CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75043	Canola	cytosol	85.19	65.57
CDX84132	Canola	cytosol	86.04	61.01
CDX75048	Canola	cytosol, plastid	86.32	60.84
AT2G36360.4	Thale cress	cytosol	82.05	55.6
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	60.68	47.87
KRG92046	Soybean	cytosol	65.53	46.18
Zm00001d034759_P001	Maize	cytosol	64.1	45.0
GSMUA_Achr8P07640_001	Banana	cytosol	63.82	44.89
KXG37190	Sorghum	cytosol	64.1	44.82
TraesCS5B01G515900.1	Wheat	mitochondrion	64.1	44.73
Os03t0835800-02	Rice	cytosol	63.82	44.71
TraesCS4A01G356300.1	Wheat	mitochondrion	63.82	44.53
Solyc11g007320.1.1	Tomato	cytosol	63.25	44.31
HORVU5Hr1G117920.1	Barley	cytosol	64.1	43.02
VIT_13s0074g00620.t01	Wine grape	cytosol	68.09	42.99
TraesCS5D01G516000.1	Wheat	mitochondrion	62.11	42.58
CDX75045	Canola	cytosol	86.32	36.11
CDY43093	Canola	cytosol	5.13	22.22
CDY64894	Canola	cytosol, mitochondrion	13.96	18.99
CDY30169	Canola	cytosol	15.38	16.72
CDY28023	Canola	cytosol	14.81	15.9
CDY35957	Canola	cytosol	14.81	15.9
CDY36630	Canola	cytosol	15.38	15.74
CDY08215	Canola	cytosol	15.38	15.52
CDY51408	Canola	cytosol	15.1	15.45
CDY30681	Canola	cytosol	15.1	15.23
CDX96969	Canola	peroxisome	14.53	14.87
CDY48738	Canola	cytosol	13.11	14.29
CDY05697	Canola	cytosol	12.82	13.98
CDY52048	Canola	plastid	13.96	13.96
CDY19142	Canola	cytosol, peroxisome, plastid	13.96	13.96
CDX94790	Canola	cytosol	13.39	13.7
CDY42440	Canola	mitochondrion	18.8	13.64
CDY49014	Canola	cytosol	13.11	13.41
CDY56199	Canola	cytosol	15.67	13.32
CDY49133	Canola	mitochondrion, nucleus	18.23	13.06
CDX85317	Canola	cytosol	11.97	13.04
CDY03963	Canola	cytosol	17.09	12.85
CDY03958	Canola	cytosol	16.24	12.23
CDX86322	Canola	cytosol	11.97	12.21
CDX83831	Canola	nucleus	18.52	12.17
CDY56200	Canola	endoplasmic reticulum, extracellular, plasma membrane	15.95	12.1
CDX92073	Canola	cytosol	16.24	12.08
CDY65743	Canola	cytosol, peroxisome, plastid	14.53	12.06
CDX96712	Canola	mitochondrion	17.95	12.02
CDY26745	Canola	nucleus	17.66	11.99
CDY19228	Canola	nucleus	17.66	11.99
CDY58438	Canola	cytosol	17.09	11.93
CDY11290	Canola	cytosol	17.09	11.93
CDY28366	Canola	cytosol	15.67	11.78
CDY24063	Canola	cytosol, mitochondrion	9.4	11.62
CDY20194	Canola	cytosol	15.38	11.56
CDX73059	Canola	cytosol, mitochondrion	17.95	10.82
CDX96521	Canola	mitochondrion	18.23	10.39
CDY18797	Canola	cytosol	19.66	10.36
CDY05568	Canola	plastid	19.66	10.34
CDX74147	Canola	cytosol, nucleus, plastid	19.37	10.21
CDY25029	Canola	cytosol, nucleus, plastid	19.37	10.15
CDY18777	Canola	cytosol	19.09	10.08
CDY40708	Canola	cytosol	19.09	10.06
CDY34042	Canola	nucleus	18.8	9.95
CDY13903	Canola	mitochondrion	19.09	9.94
CDY27769	Canola	cytosol	18.8	9.91
CDY05166	Canola	cytosol, nucleus, plastid	18.52	9.76
CDX92598	Canola	mitochondrion	18.8	9.43
CDX83165	Canola	nucleus	18.8	6.65
CDY21313	Canola	cytosol	18.52	6.55
CDX90875	Canola	cytosol	18.52	6.44
CDY60589	Canola	cytosol	13.96	6.19
CDY65828	Canola	cytosol	1.14	1.23
CDY72137	Canola	cytosol	0.0	0.0
CDY43091	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY67946	EnsemblPlantsGene:GSBRNA2T00068310001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401	PFAM:PF13415
ProteinID:CDY67946	ProteinID:CDY67946.1	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0004EDBFCB
UniProt:A0A078JQK3	MapMan:35.1	:	:	:	:

Description

BnaAnng25640DBnaAnng25640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQK3]

Coordinates

chrLK036684:-:321..2855

Molecular Weight (calculated)

39192.2 Da

IEP (calculated)

7.191

GRAVY (calculated)

-0.205

Length

351 amino acids

Sequence
(BLAST)

001: MFIFGGRSGG KRLGDFWVLD TDICQWSELT SFGDLPTPRD FSAAAAIGNQ KIVLCGGWDG KKWLSDVYVM DTMSLEWMEL SVSGSLPPPR CGHTATMVEK
101: RLLVFGGRGG GGPIMGDLWA LKGLIDEQRE TPGWTQLKLP GQAPSARCGH TVTSGGHYLL LFGGHGTGGW LSRYDVYYND TIILDRVTAQ WKRLPISNDE
201: PPPPRAYHTM TSIGARHLLI GGFDGKTTFG DHWWLVPEDD PIAKRSSVPQ LRNPPETKES ERELDTVIWS SCLSSSVILA NAVNLAFQLF PLVYFRMCDC
301: VILVLKMLLN EKMAAEALRQ HWKESTPETL QLKELGSLLR DYQRLVTRKY T

Best Arabidopsis Sequence Match ( AT2G36360.3 )
(BLAST)

001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKLRVWSRQ ERGQDGFSIV DLQQKMGISV SSGLRLQIPE ESEDQEFVEL
401: GTRLIEGDVV DERASMIQMA AQALRQHWKQ STPRTLQLKE LGSLLRDYQR LVTRIFTTQS SLTSADFGLP GTKTFTFYHI KSSSELRIND ISKLLEEYKT
501: LVI

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.