Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20194 | Canola | cytosol | 98.07 | 98.07 |
| Bra021175.1-P | Field mustard | cytosol | 54.18 | 97.68 |
| CDY30169 | Canola | cytosol | 61.67 | 89.16 |
| CDY56199 | Canola | cytosol | 77.73 | 87.89 |
| CDX92073 | Canola | cytosol | 83.73 | 82.84 |
| CDY03963 | Canola | cytosol | 82.44 | 82.44 |
| AT3G16400.1 | Thale cress | cytosol | 80.51 | 80.0 |
| AT3G16390.2 | Thale cress | cytosol | 79.02 | 79.02 |
| CDY03958 | Canola | cytosol | 77.94 | 78.11 |
| CDY72137 | Canola | cytosol | 24.84 | 75.32 |
| CDY43093 | Canola | cytosol | 13.06 | 75.31 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 72.81 | 73.43 |
| CDY43091 | Canola | cytosol | 17.34 | 71.68 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 47.54 | 63.25 |
| CDY52048 | Canola | plastid | 47.32 | 62.96 |
| AT3G16410.1 | Thale cress | cytosol | 78.16 | 58.97 |
| CDY08215 | Canola | cytosol | 41.97 | 56.32 |
| CDY51408 | Canola | cytosol | 41.11 | 55.98 |
| CDY36630 | Canola | cytosol | 40.9 | 55.69 |
| CDX96969 | Canola | peroxisome | 40.04 | 54.52 |
| CDY64894 | Canola | cytosol, mitochondrion | 29.76 | 53.88 |
| CDY30681 | Canola | cytosol | 40.04 | 53.74 |
| CDX94790 | Canola | cytosol | 39.4 | 53.64 |
| CDY49014 | Canola | cytosol | 38.97 | 53.06 |
| CDX85317 | Canola | cytosol | 36.19 | 52.48 |
| CDY48738 | Canola | cytosol | 35.97 | 52.17 |
| CDY35957 | Canola | cytosol | 36.19 | 51.68 |
| CDY05697 | Canola | cytosol | 35.55 | 51.55 |
| CDY28023 | Canola | cytosol | 35.76 | 51.07 |
| CDX86322 | Canola | cytosol | 36.4 | 49.42 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 34.48 | 49.39 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 34.48 | 48.49 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 43.9 | 48.46 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 33.62 | 48.01 |
| KRH43755 | Soybean | cytosol | 33.62 | 47.87 |
| KXG34722 | Sorghum | cytosol | 33.62 | 46.59 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 31.91 | 45.57 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 31.91 | 45.57 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 31.48 | 44.95 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 31.26 | 44.65 |
| PGSC0003DMT400046550 | Potato | cytosol | 10.71 | 44.25 |
| Zm00001d019221_P001 | Maize | cytosol | 35.76 | 43.72 |
| CDY24063 | Canola | cytosol, mitochondrion | 26.12 | 42.96 |
| CDY60589 | Canola | cytosol | 60.39 | 35.61 |
| CDY65828 | Canola | cytosol | 11.78 | 16.92 |
| CDY67946 | Canola | cytosol | 11.78 | 15.67 |
| CDX75043 | Canola | cytosol | 15.2 | 15.57 |
| CDX96712 | Canola | mitochondrion | 16.49 | 14.69 |
| CDX84132 | Canola | cytosol | 15.42 | 14.55 |
| CDY26745 | Canola | nucleus | 16.06 | 14.51 |
| CDY19228 | Canola | nucleus | 16.06 | 14.51 |
| CDY42440 | Canola | mitochondrion | 14.99 | 14.46 |
| CDY11290 | Canola | cytosol | 15.42 | 14.31 |
| CDY49133 | Canola | mitochondrion, nucleus | 14.99 | 14.29 |
| CDX75048 | Canola | cytosol, plastid | 15.2 | 14.26 |
| CDY58438 | Canola | cytosol | 15.2 | 14.12 |
| CDX83831 | Canola | nucleus | 15.85 | 13.86 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 19.49 | 13.66 |
