Factsheet for Zm00001d012892_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90565	Sorghum	plastid	78.16	92.87
Zm00001d034758_P003	Maize	plastid	75.22	86.49
Os03t0835600-01	Rice	plastid	69.22	82.75
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	68.97	80.72
TraesCS4A01G356400.2	Wheat	plastid	68.97	80.72
TraesCS5D01G515900.2	Wheat	plastid	68.84	80.57
HORVU5Hr1G117970.2	Barley	plastid	68.33	76.87
Zm00001d046434_P003	Maize	plastid	58.11	74.71
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	60.92	70.77
GSMUA_Achr6P20340_001	Banana	plastid	56.96	65.4
VIT_14s0060g02410.t01	Wine grape	plastid	56.19	65.28
PGSC0003DMT400063503	Potato	extracellular	27.08	63.28
Solyc01g099350.2.1	Tomato	extracellular	53.64	62.78
Bra039439.1-P	Field mustard	cytosol	52.87	62.07
CDY27769	Canola	cytosol	52.75	62.01
CDY05166	Canola	cytosol, nucleus, plastid	52.75	62.01
AT3G05420.2	Thale cress	cytosol	52.49	61.44
KRH68531	Soybean	nucleus	51.34	61.09
CDY40708	Canola	cytosol	51.72	60.81
CDY18797	Canola	cytosol	51.72	60.81
CDY18777	Canola	cytosol	51.6	60.75
Bra040219.1-P	Field mustard	cytosol	51.47	60.6
KRG96823	Soybean	cytosol, plastid	50.06	60.4
KRG92884	Soybean	nucleus	50.32	59.79
CDX74147	Canola	cytosol, nucleus, plastid	50.57	59.46
CDY05568	Canola	plastid	50.32	59.07
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	50.06	58.68
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	49.81	58.47
Bra001147.1-P	Field mustard	cytosol	50.83	58.27
CDY25029	Canola	cytosol, nucleus, plastid	49.68	58.06
Zm00001d041692_P001	Maize	nucleus	33.72	48.62
Zm00001d051876_P002	Maize	nucleus	25.8	34.01
Zm00001d048718_P010	Maize	mitochondrion	20.43	23.02
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	20.56	21.05
Zm00001d019221_P001	Maize	cytosol	9.96	20.42
Zm00001d034759_P001	Maize	cytosol	12.26	19.2
Zm00001d040606_P001	Maize	cytosol	15.2	19.19
Zm00001d009123_P001	Maize	cytosol	14.3	17.92
Zm00001d037558_P001	Maize	cytosol	2.04	13.22
Zm00001d003259_P006	Maize	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	11.88	13.1
Zm00001d038406_P001	Maize	cytosol	3.45	12.39
Zm00001d031492_P001	Maize	cytosol	2.17	11.89
Zm00001d021624_P002	Maize	mitochondrion	14.56	10.52

Protein Annotations

Gene3D:1.20.80.10	EntrezGene:100382902	Gene3D:2.120.10.80	MapMan:35.1	UniProt:A0A1D6GDQ0	ProteinID:AQK61749.1
InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	ncoils:Coil	InterPro:FERM/acyl-CoA-bd_prot_sf	GO:GO:0000062	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000582	InterPro:IPR014352	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	PFAM:PF00887	PFAM:PF01344	PFAM:PF13415	PFAM:PF13418	PFscan:PS51228
PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SUPFAM:SSF117281	SUPFAM:SSF47027	UniParc:UPI000843A7A2	EnsemblPlantsGene:Zm00001d012892
EnsemblPlants:Zm00001d012892_P002	EnsemblPlants:Zm00001d012892_T002	SEG:seg	:	:	:

Description

Acyl-CoA-binding domain-containing protein 4

Coordinates

chr5:+:1642983..1653530

Molecular Weight (calculated)

85244.0 Da

IEP (calculated)

5.282

GRAVY (calculated)

-0.427

Length

783 amino acids

Sequence
(BLAST)

001: MGGKQLNIPR ASATSAGSVK RRPRRDEASV GSPSPSLESL PPDLGASSPC RLTLQYIGEE EELRFGRVNS TRRLAPVDRR EGEIRAEIQG AAPAMASSGL
101: AYPDRFYAAA AYAGFGVGEA TSSAAISRFQ NDVALLLYGL HQQATVGPCN VPKPRAWNPV EQSKWTSWHG LGSMPSAEAM RLFVKILEEE DPGWYSRAPE
201: FNPEPVVDIQ MHKPKDEPHS VPGSTNGTSI PEPNISENGS SVEAQDKDVI LEGLSTVSSH DQWTPLSVSG LRPKPRYEHG ATVLQNKMYI FGGNHNGRYL
301: SDLQALDLKS LTWSKVDAKL QAEPADSTKT TQIAPCAGHS LISWGNKFLS IAGHTKDPSE GVTVKEFDPH TCTWSIVRTY GKPPVSRGGQ TVTLVGTTLV
401: LFGGEDAERC LLNDLHILDL ETMTWDDVDA IGTPPSPRSD HAAACHADRY LLIFGGGSHA TCFNDLHVLD LQTMEWSRPK QQGPTPSPRA GHAGGTVGEN
501: WYIVGGGNNK SVACDLLCIF MPNITHTLAS TGVSETLVLN MSTLTWSVVS TVEGRVPLAS EGMTLVHSNY GGYDYLISFG GYNGRYNNEV YTLKLSLKSD
601: SQSTLKEETL SDTTSRVIEP EAEIYQDGKI REISVDNADS DLNNRNDEAS EQLLADLKAQ KEELEATLSR EQLQTVQLKE DIARAETRNA ELTKANHLSL
701: TLNFKLSVAN LLLSSQDVSN LRYTLVDVAE LRQKLQSMDA LEKEVELLRR QRAASEQAAM DAKQRQSSGG MWGWLAGSPT PAV

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.