Factsheet for Bra029671.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
cytosol 2
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046550	Potato	cytosol	61.98	66.37
Bra020713.1-P	Field mustard	cytosol	52.07	52.94
CDY35957	Canola	cytosol	100.0	37.0
CDY28023	Canola	cytosol	96.69	35.78
AT3G07720.1	Thale cress	cytosol	89.26	32.83
Solyc05g024410.2.1	Tomato	cytosol, extracellular, plastid	66.94	24.85
Os09t0249000-01	Rice	cytosol, plasma membrane, plastid	63.64	23.19
VIT_12s0057g01080.t01	Wine grape	cytosol	61.98	22.94
TraesCS5B01G165000.1	Wheat	mitochondrion	60.33	22.32
TraesCS5D01G172400.1	Wheat	mitochondrion	59.5	22.02
HORVU5Hr1G051310.1	Barley	cytosol, mitochondrion, peroxisome	59.5	22.02
KXG34722	Sorghum	cytosol	61.16	21.96
TraesCS5A01G168200.1	Wheat	mitochondrion	58.68	21.71
KRH43755	Soybean	cytosol	58.68	21.65
Bra022157.1-P	Field mustard	cytosol	22.31	21.43
Bra021175.1-P	Field mustard	cytosol	44.63	20.85
Zm00001d019221_P001	Maize	cytosol	62.81	19.9
Bra039702.1-P	Field mustard	cytosol	41.32	19.01
Bra037506.1-P	Field mustard	cytosol	49.59	18.63
Bra037958.1-P	Field mustard	cytosol	38.84	17.87
Bra022159.1-P	Field mustard	cytosol	28.93	13.26
Bra040923.1-P	Field mustard	cytosol	42.98	10.22
Bra018944.1-P	Field mustard	cytosol	49.59	7.58
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	15.7	5.21
Bra025672.1-P	Field mustard	nucleus	20.66	4.84
Bra008135.1-P	Field mustard	mitochondrion, nucleus	19.01	4.7
Bra016550.1-P	Field mustard	mitochondrion	19.83	4.58
Bra005805.1-P	Field mustard	cytosol	18.18	4.37
Bra005279.1-P	Field mustard	cytosol	11.57	4.27
Bra040219.1-P	Field mustard	cytosol	23.14	4.21
Bra039439.1-P	Field mustard	cytosol	22.31	4.05
Bra001147.1-P	Field mustard	cytosol	22.31	3.95
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	21.49	3.9
Bra005274.1-P	Field mustard	cytosol	11.57	3.75
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	19.83	3.6
Bra002170.1-P	Field mustard	mitochondrion	19.01	3.29
Bra040844.1-P	Field mustard	cytosol	3.31	3.01
Bra000617.1-P	Field mustard	endoplasmic reticulum	21.49	2.73
Bra005272.1-P	Field mustard	cytosol	11.57	2.43
Bra000803.1-P	Field mustard	cytosol	16.53	2.03
Bra018943.1-P	Field mustard	cytosol	3.31	1.99

Protein Annotations

EnsemblPlants:Bra029671.1	EnsemblPlants:Bra029671.1-P	EnsemblPlantsGene:Bra029671	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0010043	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller
SUPFAM:SSF50965	UniParc:UPI0002547ED0	UniProt:M4ELK3	MapMan:35.1	:	:

Description

AT3G07720 (E=6e-057) | kelch repeat-containing protein

Coordinates

chrA05:-:22713356..22714960

Molecular Weight (calculated)

12970.0 Da

IEP (calculated)

4.342

GRAVY (calculated)

-0.373

Length

121 amino acids

Sequence
(BLAST)

001: MASTPMEGKW VQGEKPSARS VFSTAVVGKQ IVIFGGEVDP SDLGHMGAGC FTAEAYGLDT ETLEWRKWED GFGSEEHPGP RGWCAFAAGS RDGKEGLLVY
101: GGNSPSNDRL GDIFFFTPES C

Best Arabidopsis Sequence Match ( AT3G07720.1 )
(BLAST)

001: MAATPMEGKW VQLKQKGTGP GARSSHAIAL VGNKMYAFGG EFQPRVPVDN QLYVFDLETQ TWSIQEASGD APPPRVGVAM AAVGPIIYFF GGRDSTHQEL
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK

Arabidopsis Description

AT3g07720/F17A17_6 [Source:UniProtKB/TrEMBL;Acc:Q9S7W4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.