Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35957 | Canola | cytosol | 97.25 | 97.25 |
| Bra029671.1-P | Field mustard | cytosol | 35.78 | 96.69 |
| AT3G07720.1 | Thale cress | cytosol | 88.99 | 88.45 |
| PGSC0003DMT400046550 | Potato | cytosol | 23.55 | 68.14 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 67.58 | 67.58 |
| KRH43755 | Soybean | cytosol | 67.58 | 67.38 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 66.36 | 66.56 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 65.14 | 64.16 |
| KXG34722 | Sorghum | cytosol | 63.3 | 61.42 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 61.16 | 61.16 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 61.16 | 61.16 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 60.86 | 60.86 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 60.55 | 60.55 |
| CDY05697 | Canola | cytosol | 55.96 | 56.83 |
| CDY48738 | Canola | cytosol | 55.35 | 56.21 |
| CDX85317 | Canola | cytosol | 54.13 | 54.97 |
| Zm00001d019221_P001 | Maize | cytosol | 62.08 | 53.14 |
| CDX86322 | Canola | cytosol | 54.13 | 51.45 |
| CDX94790 | Canola | cytosol | 51.07 | 48.69 |
| CDY30169 | Canola | cytosol | 48.01 | 48.61 |
| CDY49014 | Canola | cytosol | 50.76 | 48.4 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 51.38 | 47.86 |
| CDY52048 | Canola | plastid | 51.07 | 47.58 |
| CDY51408 | Canola | cytosol | 48.32 | 46.06 |
| CDX96969 | Canola | peroxisome | 48.01 | 45.77 |
| CDY36630 | Canola | cytosol | 47.71 | 45.48 |
| CDY08215 | Canola | cytosol | 48.01 | 45.11 |
| CDY64894 | Canola | cytosol, mitochondrion | 34.56 | 43.8 |
| CDY30681 | Canola | cytosol | 46.18 | 43.39 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 50.15 | 38.77 |
| CDY56199 | Canola | cytosol | 48.62 | 38.5 |
| CDY20194 | Canola | cytosol | 51.99 | 36.4 |
| CDX92073 | Canola | cytosol | 51.68 | 35.81 |
| CDY28366 | Canola | cytosol | 51.07 | 35.76 |
| CDY03963 | Canola | cytosol | 50.15 | 35.12 |
| CDY03958 | Canola | cytosol | 49.85 | 34.98 |
| CDY43093 | Canola | cytosol | 8.56 | 34.57 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.93 | 34.56 |
| CDY24063 | Canola | cytosol, mitochondrion | 29.36 | 33.8 |
| CDY60589 | Canola | cytosol | 51.99 | 21.46 |
| CDY42440 | Canola | mitochondrion | 27.22 | 18.39 |
| CDY26745 | Canola | nucleus | 28.44 | 17.99 |
| CDY19228 | Canola | nucleus | 28.44 | 17.99 |
| CDX96712 | Canola | mitochondrion | 28.13 | 17.56 |
| CDY49133 | Canola | mitochondrion, nucleus | 25.99 | 17.35 |
| CDX83831 | Canola | nucleus | 26.91 | 16.48 |
| CDX75043 | Canola | cytosol | 22.32 | 16.01 |
| CDX84132 | Canola | cytosol | 22.94 | 15.15 |
| CDX75048 | Canola | cytosol, plastid | 22.63 | 14.86 |
| CDY67946 | Canola | cytosol | 15.9 | 14.81 |
| CDX73059 | Canola | cytosol, mitochondrion | 26.3 | 14.78 |
| CDX96521 | Canola | mitochondrion | 27.22 | 14.45 |
| CDY11290 | Canola | cytosol | 21.41 | 13.92 |
| CDY58438 | Canola | cytosol | 21.41 | 13.92 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 23.85 | 11.71 |
| CDY27769 | Canola | cytosol | 23.85 | 11.71 |
| CDY34042 | Canola | nucleus | 23.55 | 11.61 |
| CDY18797 | Canola | cytosol | 23.55 | 11.56 |
| CDY05568 | Canola | plastid | 23.24 | 11.39 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 23.24 | 11.34 |
| CDY18777 | Canola | cytosol | 22.94 | 11.28 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 22.94 | 11.26 |
| CDY40708 | Canola | cytosol | 22.63 | 11.11 |
| CDY13903 | Canola | mitochondrion | 22.32 | 10.83 |
| CDX92598 | Canola | mitochondrion | 22.32 | 10.43 |
| CDX75045 | Canola | cytosol | 22.32 | 8.7 |
| CDX83165 | Canola | nucleus | 23.55 | 7.76 |
| CDY21313 | Canola | cytosol | 21.41 | 7.06 |
| CDX90875 | Canola | cytosol | 21.1 | 6.84 |
| CDY65828 | Canola | cytosol | 2.45 | 2.46 |
| CDY43091 | Canola | cytosol | 0.61 | 1.77 |
| CDY72137 | Canola | cytosol | 0.61 | 1.3 |
Protein Annotations
| EnsemblPlants:CDY28023 | EnsemblPlantsGene:GSBRNA2T00038958001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF405 | PFAM:PF01344 |
| PFAM:PF13415 | PFAM:PF13418 | ProteinID:CDY28023 | ProteinID:CDY28023.1 | SEG:seg | SUPFAM:SSF117281 |
| UniParc:UPI0004EE4A72 | UniProt:A0A078GTT2 | MapMan:35.1 | : | : | : |
Description
BnaC05g44250DBnaC05g44250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTT2]
Coordinates
chrLK032213:-:290676..292593
Molecular Weight (calculated)
35528.2 Da
IEP (calculated)
4.533
GRAVY (calculated)
-0.407
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTPMEGKW VQLKQKGTGP GARSSHAIAL VGNKVYAFGG EFQPRVPVDN HLHVFDLSTL TWSIQEASGD APPPRVGVAM AAVGTIIYFF GGRDENHQEL
101: NELYSFDTST NEWKLLSSGE TGPENRSYHS IATDSQNVYV FGGCGVDGRL NDLWAYNVVD GKWIKFPSPG EGCKGRGGPG LEVVEGRIWV VYGFTGDEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST SLVGKQIVIF GGEVDPSDLG HMGAGCFTAE AYGLDTETLE WRKWEDGFGS EEHPGPRGWC AFAAGSRDGK
301: EGLLVYGGNS PSNDRLDDIF FFTPESY
101: NELYSFDTST NEWKLLSSGE TGPENRSYHS IATDSQNVYV FGGCGVDGRL NDLWAYNVVD GKWIKFPSPG EGCKGRGGPG LEVVEGRIWV VYGFTGDEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST SLVGKQIVIF GGEVDPSDLG HMGAGCFTAE AYGLDTETLE WRKWEDGFGS EEHPGPRGWC AFAAGSRDGK
301: EGLLVYGGNS PSNDRLDDIF FFTPESY
001: MAATPMEGKW VQLKQKGTGP GARSSHAIAL VGNKMYAFGG EFQPRVPVDN QLYVFDLETQ TWSIQEASGD APPPRVGVAM AAVGPIIYFF GGRDSTHQEL
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK
Arabidopsis Description
AT3g07720/F17A17_6 [Source:UniProtKB/TrEMBL;Acc:Q9S7W4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.