.47	71.19
KRH68531	Soybean	nucleus	70.23	70.97
PGSC0003DMT400063503	Potato	extracellular	35.64	70.75
KRG92884	Soybean	nucleus	70.08	70.71
Os03t0835600-01	Rice	plastid	63.31	64.27
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	65.11	64.24
EER90565	Sorghum	plastid	63.16	63.73
TraesCS5D01G515900.2	Wheat	plastid	63.61	63.23
TraesCS4A01G356400.2	Wheat	plastid	63.61	63.23
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	63.46	63.08
GSMUA_Achr6P20340_001	Banana	plastid	63.91	62.32
Zm00001d034758_P003	Maize	plastid	61.95	60.5
HORVU5Hr1G117970.2	Barley	plastid	63.16	60.34
Zm00001d046434_P003	Maize	plastid	50.23	54.84
HORVU5Hr1G025310.1	Barley	cytosol	38.65	53.43
TraesCS5D01G106400.1	Wheat	cytosol	41.35	52.28
TraesCS5A01G094000.1	Wheat	cytosol	40.9	51.61
TraesCS5B01G100100.1	Wheat	cytosol	41.05	51.61
Zm00001d012892_P002	Maize	plastid	60.75	51.6
Os12t0540800-01	Rice	extracellular	40.0	50.47
EES16101	Sorghum	cytosol, nucleus, plastid	38.5	47.5
Zm00001d041692_P001	Maize	nucleus	35.94	44.01
CDY58438	Canola	cytosol	32.63	43.14
CDY11290	Canola	cytosol	32.48	42.94
CDY48738	Canola	cytosol	12.03	24.84
CDX85317	Canola	cytosol	11.88	24.53
CDY05697	Canola	cytosol	11.73	24.22
CDX86322	Canola	cytosol	12.18	23.55
CDX96969	Canola	peroxisome	11.88	23.03
CDY28023	Canola	cytosol	11.28	22.94
CDY35957	Canola	cytosol	11.13	22.63
CDY13903	Canola	mitochondrion	22.86	22.55
CDY36630	Canola	cytosol	11.58	22.45
CDY08215	Canola	cytosol	11.73	22.41
CDY30169	Canola	cytosol	10.83	22.29
CDY19142	Canola	cytosol, peroxisome, plastid	11.73	22.22
CDY52048	Canola	plastid	11.73	22.22
CDX94790	Canola	cytosol	11.43	22.16
CDY51408	Canola	cytosol	11.43	22.16
CDX92598	Canola	mitochondrion	23.16	22.0
CDY30681	Canola	cytosol	11.28	21.55
CDY49014	Canola	cytosol	10.98	21.28
CDY56199	Canola	cytosol	12.78	20.58
CDY64894	Canola	cytosol, mitochondrion	7.52	19.38
CDY24063	Canola	cytosol, mitochondrion	8.27	19.37
CDY42440	Canola	mitochondrion	13.98	19.21
CDY67946	Canola	cytosol	10.08	19.09
CDY49133	Canola	mitochondrion, nucleus	13.98	18.98
CDY26745	Canola	nucleus	14.74	18.96
CDY65743	Canola	cytosol, peroxisome, plastid	12.03	18.91
CDX75043	Canola	cytosol	12.93	18.86
CDY20194	Canola	cytosol	13.23	18.84
CDY28366	Canola	cytosol	13.23	18.84
CDY19228	Canola	nucleus	14.44	18.57
CDY43093	Canola	cytosol	2.26	18.52
CDX96712	Canola	mitochondrion	14.59	18.51
CDX83831	Canola	nucleus	14.59	18.16
CDX84132	Canola	cytosol	13.38	17.98
CDX92073	Canola	cytosol	12.63	17.8
CDX75048	Canola	cytosol, plastid	13.23	17.67
CDY03958	Canola	cytosol	12.18	17.38
CDY03963	Canola	cytosol	12.18	17.34
CDY56200	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.73	16.85
CDX73059	Canola	cytosol, mitochondrion	14.14	16.15
CDX96521	Canola	mitochondrion	14.74	15.91
CDY34042	Canola	nucleus	15.19	15.23
CDY60589	Canola	cytosol	14.29	11.99
CDX90875	Canola	cytosol	17.74	11.69
CDY21313	Canola	cytosol	17.44	11.69
CDX75045	Canola	cytosol	13.23	10.49
CDX83165	Canola	nucleus	14.89	9.98
CDY43091	Canola	cytosol	1.5	8.85
CDY72137	Canola	cytosol	1.8	7.79
CDY65828	Canola	cytosol	3.31	6.77

Protein Annotations

Gene3D:1.20.80.10	Gene3D:2.120.10.80	MapMan:35.1	GO:A0A078G1A2	UniProt:A0A078G1A2	InterPro:Acyl-CoA-binding_protein
InterPro:Acyl-CoA-binding_sf	EnsemblPlants:CDY18777	ProteinID:CDY18777	ProteinID:CDY18777.1	ncoils:Coil	InterPro:FERM/acyl-CoA-bd_prot_sf
GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00005935001	InterPro:Gal_Oxase/kelch_b-propeller
InterPro:IPR000582	InterPro:IPR014352	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF00887
PFAM:PF01344	PFAM:PF13415	PFAM:PF13418	PFscan:PS51228	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336
SUPFAM:SSF117281	SUPFAM:SSF47027	SUPFAM:SSF50965	UniParc:UPI0004EC6E7F	SEG:seg	:

Description

BnaAnng02420DAcyl-coA binding protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1A2]

Coordinates

chrLK032089:+:73792..78462

Molecular Weight (calculated)

72909.9 Da

IEP (calculated)

4.948

GRAVY (calculated)

-0.535

Length

665 amino acids

Sequence
(BLAST)

001: MAMARATSGP AYPERFYAAA SYVGFDGSDS SAKHVSSKFS DDTSLILYAL YQQATVGPCN TPKPSAWRPV EQSKWQSWQG LGTMPSIEAM RLFVKILEEE
101: NPSWYSRASN DIPDPVIDVQ INTTKEEPVV ENGNSFSETK TVSAENGHLA ETQDKDVVSE DPNTVFVYNQ WTAPQTSGQR PKPRYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESEETSPTLL SPCAGHSLIP WDNKLLSIGG HTKNPSESMQ VRVFDTHTCT WSMLKTYGKP PVSRGGQSVT
301: VVGKTLVIFG GQDAKRSLLN DLHVLDLETM TWDEVDSIGV SPSPRSDHAA AVHAERYLLI FGGGSHATCF GDLHVLDLQT MEWSRPAQQG EAPTPRSGHA
401: GVTIGENWFI VGGGDNKSGA SESVVLNMST LSWSVIASVE GCVPLASEGL SLVVSSYNGE DVLVAFGGYN GRYNNEINLL KPSHKSTLQQ KTVEAPLPGS
501: LSAVNNATTR DIESEVSQEG RVREIAMDNV SPGSKVEVNN EHIIATLKSE KEELEASLNK EKLQTQQLRQ ELSEAESRNT DLHKELQSDR GQLQAEQSRC
601: FKLEVDVAEL RQKLQTLETL QKELELLQRQ KAASEQASTN AKRQSSGGVW GWLAGSPQEK DDDSP

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.