Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86322 | Canola | cytosol | 98.14 | 91.86 |
| CDY48738 | Canola | cytosol | 90.06 | 90.06 |
| CDY05697 | Canola | cytosol | 89.44 | 89.44 |
| AT5G48180.1 | Thale cress | cytosol | 84.78 | 83.74 |
| KRH43755 | Soybean | cytosol | 55.9 | 54.88 |
| CDY28023 | Canola | cytosol | 54.97 | 54.13 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 54.66 | 53.99 |
| PGSC0003DMT400046550 | Potato | cytosol | 18.94 | 53.98 |
| CDY35957 | Canola | cytosol | 53.73 | 52.91 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 53.42 | 52.6 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 52.8 | 51.2 |
| CDY30169 | Canola | cytosol | 50.62 | 50.46 |
| CDY52048 | Canola | plastid | 54.35 | 49.86 |
| KXG34722 | Sorghum | cytosol | 52.17 | 49.85 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 54.04 | 49.57 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 49.38 | 48.62 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 49.38 | 48.62 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 49.07 | 48.32 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 48.76 | 48.01 |
| CDY51408 | Canola | cytosol | 49.07 | 46.06 |
| CDY36630 | Canola | cytosol | 48.76 | 45.77 |
| CDX96969 | Canola | peroxisome | 48.14 | 45.19 |
| CDX94790 | Canola | cytosol | 47.52 | 44.61 |
| CDY49014 | Canola | cytosol | 47.2 | 44.31 |
| CDY08215 | Canola | cytosol | 47.83 | 44.25 |
| Zm00001d019221_P001 | Maize | cytosol | 52.17 | 43.98 |
| CDY30681 | Canola | cytosol | 45.34 | 41.95 |
| CDY56199 | Canola | cytosol | 51.24 | 39.95 |
| CDY64894 | Canola | cytosol, mitochondrion | 31.99 | 39.92 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 51.55 | 39.24 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.42 | 37.15 |
| CDY43093 | Canola | cytosol | 9.32 | 37.04 |
| CDY03958 | Canola | cytosol | 53.11 | 36.7 |
| CDY20194 | Canola | cytosol | 53.11 | 36.62 |
| CDY28366 | Canola | cytosol | 52.48 | 36.19 |
| CDY03963 | Canola | cytosol | 52.48 | 36.19 |
| CDX92073 | Canola | cytosol | 51.55 | 35.17 |
| CDY24063 | Canola | cytosol, mitochondrion | 29.81 | 33.8 |
| CDY60589 | Canola | cytosol | 51.55 | 20.96 |
| CDX96712 | Canola | mitochondrion | 24.22 | 14.89 |
| CDY42440 | Canola | mitochondrion | 22.36 | 14.88 |
| CDY26745 | Canola | nucleus | 23.6 | 14.7 |
| CDY19228 | Canola | nucleus | 23.6 | 14.7 |
| CDY49133 | Canola | mitochondrion, nucleus | 22.36 | 14.69 |
| CDX75043 | Canola | cytosol | 19.88 | 14.04 |
| CDX83831 | Canola | nucleus | 22.67 | 13.67 |
| CDX84132 | Canola | cytosol | 20.5 | 13.33 |
| CDX75048 | Canola | cytosol, plastid | 20.19 | 13.05 |
| CDY58438 | Canola | cytosol | 20.19 | 12.92 |
| CDY11290 | Canola | cytosol | 20.19 | 12.92 |
| CDX73059 | Canola | cytosol, mitochondrion | 22.36 | 12.37 |
