Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72137 | Canola | cytosol | 29.24 | 89.61 |
| Bra022159.1-P | Field mustard | cytosol | 50.0 | 89.39 |
| CDY43091 | Canola | cytosol | 20.76 | 86.73 |
| CDY03963 | Canola | cytosol | 85.59 | 86.51 |
| CDY30169 | Canola | cytosol | 57.84 | 84.52 |
| CDY28366 | Canola | cytosol | 82.84 | 83.73 |
| CDY20194 | Canola | cytosol | 82.63 | 83.51 |
| CDY56199 | Canola | cytosol | 72.67 | 83.05 |
| CDY03958 | Canola | cytosol | 79.45 | 80.47 |
| AT3G16400.1 | Thale cress | cytosol | 80.08 | 80.43 |
| AT3G16390.2 | Thale cress | cytosol | 78.6 | 79.44 |
| CDY43093 | Canola | cytosol | 13.14 | 76.54 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 73.73 | 75.16 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 47.88 | 64.39 |
| CDY52048 | Canola | plastid | 47.25 | 63.53 |
| AT3G16410.1 | Thale cress | cytosol | 77.33 | 58.97 |
| CDY51408 | Canola | cytosol | 40.89 | 56.27 |
| CDY08215 | Canola | cytosol | 40.89 | 55.46 |
| CDY36630 | Canola | cytosol | 40.04 | 55.1 |
| CDX96969 | Canola | peroxisome | 39.41 | 54.23 |
| CDX94790 | Canola | cytosol | 39.19 | 53.94 |
| CDY30681 | Canola | cytosol | 39.19 | 53.16 |
| CDY49014 | Canola | cytosol | 38.35 | 52.77 |
| CDY64894 | Canola | cytosol, mitochondrion | 28.81 | 52.71 |
| CDY48738 | Canola | cytosol | 35.81 | 52.48 |
| CDY35957 | Canola | cytosol | 36.23 | 52.29 |
| CDY05697 | Canola | cytosol | 35.38 | 51.86 |
| CDY28023 | Canola | cytosol | 35.81 | 51.68 |
| CDX85317 | Canola | cytosol | 35.17 | 51.55 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 34.96 | 50.61 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 35.17 | 50.0 |
| KRH43755 | Soybean | cytosol | 34.53 | 49.7 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 33.9 | 48.93 |
| CDX86322 | Canola | cytosol | 35.38 | 48.55 |
| KXG34722 | Sorghum | cytosol | 34.53 | 48.37 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 33.47 | 48.32 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 33.47 | 48.32 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 33.26 | 48.01 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 32.84 | 47.4 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 42.37 | 47.28 |
| Zm00001d019221_P001 | Maize | cytosol | 36.23 | 44.76 |
| PGSC0003DMT400046550 | Potato | cytosol | 10.59 | 44.25 |
| CDY24063 | Canola | cytosol, mitochondrion | 25.85 | 42.96 |
| CDY60589 | Canola | cytosol | 57.42 | 34.22 |
| CDY65828 | Canola | cytosol | 11.65 | 16.92 |
| CDY67946 | Canola | cytosol | 12.08 | 16.24 |
| CDX75043 | Canola | cytosol | 15.47 | 16.01 |
| CDX96712 | Canola | mitochondrion | 17.16 | 15.46 |
| CDX84132 | Canola | cytosol | 15.68 | 14.95 |
| CDY19228 | Canola | nucleus | 16.31 | 14.89 |
| CDY26745 | Canola | nucleus | 16.31 | 14.89 |
| CDY42440 | Canola | mitochondrion | 15.25 | 14.88 |
| CDY49133 | Canola | mitochondrion, nucleus | 15.25 | 14.69 |
| CDX75048 | Canola | cytosol, plastid | 15.47 | 14.66 |
| CDX83831 | Canola | nucleus | 16.31 | 14.42 |
| CDY11290 | Canola | cytosol | 14.83 | 13.92 |
