Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08215 | Canola | cytosol | 96.84 | 96.84 |
| CDY51408 | Canola | cytosol | 82.47 | 83.67 |
| CDY36630 | Canola | cytosol | 81.32 | 82.51 |
| CDX96969 | Canola | peroxisome | 80.75 | 81.92 |
| CDX94790 | Canola | cytosol | 78.74 | 79.88 |
| CDY49014 | Canola | cytosol | 78.16 | 79.3 |
| AT1G54040.2 | Thale cress | cytosol | 73.56 | 75.07 |
| CDY64894 | Canola | cytosol, mitochondrion | 50.57 | 68.22 |
| CDY43093 | Canola | cytosol | 12.93 | 55.56 |
| CDY30169 | Canola | cytosol | 50.57 | 54.49 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 52.3 | 51.85 |
| CDY52048 | Canola | plastid | 51.72 | 51.28 |
| CDY24063 | Canola | cytosol, mitochondrion | 39.94 | 48.94 |
| CDY28023 | Canola | cytosol | 43.39 | 46.18 |
| CDY35957 | Canola | cytosol | 43.1 | 45.87 |
| CDY48738 | Canola | cytosol | 41.95 | 45.34 |
| CDX85317 | Canola | cytosol | 41.95 | 45.34 |
| PGSC0003DMT400046550 | Potato | cytosol | 14.66 | 45.13 |
| CDY05697 | Canola | cytosol | 41.67 | 45.03 |
| CDY56199 | Canola | cytosol | 52.3 | 44.07 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 40.52 | 43.25 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 41.09 | 43.07 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 39.94 | 42.51 |
| CDX86322 | Canola | cytosol | 41.95 | 42.44 |
| KXG34722 | Sorghum | cytosol | 40.8 | 42.14 |
| KRH43755 | Soybean | cytosol | 39.37 | 41.77 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 50.57 | 41.61 |
| CDY20194 | Canola | cytosol | 54.31 | 40.47 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 37.93 | 40.37 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 37.93 | 40.37 |
| CDY03963 | Canola | cytosol | 54.02 | 40.26 |
| CDY28366 | Canola | cytosol | 53.74 | 40.04 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.16 | 39.96 |
| CDY03958 | Canola | cytosol | 53.16 | 39.7 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 37.07 | 39.45 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 37.07 | 39.45 |
| CDX92073 | Canola | cytosol | 53.16 | 39.19 |
| Zm00001d019221_P001 | Maize | cytosol | 39.94 | 36.39 |
| CDY60589 | Canola | cytosol | 53.16 | 23.36 |
| CDY19228 | Canola | nucleus | 25.0 | 16.83 |
| CDY26745 | Canola | nucleus | 24.71 | 16.63 |
| CDY42440 | Canola | mitochondrion | 22.41 | 16.12 |
| CDX96712 | Canola | mitochondrion | 23.85 | 15.84 |
| CDY49133 | Canola | mitochondrion, nucleus | 22.13 | 15.71 |
| CDX83831 | Canola | nucleus | 23.56 | 15.36 |
| CDX75043 | Canola | cytosol | 20.11 | 15.35 |
| CDY67946 | Canola | cytosol | 15.23 | 15.1 |
| CDX84132 | Canola | cytosol | 20.4 | 14.34 |
| CDX75048 | Canola | cytosol, plastid | 20.11 | 14.06 |
| CDX73059 | Canola | cytosol, mitochondrion | 22.7 | 13.57 |
| CDY58438 | Canola | cytosol | 19.54 | 13.52 |
| CDY11290 | Canola | cytosol | 19.25 | 13.32 |
