Factsheet for Bra040923.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56200	Canola	endoplasmic reticulum, extracellular, plasma membrane	86.44	95.03
Bra022157.1-P	Field mustard	cytosol	23.18	93.65
Bra022159.1-P	Field mustard	cytosol	39.88	76.89
Bra021175.1-P	Field mustard	cytosol	38.7	76.06
AT3G16400.1	Thale cress	cytosol	67.39	72.98
AT3G16390.2	Thale cress	cytosol	65.23	71.09
Bra039702.1-P	Field mustard	cytosol	28.29	54.75
AT3G16410.1	Thale cress	cytosol	65.82	54.12
Bra037958.1-P	Field mustard	cytosol	27.5	53.23
Bra037506.1-P	Field mustard	cytosol	33.6	53.11
Os09t0249000-01	Rice	cytosol, plasma membrane, plastid	31.43	48.19
Solyc05g024410.2.1	Tomato	cytosol, extracellular, plastid	30.65	47.85
KXG34722	Sorghum	cytosol	31.43	47.48
VIT_12s0057g01080.t01	Wine grape	cytosol	30.06	46.79
KRH43755	Soybean	cytosol	29.67	46.04
TraesCS5D01G172400.1	Wheat	mitochondrion	28.88	44.95
HORVU5Hr1G051310.1	Barley	cytosol, mitochondrion, peroxisome	28.68	44.65
TraesCS5B01G165000.1	Wheat	mitochondrion	28.29	44.04
TraesCS5A01G168200.1	Wheat	mitochondrion	28.29	44.04
Bra020713.1-P	Field mustard	cytosol	10.22	43.7
Zm00001d019221_P001	Maize	cytosol	32.61	43.46
Bra029671.1-P	Field mustard	cytosol	10.22	42.98
PGSC0003DMT400046550	Potato	cytosol	9.43	42.48
Bra018943.1-P	Field mustard	cytosol	13.36	33.83
Bra018944.1-P	Field mustard	cytosol	50.88	32.7
Bra040844.1-P	Field mustard	cytosol	4.13	15.79
Bra016550.1-P	Field mustard	mitochondrion	15.52	15.08
Bra025672.1-P	Field mustard	nucleus	15.13	14.89
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	10.61	14.79
Bra005274.1-P	Field mustard	cytosol	10.81	14.75
Bra008135.1-P	Field mustard	mitochondrion, nucleus	14.15	14.72
Bra005279.1-P	Field mustard	cytosol	9.23	14.33
Bra005805.1-P	Field mustard	cytosol	12.97	13.12
Bra039439.1-P	Field mustard	cytosol	16.9	12.89
Bra040219.1-P	Field mustard	cytosol	16.31	12.48
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	15.91	12.14
Bra001147.1-P	Field mustard	cytosol	16.11	12.01
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	14.34	10.94
Bra002170.1-P	Field mustard	mitochondrion	14.73	10.71
Bra005272.1-P	Field mustard	cytosol	10.81	9.55
Bra000617.1-P	Field mustard	endoplasmic reticulum	15.13	8.08
Bra000803.1-P	Field mustard	cytosol	12.57	6.48

Protein Annotations

Gene3D:2.100.10.30	Gene3D:2.120.10.80	MapMan:9.5.2.2	EnsemblPlantsGene:Bra040923	EnsemblPlants:Bra040923.1	EnsemblPlants:Bra040923.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0030246	InterPro:IPR001229	InterPro:IPR015915
InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
UniProt:M4FIJ4	PFAM:PF01344	PFAM:PF01419	PFAM:PF13415	PFscan:PS51752	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	SMART:SM00612	SMART:SM00915	SUPFAM:SSF117281	SUPFAM:SSF51101	UniParc:UPI000253EA6A
SEG:seg	:	:	:	:	:

Description

AT3G16400 (E=2e-173) ATMLP-470, NSP1, ATNSP1 | NSP1 (NITRILE SPECIFIER PROTEIN 1)

Coordinates

chrScaffold000314:+:17438..22625

Molecular Weight (calculated)

55948.1 Da

IEP (calculated)

6.074

GRAVY (calculated)

-0.354

Length

509 amino acids

Sequence
(BLAST)

001: MAQKLDAKGG KQGNAWDDGV HENVRKVYLG KGPDCIAFVK FEYVDGTNVV IGDEHGEKTQ EVEEFVVDVD DYIVYVEAFR ETATQETIVD LKFETCKGKT
101: NKHFTTSPGV KFVLQGGKIV GFHGRSTNVL HALGAYVSDP ISTFQLHGKW TKVEQKGKAP GLRCSHAIAQ VGNKIYSFGG EFTPNVPIDK DLYVFDLKTG
201: KWSIAPATGD IPHLSCLGVR MVSVGTNLYV FGGRDAVRKY NAFYSYDTTK NVWKLLTPLE EGPTPRSFHS MAADDKNVYV FGGVSSTTRV KTLDVYNIAD
301: KKWKPCATPG EAFSIRGGSG LEVVNGKVWV VYGFNNYEID DIYCYNPIGD KWTQVETTGE QPSGRSVFAS AVVGKYIVIF GGEVDMDPEA HVGPGQLMDG
401: TFALDTETLK WERLDKLGEE KEVEGTTSGS SGLSIHIGIP ILIDVDVSIG NPFGGHKDKK KEEKQVTPEI RGWTASTSAT INGKKGLLMH GGKAQTNDRF
501: DDLYFYEFQ

Best Arabidopsis Sequence Match ( AT3G16400.2 )
(BLAST)

001: MAQKLEAKGG EMGDVWDDGV YENVRKVYVG QAQYGIAFVK FEYVNGSQVV VGDEHGKKTE LGVEEFEIDA DDYIVYVEGY REKVNDMTSE MITFLSIKTF
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA

Arabidopsis Description

NSP1Nitrile-specifier protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDM9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.