Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G515900.1 | Wheat | mitochondrion | 95.22 | 99.01 |
| TraesCS4A01G356300.1 | Wheat | mitochondrion | 94.65 | 98.41 |
| TraesCS5D01G516000.1 | Wheat | mitochondrion | 93.31 | 95.31 |
| Os03t0835800-02 | Rice | cytosol | 82.6 | 86.23 |
| KXG37190 | Sorghum | cytosol | 81.64 | 85.06 |
| Zm00001d034759_P001 | Maize | cytosol | 80.88 | 84.6 |
| GSMUA_Achr8P07640_001 | Banana | cytosol | 69.98 | 73.35 |
| PGSC0003DMT400050172 | Potato | cytosol, mitochondrion, plastid | 57.17 | 67.19 |
| CDX75043 | Canola | cytosol | 58.13 | 66.67 |
| Solyc11g007320.1.1 | Tomato | cytosol | 63.67 | 66.47 |
| KRG92046 | Soybean | cytosol | 62.52 | 65.66 |
| Bra040844.1-P | Field mustard | cytosol | 16.44 | 64.66 |
| CDX84132 | Canola | cytosol | 60.8 | 64.24 |
| CDY67946 | Canola | cytosol | 43.02 | 64.1 |
| Bra005274.1-P | Field mustard | cytosol | 45.51 | 63.81 |
| CDX75048 | Canola | cytosol, plastid | 60.42 | 63.45 |
| Bra040845.1-P | Field mustard | cytosol, peroxisome, plastid | 43.59 | 62.47 |
| Bra005279.1-P | Field mustard | cytosol | 37.67 | 60.06 |
| AT2G36360.4 | Thale cress | cytosol | 58.7 | 59.27 |
| VIT_13s0074g00620.t01 | Wine grape | cytosol | 60.04 | 56.47 |
| Bra005272.1-P | Field mustard | cytosol | 49.52 | 44.97 |
| CDX75045 | Canola | cytosol | 58.89 | 36.71 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 13.38 | 21.41 |
| HORVU5Hr1G025310.1 | Barley | cytosol | 17.97 | 19.54 |
| HORVU6Hr1G093000.5 | Barley | cytosol | 17.97 | 17.6 |
| HORVU3Hr1G040720.1 | Barley | mitochondrion, nucleus, peroxisome, vacuole | 19.89 | 16.8 |
| HORVU4Hr1G032550.32 | Barley | mitochondrion | 19.12 | 14.6 |
| HORVU5Hr1G117970.2 | Barley | plastid | 18.74 | 14.08 |
| HORVU5Hr1G025430.25 | Barley | mitochondrion | 18.16 | 13.59 |
| HORVU2Hr1G083780.14 | Barley | nucleus, plastid | 17.21 | 13.49 |
| HORVU2Hr1G046680.19 | Barley | cytosol | 18.16 | 8.69 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G117920.1 | EnsemblPlantsGene:HORVU5Hr1G117920 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF13415 | PFAM:PF13418 | SEG:seg |
| SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI000B484BBB | UniProt:A0A287SWD9 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr5H:-:651493960..651511206
Molecular Weight (calculated)
57339.0 Da
IEP (calculated)
5.646
GRAVY (calculated)
-0.327
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: LPRSGDATAA DRVTGSGGGM MQQLQPTRMH WARAVPSDFG GQAPAPRSSG HTAVAIGGSK VVVFGGFADK RFLADIAVYD VENRLWYTPE CSGSGPDGQP
101: GPSPRAFHVA VVIDCNMFIF GGRSGGKRLG DFWMLDTDIW QWSEMTGFGD LPSPREFAAA SAIGNRKIVM HGGWDGKKWL SDVYVMDTMS LEWTELAVTG
201: SAPPPRCGHS ATMIEKRLLI FGGRGGTGPI MGDLWALKGI TEEDNETPGW TQLKLPGQSP SARCGHSVTS GGPYLLLFGG HGTGGWLSRY DVYYNECVIL
301: DRVSVQWKRL PTSNEPPPPR AYHSMTCIGP RFLLFGGFDG KNTFGDLWWL VPEDDPIAKR DLVPNVGSDS NHSTVTGDAQ QSALKESESQ SDESPMLDLA
401: KRLGIPLSVE PSASFVDEIN DKELVELSSR LIGESLPTTD QLACIQALRD HWRSSPSSSI QLQELGPLLR DYQRLIIRRF VENPSPTFLE REDRRLFHLK
501: NASQLRMDDI PILLGEYRTL LST
101: GPSPRAFHVA VVIDCNMFIF GGRSGGKRLG DFWMLDTDIW QWSEMTGFGD LPSPREFAAA SAIGNRKIVM HGGWDGKKWL SDVYVMDTMS LEWTELAVTG
201: SAPPPRCGHS ATMIEKRLLI FGGRGGTGPI MGDLWALKGI TEEDNETPGW TQLKLPGQSP SARCGHSVTS GGPYLLLFGG HGTGGWLSRY DVYYNECVIL
301: DRVSVQWKRL PTSNEPPPPR AYHSMTCIGP RFLLFGGFDG KNTFGDLWWL VPEDDPIAKR DLVPNVGSDS NHSTVTGDAQ QSALKESESQ SDESPMLDLA
401: KRLGIPLSVE PSASFVDEIN DKELVELSSR LIGESLPTTD QLACIQALRD HWRSSPSSSI QLQELGPLLR DYQRLIIRRF VENPSPTFLE REDRRLFHLK
501: NASQLRMDDI PILLGEYRTL LST
001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI
Arabidopsis Description
Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.