Factsheet for HORVU5Hr1G117970.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G356400.2	Wheat	plastid	93.97	97.76
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	93.82	97.61
TraesCS5D01G515900.2	Wheat	plastid	93.53	97.31
Os03t0835600-01	Rice	plastid	81.03	86.11
EER90565	Sorghum	plastid	80.46	84.98
Zm00001d034758_P003	Maize	plastid	77.59	79.3
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	69.83	72.11
Zm00001d046434_P003	Maize	plastid	61.21	69.95
Zm00001d012892_P002	Maize	plastid	76.87	68.33
GSMUA_Achr6P20340_001	Banana	plastid	65.95	67.3
VIT_14s0060g02410.t01	Wine grape	plastid	64.22	66.32
Solyc01g099350.2.1	Tomato	extracellular	61.93	64.42
AT3G05420.2	Thale cress	cytosol	61.49	63.98
CDY27769	Canola	cytosol	60.78	63.51
CDY05166	Canola	cytosol, nucleus, plastid	60.78	63.51
Bra039439.1-P	Field mustard	cytosol	60.78	63.42
CDY18797	Canola	cytosol	60.49	63.21
CDY18777	Canola	cytosol	60.34	63.16
Bra040219.1-P	Field mustard	cytosol	60.34	63.16
CDY40708	Canola	cytosol	59.91	62.61
KRH68531	Soybean	nucleus	59.05	62.46
KRG96823	Soybean	cytosol, plastid	58.19	62.4
KRG92884	Soybean	nucleus	59.05	62.37
CDX74147	Canola	cytosol, nucleus, plastid	58.91	61.56
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	58.33	60.78
PGSC0003DMT400063503	Potato	extracellular	29.17	60.6
Bra001147.1-P	Field mustard	cytosol	59.2	60.32
CDY05568	Canola	plastid	57.18	59.67
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	56.9	59.37
HORVU5Hr1G025310.1	Barley	cytosol	40.95	59.25
CDY25029	Canola	cytosol, nucleus, plastid	56.75	58.96
HORVU6Hr1G093000.5	Barley	cytosol	31.9	41.57
HORVU4Hr1G032550.32	Barley	mitochondrion	23.99	24.38
HORVU5Hr1G051310.1	Barley	cytosol, mitochondrion, peroxisome	10.92	23.24
HORVU5Hr1G025430.25	Barley	mitochondrion	22.27	22.17
HORVU5Hr1G117920.1	Barley	cytosol	14.08	18.74
HORVU3Hr1G040720.1	Barley	mitochondrion, nucleus, peroxisome, vacuole	15.23	17.12
HORVU2Hr1G083780.14	Barley	nucleus, plastid	14.66	15.29
HORVU2Hr1G046680.19	Barley	cytosol	17.82	11.34

Protein Annotations

Gene3D:1.20.80.10	Gene3D:2.120.10.80	MapMan:35.1	UniProt:A0A287SWF2	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf
ncoils:Coil	InterPro:FERM/acyl-CoA-bd_prot_sf	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:HORVU5Hr1G117970	EnsemblPlants:HORVU5Hr1G117970.2	InterPro:IPR000582	InterPro:IPR014352	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	PFAM:PF00887	PFAM:PF01344	PFAM:PF13415	PFAM:PF13418	PFscan:PS51228
PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SUPFAM:SSF117281	SUPFAM:SSF47027	UniParc:UPI000B47B18B	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:651513461..651520020

Molecular Weight (calculated)

75468.5 Da

IEP (calculated)

4.751

GRAVY (calculated)

-0.361

Length

696 amino acids

Sequence
(BLAST)

001: MASSGIAYPD RFYAAAAYAG FGPGAPSAAA VSRFQNDVAL LLYGLHQQAT VGPCNVPKPR AWSPVEQSKW TSWHGLGSMP SAEAMRLFVK ILEEEDPGWY
101: SRIPEFINPQ PVVDIEMHKP KEEPGIVPAL TNGTGTSSIP EPKTISENGS SMETQDKVVI LEGLSTVSAH EEWTALSVSG QRPKPRYEHG ATVLQDKMFV
201: FGGNHNGRYL SDLQVLDLKS LTWSKIDAKL QAGTSDSAKT AQVSPCAGHS LISCGNKFFS VAGHTKDPSD SITVKEFDPH TCTWSIVRTY GKPPVSRGGQ
301: SVTLVGTTLV VFGGEDAKRC LLNDLHILDL ETMTWDDVDA IGTPPAPRSD HVAACHADRY LLIFGGGSHA TCFNDLHVLD LQTMEWSRPK QQGPIPSPRA
401: GHAGATVGEN WYIVGGGNNK SGVSETLALN MSTLAWSVVS TVEGRVPLAS EGMTLLYSNY SGEDYLISFG GYNGRYNNEV TSILLIIYVP GNCVQNLNVL
501: FSSAGQVYAL KLSVNLDLQS STQDQATSDS TSRVLEPEVE ISQDGKIREI AMDNADSKNR NDEANEQLLA ALKAEKEELE ATLNREGLQT VQLKEEITEA
601: EARNAELTKE LQSVRGQLAA EQSRCFKLEV DVAELRQKLQ SLDALEREVE LLRRQKAASE QEQAALDAKQ KKQAGSGGVW GWLVGTPPDD DDSESS

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.