| CDY18797 | Canola | cytosol | 24.84 | 12.01 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 24.84 | 12.01 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 24.84 | 12.01 |
| CDY27769 | Canola | cytosol | 24.84 | 12.01 |
| CDY67946 | Canola | cytosol | 13.04 | 11.97 |
| CDY18777 | Canola | cytosol | 24.53 | 11.88 |
| CDX96521 | Canola | mitochondrion | 22.67 | 11.85 |
| CDY40708 | Canola | cytosol | 24.22 | 11.71 |
| CDY05568 | Canola | plastid | 24.22 | 11.69 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 23.6 | 11.34 |
| CDY34042 | Canola | nucleus | 21.12 | 10.26 |
| CDY13903 | Canola | mitochondrion | 20.5 | 9.79 |
| CDX92598 | Canola | mitochondrion | 20.5 | 9.43 |
| CDX75045 | Canola | cytosol | 19.88 | 7.63 |
| CDX83165 | Canola | nucleus | 21.12 | 6.85 |
| CDY21313 | Canola | cytosol | 19.25 | 6.25 |
| CDX90875 | Canola | cytosol | 19.25 | 6.14 |
| CDY43091 | Canola | cytosol | 0.93 | 2.65 |
| CDY65828 | Canola | cytosol | 2.17 | 2.15 |
| CDY72137 | Canola | cytosol | 0.93 | 1.95 |
Protein Annotations
| EnsemblPlants:CDX85317 | EnsemblPlantsGene:GSBRNA2T00142981001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF351 | PFAM:PF01344 |
| PFAM:PF13964 | ProteinID:CDX85317 | ProteinID:CDX85317.1 | SUPFAM:SSF117281 | UniParc:UPI0004EF25B8 | MapMan:35.1 |
Description
BnaC07g26280D
Coordinates
chrLK031841:-:1180051..1181516
Molecular Weight (calculated)
34799.1 Da
IEP (calculated)
5.206
GRAVY (calculated)
-0.203
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPVADNKWV KVGQKGAGPG PRSSHAITVV GNKVYCFGGE LKPTIHIDND LYVFDLDTQE WSIAPATGDA PFPCFGVSMV PIGTTIYVYG GRDDSRKYNG
101: LHAYDTVANK WELLSPVEEG LPGRSYHSMA GDDRKVYVFG GVTAKGRVNT LHAYDVVDRK WVEYPAAGEA CKGRGAPGLV VVDGKVWVLF GFDGNELGDI
201: HCFGLATGKW TAVETTGDVP PARSVFPAVS SGKYIVIYGG EEEPHELMHM GAGKLSGDVY RFDTETLVWE KVVDGTEEGK NPCPRGWCAF AVAVVNGEKG
301: LLVHGGNSPT NERLDDMVFW GF
101: LHAYDTVANK WELLSPVEEG LPGRSYHSMA GDDRKVYVFG GVTAKGRVNT LHAYDVVDRK WVEYPAAGEA CKGRGAPGLV VVDGKVWVLF GFDGNELGDI
201: HCFGLATGKW TAVETTGDVP PARSVFPAVS SGKYIVIYGG EEEPHELMHM GAGKLSGDVY RFDTETLVWE KVVDGTEEGK NPCPRGWCAF AVAVVNGEKG
301: LLVHGGNSPT NERLDDMVFW GF
001: MCPVENKWLK VGQKGAGPGA RSSHAMTVVG NKVYCFGGEL KPTIHIDNDL YVFDLETQEW SIAPATGEAP FPCFGVSMVT IGSTIYVYGG RDDKRRYNGL
101: HSYDTETNEW KLLAPVEEGL PGRSYHSMAG DDRKVYVFGG VTAKGRVNTL HAYDVVDQKW VEYPAAGEAC KGRGAPGLVV VEGRIWVLFG FDGNELGDIH
201: CFDLASEQWK AVETTGDVPA ARSVFPAVSY GKYIVIYGGE EEPHELMHMG AGKMSGEVYQ LDTETLVWER IVCGNEEEKP SQRGWCAFTK AVKDGEEGLL
301: VHGGNSPTNE RLDDLVFWGF SHLNVN
101: HSYDTETNEW KLLAPVEEGL PGRSYHSMAG DDRKVYVFGG VTAKGRVNTL HAYDVVDQKW VEYPAAGEAC KGRGAPGLVV VEGRIWVLFG FDGNELGDIH
201: CFDLASEQWK AVETTGDVPA ARSVFPAVSY GKYIVIYGGE EEPHELMHMG AGKMSGEVYQ LDTETLVWER IVCGNEEEKP SQRGWCAFTK AVKDGEEGLL
301: VHGGNSPTNE RLDDLVFWGF SHLNVN
Arabidopsis Description
NSP5Nitrile-specifier protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q93XW5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.