| CDY27769 | Canola | cytosol | 19.49 | 13.66 |
| CDY18797 | Canola | cytosol | 19.06 | 13.36 |
| CDY05568 | Canola | plastid | 19.06 | 13.34 |
| CDY18777 | Canola | cytosol | 18.84 | 13.23 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 18.84 | 13.13 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 18.63 | 13.06 |
| CDY40708 | Canola | cytosol | 18.42 | 12.91 |
| CDY13903 | Canola | mitochondrion | 17.34 | 12.02 |
| CDX73059 | Canola | cytosol, mitochondrion | 14.78 | 11.86 |
| CDX92598 | Canola | mitochondrion | 17.34 | 11.57 |
| CDX96521 | Canola | mitochondrion | 15.2 | 11.53 |
| CDY34042 | Canola | nucleus | 15.85 | 11.16 |
| CDX75045 | Canola | cytosol | 15.2 | 8.46 |
| CDX83165 | Canola | nucleus | 15.85 | 7.46 |
| CDY21313 | Canola | cytosol | 14.56 | 6.85 |
| CDX90875 | Canola | cytosol | 14.35 | 6.64 |
Protein Annotations
| Gene3D:2.100.10.30 | Gene3D:2.120.10.80 | MapMan:9.5.2.2 | UniProt:A0A078GS67 | EnsemblPlants:CDY28366 | ProteinID:CDY28366 |
| ProteinID:CDY28366.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0030246 | EnsemblPlantsGene:GSBRNA2T00040172001 |
| InterPro:IPR001229 | InterPro:IPR015915 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf |
| InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF01344 | PFAM:PF01419 | PFAM:PF13415 | PFscan:PS51752 |
| PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | SMART:SM00612 | SMART:SM00915 | SUPFAM:SSF117281 | SUPFAM:SSF51101 |
| UniParc:UPI0004EF27A8 | SEG:seg | : | : | : | : |
Description
BnaC01g35360DBnaC01g35360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS67]
Coordinates
chrLK032218:-:339762..341597
Molecular Weight (calculated)
51223.3 Da
IEP (calculated)
5.241
GRAVY (calculated)
-0.340
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKLEAKGG KKGGVWDDGV HDGIRKIYVG QGQDCIAFVK FEYADGSEVV VGDEHGKKTL LGTEEFEIDA DDYLIYVEAF RDKATEETIV DLKFETYKGK
101: TNKHIETSPG VKFVLHGGKI IGFHGRSSDV LHSLGAYVTF PSTPELQGKW IKVEQKGQAP GLRCSHAIAQ VGNKIYAFGG ELIPNQPIDK DLYVFDLETR
201: TWSISPATRD VPHLSCLGVR MVSIGSTLYV FGGRDASRKY NGFYSFDTTK NEWKLLTPVE EGPIPRSFHS MAANENNVYV FGGVSATERL KNLDAYNIVD
301: QKWVQCATPG ESVSIRGGAG LEVVQGKVWV VYGFNGCEVD DVHYYDPVED KWTQVETFGE KPSARSVFAS AVVGKHIVIF GGEVAMDPQA HVGPGQLIGG
401: TFALDTETLK WERLDKLGED EETPDIRGWS ASTSGTIDGK KGLVMHGGKA QTNGRFDDLF FYGTDSA
101: TNKHIETSPG VKFVLHGGKI IGFHGRSSDV LHSLGAYVTF PSTPELQGKW IKVEQKGQAP GLRCSHAIAQ VGNKIYAFGG ELIPNQPIDK DLYVFDLETR
201: TWSISPATRD VPHLSCLGVR MVSIGSTLYV FGGRDASRKY NGFYSFDTTK NEWKLLTPVE EGPIPRSFHS MAANENNVYV FGGVSATERL KNLDAYNIVD
301: QKWVQCATPG ESVSIRGGAG LEVVQGKVWV VYGFNGCEVD DVHYYDPVED KWTQVETFGE KPSARSVFAS AVVGKHIVIF GGEVAMDPQA HVGPGQLIGG
401: TFALDTETLK WERLDKLGED EETPDIRGWS ASTSGTIDGK KGLVMHGGKA QTNGRFDDLF FYGTDSA
001: MAQKLEAKGG EMGDVWDDGV YENVRKVYVG QAQYGIAFVK FEYVNGSQVV VGDEHGKKTE LGVEEFEIDA DDYIVYVEGY REKVNDMTSE MITFLSIKTF
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA
Arabidopsis Description
NSP1Nitrile-specifier protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDM9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.