Factsheet for Bra040219.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18797	Canola	cytosol	97.89	97.75
Bra039439.1-P	Field mustard	cytosol	90.23	89.95
AT3G05420.2	Thale cress	cytosol	89.92	89.39
Bra001147.1-P	Field mustard	cytosol	89.32	86.97
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	75.49	75.26
VIT_14s0060g02410.t01	Wine grape	plastid	74.74	73.74
Solyc01g099350.2.1	Tomato	extracellular	71.73	71.3
KRG96823	Soybean	cytosol, plastid	69.32	71.03
KRG92884	Soybean	nucleus	69.92	70.56
KRH68531	Soybean	nucleus	69.77	70.52
PGSC0003DMT400063503	Potato	extracellular	35.34	70.15
Os03t0835600-01	Rice	plastid	63.16	64.12
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	64.96	64.09
EER90565	Sorghum	plastid	63.01	63.58
TraesCS4A01G356400.2	Wheat	plastid	63.61	63.23
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	63.46	63.08
TraesCS5D01G515900.2	Wheat	plastid	63.46	63.08
GSMUA_Achr6P20340_001	Banana	plastid	63.61	62.02
Zm00001d034758_P003	Maize	plastid	62.11	60.65
HORVU5Hr1G117970.2	Barley	plastid	63.16	60.34
Zm00001d046434_P003	Maize	plastid	50.08	54.68
HORVU5Hr1G025310.1	Barley	cytosol	38.95	53.85
TraesCS5D01G106400.1	Wheat	cytosol	41.65	52.66
TraesCS5A01G094000.1	Wheat	cytosol	41.2	51.99
TraesCS5B01G100100.1	Wheat	cytosol	41.35	51.98
Zm00001d012892_P002	Maize	plastid	60.6	51.47
Os12t0540800-01	Rice	extracellular	40.0	50.47
EES16101	Sorghum	cytosol, nucleus, plastid	38.65	47.68
Zm00001d041692_P001	Maize	nucleus	36.39	44.57
Bra005805.1-P	Field mustard	cytosol	32.48	42.94
Bra037506.1-P	Field mustard	cytosol	11.88	24.53
Bra029671.1-P	Field mustard	cytosol	4.21	23.14
Bra020713.1-P	Field mustard	cytosol	4.06	22.69
Bra002170.1-P	Field mustard	mitochondrion	22.71	21.57
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	10.68	19.45
Bra039702.1-P	Field mustard	cytosol	7.67	19.39
Bra037958.1-P	Field mustard	cytosol	7.67	19.39
Bra040844.1-P	Field mustard	cytosol	3.76	18.8
Bra005274.1-P	Field mustard	cytosol	10.53	18.77
Bra025672.1-P	Field mustard	nucleus	14.29	18.38
Bra008135.1-P	Field mustard	mitochondrion, nucleus	13.38	18.2
Bra016550.1-P	Field mustard	mitochondrion	14.29	18.13
Bra018943.1-P	Field mustard	cytosol	5.41	17.91
Bra005279.1-P	Field mustard	cytosol	8.42	17.07
Bra040923.1-P	Field mustard	cytosol	12.48	16.31
Bra021175.1-P	Field mustard	cytosol	5.86	15.06
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	14.44	14.39
Bra005272.1-P	Field mustard	cytosol	11.58	13.37
Bra022157.1-P	Field mustard	cytosol	2.41	12.7
Bra000803.1-P	Field mustard	cytosol	17.89	12.06
Bra018944.1-P	Field mustard	cytosol	14.14	11.87
Bra000617.1-P	Field mustard	endoplasmic reticulum	15.19	10.6
Bra022159.1-P	Field mustard	cytosol	4.06	10.23

Protein Annotations

Gene3D:1.20.80.10	Gene3D:2.120.10.80	MapMan:35.1	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	EnsemblPlantsGene:Bra040219
EnsemblPlants:Bra040219.1	EnsemblPlants:Bra040219.1-P	ncoils:Coil	InterPro:FERM/acyl-CoA-bd_prot_sf	GO:GO:0000062	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000582	InterPro:IPR014352	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	UniProt:M4FGJ1	PFAM:PF00887	PFAM:PF01344	PFAM:PF13415	PFAM:PF13418
PFscan:PS51228	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SUPFAM:SSF117281	SUPFAM:SSF47027	UniParc:UPI000253EC09
SEG:seg	:	:	:	:	:

Description

AT3G05420 (E=0.0) ACBP4 | ACBP4 (ACYL-COA BINDING PROTEIN 4); acyl-CoA binding

Coordinates

chrScaffold000191:-:165651..169966

Molecular Weight (calculated)

72853.8 Da

IEP (calculated)

4.997

GRAVY (calculated)

-0.531

Length

665 amino acids

Sequence
(BLAST)

001: MAMARATSGP AYPERFYAAA SYVGFDGSDS SAKHVSSKFS DDTSLILYAL YQQATVGPCN TPKPSAWRPV EQSKWQSWQG LGTMPSIEAM RLFVKVLEEE
101: NPSWYSRASN DIPDPVVDVQ ISTTKDEPVV ENGNSFSETK TVSAENGHLA ETQDKDVVSE DPNTVFVYNQ WTAPQTSGQR PKPRYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRGETKVAT ESEETFPTLL SPCAGHSLIP WDNKLLSIGG HTKNPSESMQ VRVFDAHTCT WSMLKTYGKP PVSRGGQSVT
301: VVGKTLVIFG GQDAKRSLLN DLHVLDLETM TWDEVDSIGV SPSPRSDHAA AVHAERYLLI FGGGSHATCF GDLHVLDLQT MEWSRPAQQG EAPTARSGHA
401: GVTIGENWFI IGGGDNKSGA SESVVLNMST LSWSVIASVE GRVPLASEGL SLVVSSYNGE DVLVAFGGYN GRYNNEINLL KPSHKSTLQQ KTIEAPLPGS
501: LSAVNNATTR DIESEVSQEG RVREIAMDNV SPGSKVEVNN EHIIATLKSE KEELEASLNK EKLQTQQLRQ ELSEAESRNA DLHKELQSDR GQLQAEQSRC
601: FKLEVDVAEL RQKLQTLETL QKELELLQRQ KAASEQASTN AKRQSSGGVW GWLAGSPQEK DDDSP

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.