Factsheet for Bra005272.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005274.1-P	Field mustard	cytosol	63.19	97.59
Bra005279.1-P	Field mustard	cytosol	53.47	93.9
Bra040844.1-P	Field mustard	cytosol	20.66	89.47
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	54.69	86.3
CDX75043	Canola	cytosol	67.19	84.87
AT2G36360.4	Thale cress	cytosol	65.97	73.36
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	44.97	58.2
Solyc11g007320.1.1	Tomato	cytosol	49.13	56.49
KRG92046	Soybean	cytosol	48.78	56.43
GSMUA_Achr8P07640_001	Banana	cytosol	47.22	54.51
Zm00001d034759_P001	Maize	cytosol	45.66	52.6
Os03t0835800-02	Rice	cytosol	45.49	52.3
KXG37190	Sorghum	cytosol	45.31	51.99
TraesCS5B01G515900.1	Wheat	mitochondrion	44.79	51.29
TraesCS4A01G356300.1	Wheat	mitochondrion	44.62	51.09
VIT_13s0074g00620.t01	Wine grape	cytosol	48.09	49.82
HORVU5Hr1G117920.1	Barley	cytosol	44.97	49.52
TraesCS5D01G516000.1	Wheat	mitochondrion	43.58	49.02
Bra037506.1-P	Field mustard	cytosol	9.03	16.15
Bra008135.1-P	Field mustard	mitochondrion, nucleus	13.02	15.34
Bra039702.1-P	Field mustard	cytosol	6.94	15.21
Bra025672.1-P	Field mustard	nucleus	12.85	14.31
Bra016550.1-P	Field mustard	mitochondrion	12.85	14.12
Bra037958.1-P	Field mustard	cytosol	6.25	13.69
Bra005805.1-P	Field mustard	cytosol	11.46	13.12
Bra022157.1-P	Field mustard	cytosol	2.6	11.9
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	13.54	11.69
Bra040219.1-P	Field mustard	cytosol	13.37	11.58
Bra029671.1-P	Field mustard	cytosol	2.43	11.57
Bra001147.1-P	Field mustard	cytosol	13.54	11.42
Bra039439.1-P	Field mustard	cytosol	13.19	11.39
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	13.02	11.24
Bra040923.1-P	Field mustard	cytosol	9.55	10.81
Bra002170.1-P	Field mustard	mitochondrion	12.33	10.14
Bra020713.1-P	Field mustard	cytosol	2.08	10.08
Bra018943.1-P	Field mustard	cytosol	3.47	9.95
Bra000617.1-P	Field mustard	endoplasmic reticulum	13.54	8.18
Bra000803.1-P	Field mustard	cytosol	13.54	7.9
Bra018944.1-P	Field mustard	cytosol	9.38	6.82
Bra022159.1-P	Field mustard	cytosol	2.95	6.44
Bra021175.1-P	Field mustard	cytosol	2.26	5.02

Protein Annotations

EnsemblPlants:Bra005272.1	EnsemblPlants:Bra005272.1-P	EnsemblPlantsGene:Bra005272	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401
PFAM:PF13415	PFAM:PF13418	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0002547C5D
UniProt:M4CM35	MapMan:35.1	:	:	:	:

Description

AT2G36360 (E=5e-120) | kelch repeat-containing protein

Coordinates

chrA05:+:4470465..4474615

Molecular Weight (calculated)

64003.6 Da

IEP (calculated)

5.941

GRAVY (calculated)

-0.264

Length

576 amino acids

Sequence
(BLAST)

001: MHNWVRASSS DLTGTPPQPR SGHTAVNVGK SMVVVFGGLV DKKFLNDIIV YDIENKLWFE PECTGSVSEG KVGPTPRAFH VAITNDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFS AAAAIGNQKI VLCGGWDGKK WLSDVYVMDT MSLEWMELSV SGSLPPPRCG HTATMVEKRL LVFGGRGICT
201: GSVSEGKVGP TPRAFHVAIT IDCHMFIFGG RSGGKRLGDF WVLDTDIWQW SELTSFGDLP TPRDFSAAAA IGNQKIVLCG GWDGKKWLSD VYVMDTMSLE
301: WMELSVSGSL PPPRCGHTAT MVEKRLLVFG GRGGGGPIMG DLWALKGLID EVTAQWKRLP ISNDEPPPPR AYHTMTSIVA RHLLIGGFDG KSTFGDLWWL
401: VPEDDPIAKR SSVPQLRNPP ETKESERDLD TQERGQEGFT IVDLQKKMGI SVASGLLRRH IPEESEDQEF VELGTRLIEG DVIDNRASMM QMAAEALRQH
501: WKESTPETLQ LKELNALLRD YQRLVTRKYT AQSSLTSTDF GLPGKQTFTF YHIKTSSELR MDDIPKLLEE YKTLVI

Best Arabidopsis Sequence Match ( AT2G36360.1 )
(BLAST)

001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.