| CDX96521 | Canola | mitochondrion | 22.99 | 12.99 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 21.84 | 11.41 |
| CDY27769 | Canola | cytosol | 21.84 | 11.41 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 21.84 | 11.41 |
| CDY18797 | Canola | cytosol | 21.84 | 11.41 |
| CDY18777 | Canola | cytosol | 21.55 | 11.28 |
| CDY40708 | Canola | cytosol | 21.26 | 11.11 |
| CDY34042 | Canola | nucleus | 20.98 | 11.01 |
| CDY05568 | Canola | plastid | 20.98 | 10.94 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 20.98 | 10.9 |
| CDY13903 | Canola | mitochondrion | 19.25 | 9.94 |
| CDX92598 | Canola | mitochondrion | 19.25 | 9.57 |
| CDX75045 | Canola | cytosol | 20.11 | 8.34 |
| CDX83165 | Canola | nucleus | 20.69 | 7.26 |
| CDY43091 | Canola | cytosol | 1.72 | 5.31 |
| CDY21313 | Canola | cytosol | 14.66 | 5.14 |
| CDX90875 | Canola | cytosol | 14.66 | 5.05 |
| CDY72137 | Canola | cytosol | 1.44 | 3.25 |
| CDY65828 | Canola | cytosol | 1.72 | 1.85 |
Protein Annotations
| EnsemblPlants:CDY30681 | EnsemblPlantsGene:GSBRNA2T00046010001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF351 | PFAM:PF01344 |
| ProteinID:CDY30681 | ProteinID:CDY30681.1 | SEG:seg | SUPFAM:SSF117281 | UniParc:UPI0004EEFC9B | UniProt:A0A078GYV5 |
| MapMan:9.5.2.3 | : | : | : | : | : |
Description
BnaC06g10450DBnaC06g10450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYV5]
Coordinates
chrLK032257:-:473870..480199
Molecular Weight (calculated)
38702.1 Da
IEP (calculated)
5.148
GRAVY (calculated)
-0.558
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIEAVTPTL QGEWIEVEQK GGEGPGPRSS HGIAVVGDEL YSFGGELTPN ISIGKDLYVF DFKTHTWSIE TGSGDLPNVK ALGTRMVPVG TKLYIFGGRD
101: EHKQFDDFYS YDTVKKEWKF LTKLDEVGGP EARTFHSMAW DDNYWRVSNG CYKGGANKTP VRFRTIEAYN IAEGKWTQLP DPGEQLARFE KRGGAGFLVV
201: QGKIWVVYGF ATSPDPNGKN DYESDHVQFY DPVTQKWTEV ETRGEKPSAR SVFAHAVVGK YILIFGGETW PDPRAHLGPG TLSDEGYALD TETLVWERFG
301: GGDEPSTRGW SAYTTATVYG KKGLLMHGGK LPTNNRTDEL YFYAVNSA
101: EHKQFDDFYS YDTVKKEWKF LTKLDEVGGP EARTFHSMAW DDNYWRVSNG CYKGGANKTP VRFRTIEAYN IAEGKWTQLP DPGEQLARFE KRGGAGFLVV
201: QGKIWVVYGF ATSPDPNGKN DYESDHVQFY DPVTQKWTEV ETRGEKPSAR SVFAHAVVGK YILIFGGETW PDPRAHLGPG TLSDEGYALD TETLVWERFG
301: GGDEPSTRGW SAYTTATVYG KKGLLMHGGK LPTNNRTDEL YFYAVNSA
001: MVAVGTKIYI FGGRDENRNF ENFRSYDTVT SEWTFLTKLD EVGGPEARTF HSMASDENHV YVFGGVSKGG TMNTPTRFRT IEAYNIADGK WAQLPDPGDN
101: FEKRGGAGFA VVQGKIWVVY GFATSIVPGG KDDYESNAVQ FYDPASKKWT EVETTGAKPS ARSVFAHAVV GKYIIIFAGE VWPDLNGHYG PGTLSNEGYA
201: LDTETLVWEK LGEEGAPAIP RGWTAYTAAT VDGKNGLLMH GGKLPTNERT DDLYFYAVNS A
101: FEKRGGAGFA VVQGKIWVVY GFATSIVPGG KDDYESNAVQ FYDPASKKWT EVETTGAKPS ARSVFAHAVV GKYIIIFAGE VWPDLNGHYG PGTLSNEGYA
201: LDTETLVWEK LGEEGAPAIP RGWTAYTAAT VDGKNGLLMH GGKLPTNERT DDLYFYAVNS A
Arabidopsis Description
ESPEpithiospecifier protein [Source:UniProtKB/Swiss-Prot;Acc:Q8RY71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.