| CDY58438 | Canola | cytosol | 14.62 | 13.72 |
| CDY27769 | Canola | cytosol | 18.22 | 12.91 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 18.22 | 12.91 |
| CDY18797 | Canola | cytosol | 18.01 | 12.76 |
| CDY18777 | Canola | cytosol | 17.8 | 12.63 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 17.8 | 12.61 |
| CDY40708 | Canola | cytosol | 17.58 | 12.46 |
| CDX73059 | Canola | cytosol, mitochondrion | 15.25 | 12.37 |
| CDY05568 | Canola | plastid | 17.37 | 12.29 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 17.37 | 12.24 |
| CDX96521 | Canola | mitochondrion | 15.47 | 11.85 |
| CDY34042 | Canola | nucleus | 16.1 | 11.46 |
| CDY13903 | Canola | mitochondrion | 15.68 | 10.98 |
| CDX92598 | Canola | mitochondrion | 15.68 | 10.57 |
| CDX75045 | Canola | cytosol | 15.47 | 8.7 |
| CDX83165 | Canola | nucleus | 16.1 | 7.66 |
| CDY21313 | Canola | cytosol | 13.35 | 6.35 |
| CDX90875 | Canola | cytosol | 13.35 | 6.24 |
Protein Annotations
| Gene3D:2.100.10.30 | Gene3D:2.120.10.80 | MapMan:9.5.2.2 | EnsemblPlants:CDX92073 | ProteinID:CDX92073 | ProteinID:CDX92073.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0030246 | EnsemblPlantsGene:GSBRNA2T00153753001 | InterPro:IPR001229 |
| InterPro:IPR015915 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | PFAM:PF01344 | PFAM:PF01419 | PFAM:PF13415 | PFscan:PS51752 | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | SMART:SM00612 | SMART:SM00915 | SUPFAM:SSF117281 | SUPFAM:SSF51101 | UniParc:UPI0004EDDA06 |
Description
BnaA05g23340D
Coordinates
chrLK031871:+:26270..28571
Molecular Weight (calculated)
51840.6 Da
IEP (calculated)
4.578
GRAVY (calculated)
-0.296
Length
472 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKLDAKGG EKGDVWDDGV HENVRKVYVG KGQDCIAFIK FEYVDDSEVV VGDEHGEQTQ EVEEFKIDED DYIVYVEAFR ETVTQETIVA LKFETYKGKT
101: NMHIETSPGV KFVLQGGKIV GFHGRSTDVL HSLGAYVSFS STLDSLGNWI KVEQNGEGPG LRCSHAIAQV GNKIYSFGGE FTPNVPIDKD LYVFDLETKS
201: WSIAPATGDI PHLSCLGVRM VSVGSTLYVF GGRDASRNYN GFYSFDTNTN EWKLLTPVEE GPAPRSFHSM AADETNVYVF GGVGATERLK TLDAYNIADQ
301: KWVQCAIPGE SVSIRGGAGL QVVQGKVWVV YGFNGCEIDD VHYYDPVEDK WTQVETFGEK PSARSVFASA VVGKHIVLFG GEIAMDPQAH VGPGQLIDGT
401: FALNTETLKW ERLDKFGGEE ETGLSIHTPD VRGWSASTSG KIDGKKGLLM HGGKAVTNDR FDDLFFYEFD SA
101: NMHIETSPGV KFVLQGGKIV GFHGRSTDVL HSLGAYVSFS STLDSLGNWI KVEQNGEGPG LRCSHAIAQV GNKIYSFGGE FTPNVPIDKD LYVFDLETKS
201: WSIAPATGDI PHLSCLGVRM VSVGSTLYVF GGRDASRNYN GFYSFDTNTN EWKLLTPVEE GPAPRSFHSM AADETNVYVF GGVGATERLK TLDAYNIADQ
301: KWVQCAIPGE SVSIRGGAGL QVVQGKVWVV YGFNGCEIDD VHYYDPVEDK WTQVETFGEK PSARSVFASA VVGKHIVLFG GEIAMDPQAH VGPGQLIDGT
401: FALNTETLKW ERLDKFGGEE ETGLSIHTPD VRGWSASTSG KIDGKKGLLM HGGKAVTNDR FDDLFFYEFD SA
001: MAQKLEAKGG EMGDVWDDGV YENVRKVYVG QAQYGIAFVK FEYVNGSQVV VGDEHGKKTE LGVEEFEIDA DDYIVYVEGY REKVNDMTSE MITFLSIKTF
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA
Arabidopsis Description
NSP1Nitrile-specifier protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDM9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.