Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029671.1-P | Field mustard | cytosol | 37.0 | 100.0 |
| CDY28023 | Canola | cytosol | 97.25 | 97.25 |
| AT3G07720.1 | Thale cress | cytosol | 88.99 | 88.45 |
| PGSC0003DMT400046550 | Potato | cytosol | 23.85 | 69.03 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 66.97 | 66.97 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 66.36 | 66.56 |
| KRH43755 | Soybean | cytosol | 66.67 | 66.46 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 65.14 | 64.16 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 61.16 | 61.16 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 61.16 | 61.16 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 60.86 | 60.86 |
| KXG34722 | Sorghum | cytosol | 62.69 | 60.83 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 60.55 | 60.55 |
| CDY05697 | Canola | cytosol | 54.74 | 55.59 |
| CDY48738 | Canola | cytosol | 54.13 | 54.97 |
| CDX85317 | Canola | cytosol | 52.91 | 53.73 |
| Zm00001d019221_P001 | Maize | cytosol | 62.39 | 53.4 |
| CDX86322 | Canola | cytosol | 52.91 | 50.29 |
| CDY30169 | Canola | cytosol | 48.62 | 49.23 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 51.99 | 48.43 |
| CDX94790 | Canola | cytosol | 50.76 | 48.4 |
| CDY52048 | Canola | plastid | 51.68 | 48.15 |
| CDY49014 | Canola | cytosol | 50.46 | 48.1 |
| CDY51408 | Canola | cytosol | 48.32 | 46.06 |
| CDX96969 | Canola | peroxisome | 48.01 | 45.77 |
| CDY36630 | Canola | cytosol | 47.71 | 45.48 |
| CDY08215 | Canola | cytosol | 47.71 | 44.83 |
| CDY64894 | Canola | cytosol, mitochondrion | 34.56 | 43.8 |
| CDY30681 | Canola | cytosol | 45.87 | 43.1 |
| CDY56199 | Canola | cytosol | 49.24 | 38.98 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 49.85 | 38.53 |
| CDY20194 | Canola | cytosol | 52.6 | 36.83 |
| CDX92073 | Canola | cytosol | 52.29 | 36.23 |
| CDY28366 | Canola | cytosol | 51.68 | 36.19 |
| CDY03963 | Canola | cytosol | 50.76 | 35.55 |
| CDY03958 | Canola | cytosol | 49.85 | 34.98 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.93 | 34.56 |
| CDY24063 | Canola | cytosol, mitochondrion | 29.05 | 33.45 |
| CDY43093 | Canola | cytosol | 8.26 | 33.33 |
| CDY60589 | Canola | cytosol | 51.68 | 21.34 |
| CDY42440 | Canola | mitochondrion | 26.61 | 17.98 |
| CDY26745 | Canola | nucleus | 27.83 | 17.6 |
| CDY19228 | Canola | nucleus | 27.83 | 17.6 |
| CDX96712 | Canola | mitochondrion | 27.52 | 17.18 |
| CDY49133 | Canola | mitochondrion, nucleus | 25.38 | 16.94 |
| CDX83831 | Canola | nucleus | 26.3 | 16.1 |
| CDX75043 | Canola | cytosol | 22.32 | 16.01 |
| CDX84132 | Canola | cytosol | 22.94 | 15.15 |
| CDX75048 | Canola | cytosol, plastid | 22.63 | 14.86 |
| CDY67946 | Canola | cytosol | 15.9 | 14.81 |
| CDX73059 | Canola | cytosol, mitochondrion | 25.69 | 14.43 |
| CDX96521 | Canola | mitochondrion | 26.61 | 14.12 |
| CDY11290 | Canola | cytosol | 21.1 | 13.72 |
| CDY58438 | Canola | cytosol | 21.1 | 13.72 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 23.55 | 11.56 |
| CDY27769 | Canola | cytosol | 23.55 | 11.56 |
| CDY18797 | Canola | cytosol | 23.24 | 11.41 |
| CDY34042 | Canola | nucleus | 22.94 | 11.31 |
| CDY05568 | Canola | plastid | 22.94 | 11.24 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 22.94 | 11.19 |
| CDY18777 | Canola | cytosol | 22.63 | 11.13 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 22.63 | 11.11 |
| CDY40708 | Canola | cytosol | 22.32 | 10.96 |
| CDY13903 | Canola | mitochondrion | 21.71 | 10.53 |
| CDX92598 | Canola | mitochondrion | 21.71 | 10.14 |
| CDX75045 | Canola | cytosol | 22.32 | 8.7 |
| CDX83165 | Canola | nucleus | 22.94 | 7.56 |
| CDY21313 | Canola | cytosol | 20.49 | 6.75 |
| CDX90875 | Canola | cytosol | 20.18 | 6.54 |
| CDY65828 | Canola | cytosol | 2.75 | 2.77 |
| CDY43091 | Canola | cytosol | 0.61 | 1.77 |
| CDY72137 | Canola | cytosol | 0.61 | 1.3 |
Protein Annotations
| EnsemblPlants:CDY35957 | EnsemblPlantsGene:GSBRNA2T00059512001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF351 | PFAM:PF01344 |
| PFAM:PF13415 | PFAM:PF13418 | ProteinID:CDY35957 | ProteinID:CDY35957.1 | SEG:seg | SUPFAM:SSF117281 |
| UniParc:UPI0004EDCA91 | UniProt:A0A078HDR8 | MapMan:35.1 | : | : | : |
Description
BnaA05g29930DBnaA05g29930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDR8]
Coordinates
chrLK032364:+:144916..146741
Molecular Weight (calculated)
35434.2 Da
IEP (calculated)
4.685
GRAVY (calculated)
-0.388
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTPMEGKW VQLKQKGTGP GARSSHAIAL VGNKVYAFGG EFQPRVPVDN HLHVFDLNTL TWSIQEASGD APPPRVGVAM AAVGSIIYFF GGRDENHQEL
101: NELYSFNTST NEWKLLSSGE TGPENRSYHS IATDSQNVYV FGGCGVDGRL KDLWAYNVVD GKWIKFPSPG EGCKGRGGPG LEVVEGRIWV VYGFTGDEAD
201: DVHCFDIAKG EWREVETKGE KPSARSVFST AVVGKQIVIF GGEVDPSDLG HMGAGCFTAE AYGLDTETLE WRKWEDGFGS EEHPGPRGWC AFAAGSRDGK
301: EGLLVYGGNS PSNDRLGDIF FFTPESC
101: NELYSFNTST NEWKLLSSGE TGPENRSYHS IATDSQNVYV FGGCGVDGRL KDLWAYNVVD GKWIKFPSPG EGCKGRGGPG LEVVEGRIWV VYGFTGDEAD
201: DVHCFDIAKG EWREVETKGE KPSARSVFST AVVGKQIVIF GGEVDPSDLG HMGAGCFTAE AYGLDTETLE WRKWEDGFGS EEHPGPRGWC AFAAGSRDGK
301: EGLLVYGGNS PSNDRLGDIF FFTPESC
001: MAATPMEGKW VQLKQKGTGP GARSSHAIAL VGNKMYAFGG EFQPRVPVDN QLYVFDLETQ TWSIQEASGD APPPRVGVAM AAVGPIIYFF GGRDSTHQEL
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK
Arabidopsis Description
AT3g07720/F17A17_6 [Source:UniProtKB/TrEMBL;Acc:Q9S7W4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.