Factsheet for AT3G05420.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05166	Canola	cytosol, nucleus, plastid	91.63	92.04
CDY27769	Canola	cytosol	91.48	91.89
Bra039439.1-P	Field mustard	cytosol	91.18	91.45
CDY18777	Canola	cytosol	89.99	90.53
CDY40708	Canola	cytosol	89.84	90.24
CDY18797	Canola	cytosol	89.54	89.94
Bra040219.1-P	Field mustard	cytosol	89.39	89.92
CDX74147	Canola	cytosol, nucleus, plastid	88.04	88.44
Bra001147.1-P	Field mustard	cytosol	88.04	86.24
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	80.72	80.84
VIT_14s0060g02410.t01	Wine grape	plastid	76.23	75.67
KRG96823	Soybean	cytosol, plastid	71.15	73.34
Solyc01g099350.2.1	Tomato	extracellular	72.5	72.5
KRH68531	Soybean	nucleus	71.3	72.49
KRG92884	Soybean	nucleus	71.15	72.23
PGSC0003DMT400063503	Potato	extracellular	35.58	71.04
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	66.67	66.17
Os03t0835600-01	Rice	plastid	63.83	65.19
EER90565	Sorghum	plastid	63.98	64.95
TraesCS4A01G356400.2	Wheat	plastid	64.57	64.57
TraesCS5D01G515900.2	Wheat	plastid	64.57	64.57
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	64.42	64.42
GSMUA_Achr6P20340_001	Banana	plastid	63.83	62.61
Zm00001d034758_P003	Maize	plastid	62.93	61.82
HORVU5Hr1G117970.2	Barley	plastid	63.98	61.49
Zm00001d046434_P003	Maize	plastid	50.52	55.5
HORVU5Hr1G025310.1	Barley	cytosol	37.97	52.81
Zm00001d012892_P002	Maize	plastid	61.44	52.49
TraesCS5D01G106400.1	Wheat	cytosol	40.66	51.71
TraesCS5A01G094000.1	Wheat	cytosol	40.51	51.42
TraesCS5B01G100100.1	Wheat	cytosol	40.21	50.85
Os12t0540800-01	Rice	extracellular	39.91	50.66
EES16101	Sorghum	cytosol, nucleus, plastid	38.56	47.87
Zm00001d041692_P001	Maize	nucleus	36.17	44.57
AT5G04420.3	Thale cress	cytosol	33.33	43.39
AT5G48180.1	Thale cress	cytosol	11.81	24.23
AT3G07720.1	Thale cress	cytosol	11.21	22.8
AT5G18590.1	Thale cress	mitochondrion	23.02	21.75
AT1G54040.2	Thale cress	cytosol	10.76	21.11
AT2G33070.3	Thale cress	cytosol	13.0	18.39
AT3G16400.1	Thale cress	cytosol	12.86	18.3
AT3G16390.2	Thale cress	cytosol	12.41	17.77
AT1G18610.2	Thale cress	cytosol	14.65	17.63
AT1G74150.1	Thale cress	cytosol, mitochondrion	14.65	17.22
AT2G36360.4	Thale cress	cytosol	13.0	16.8
AT5G50310.1	Thale cress	nucleus	15.25	15.32
AT3G16410.1	Thale cress	cytosol	13.6	14.7
AT4G04670.1	Thale cress	cytosol	17.79	11.96

Protein Annotations

Gene3D:1.20.80.10	Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:819707	Symbol:ACBP4	ProteinID:AEE74238.1
ArrayExpress:AT3G05420	EnsemblPlantsGene:AT3G05420	RefSeq:AT3G05420	TAIR:AT3G05420	RefSeq:AT3G05420-TAIR-G	EnsemblPlants:AT3G05420.2
TAIR:AT3G05420.2	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	Unigene:At.28183	ncoils:Coil	InterPro:FERM/acyl-CoA-bd_prot_sf
GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000582	InterPro:IPR014352
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	RefSeq:NP_974227.1	PFAM:PF00887	PFAM:PF01344
PFAM:PF13415	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009001
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	PFscan:PS51228	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SUPFAM:SSF117281	SUPFAM:SSF47027
UniParc:UPI0000196B26	SEG:seg	:	:	:	:

Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]

Coordinates

chr3:+:1561671..1567336

Molecular Weight (calculated)

73206.8 Da

IEP (calculated)

4.947

GRAVY (calculated)

-0.479

Length

669 amino acids

Sequence
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INQRAKDEPV VENGSTFSET KTISTENGRL AETQDKDVVS EDSNTVSVYN QWTAPQTSGQ RPKARYEHGA AVIQDKMYIY
201: GGNHNGRYLG DLHVLDLKSW TWSRVETKVA TESQETSTPT LLAPCAGHSL IAWDNKLLSI GGHTKDPSES MQVKVFDPHT ITWSMLKTYG KPPVSRGGQS
301: VTMVGKTLVI FGGQDAKRSL LNDLHILDLD TMTWDEIDAV GVSPSPRSDH AAAVHAERFL LIFGGGSHAT CFDDLHVLDL QTMEWSRPAQ QGDAPTPRAG
401: HAGVTIGENW FIVGGGDNKS GASESVVLNM STLAWSVVAS VQGRVPLASE GLSLVVSSYN GEDVLVAFGG YNGRYNNEIN LLKPSHKSTL QTKTLEAPLP
501: GSLSAVNNAT TRDIESEVEV SQEGRVREIV MDNVNPGSKV EGNSERIIAT IKSEKEELEA SLNKERMQTL QLRQELGEAE LRNTDLYKEL QSVRGQLAAE
601: QSRCFKLEVD VAELRQKLQT LETLQKELEL LQRQKAASEQ AAMNAKRQGS GGVWGWLAGS PQEKDDDSP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.