Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040845.1-P | Field mustard | cytosol, peroxisome, plastid | 73.9 | 92.33 |
| CDX84132 | Canola | cytosol | 97.59 | 89.9 |
| Bra040844.1-P | Field mustard | cytosol | 25.88 | 88.72 |
| CDX75048 | Canola | cytosol, plastid | 96.27 | 88.15 |
| CDY67946 | Canola | cytosol | 65.57 | 85.19 |
| AT2G36360.4 | Thale cress | cytosol | 89.25 | 78.57 |
| Bra005272.1-P | Field mustard | cytosol | 84.87 | 67.19 |
| PGSC0003DMT400050172 | Potato | cytosol, mitochondrion, plastid | 64.04 | 65.62 |
| Solyc11g007320.1.1 | Tomato | cytosol | 71.27 | 64.87 |
| KRG92046 | Soybean | cytosol | 70.83 | 64.86 |
| GSMUA_Achr8P07640_001 | Banana | cytosol | 68.86 | 62.93 |
| Os03t0835800-02 | Rice | cytosol | 67.76 | 61.68 |
| Zm00001d034759_P001 | Maize | cytosol | 67.11 | 61.2 |
| KXG37190 | Sorghum | cytosol | 67.11 | 60.96 |
| TraesCS5B01G515900.1 | Wheat | mitochondrion | 66.45 | 60.24 |
| TraesCS4A01G356300.1 | Wheat | mitochondrion | 66.23 | 60.04 |
| HORVU5Hr1G117920.1 | Barley | cytosol | 66.67 | 58.13 |
| TraesCS5D01G516000.1 | Wheat | mitochondrion | 65.13 | 58.01 |
| VIT_13s0074g00620.t01 | Wine grape | cytosol | 69.74 | 57.19 |
| CDX75045 | Canola | cytosol | 99.56 | 54.11 |
| CDY35957 | Canola | cytosol | 16.01 | 22.32 |
| CDY28023 | Canola | cytosol | 16.01 | 22.32 |
| CDY43093 | Canola | cytosol | 3.95 | 22.22 |
| CDY48738 | Canola | cytosol | 15.13 | 21.43 |
| CDY30169 | Canola | cytosol | 14.91 | 21.05 |
| CDY05697 | Canola | cytosol | 14.69 | 20.81 |
| CDY36630 | Canola | cytosol | 15.35 | 20.41 |
| CDY08215 | Canola | cytosol | 15.57 | 20.4 |
| CDY51408 | Canola | cytosol | 15.13 | 20.12 |
| CDY30681 | Canola | cytosol | 15.35 | 20.11 |
| CDX85317 | Canola | cytosol | 14.04 | 19.88 |
| CDX96969 | Canola | peroxisome | 14.69 | 19.53 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 14.47 | 18.8 |
| CDY52048 | Canola | plastid | 14.47 | 18.8 |
| CDY42440 | Canola | mitochondrion | 19.96 | 18.8 |
| CDX86322 | Canola | cytosol | 14.04 | 18.6 |
| CDY64894 | Canola | cytosol, mitochondrion | 10.53 | 18.6 |
| CDY49133 | Canola | mitochondrion, nucleus | 19.08 | 17.76 |
| CDX94790 | Canola | cytosol | 13.16 | 17.49 |
| CDY26745 | Canola | nucleus | 19.74 | 17.41 |
| CDY19228 | Canola | nucleus | 19.74 | 17.41 |
| CDY49014 | Canola | cytosol | 12.94 | 17.2 |
| CDX96712 | Canola | mitochondrion | 19.74 | 17.18 |
| CDX83831 | Canola | nucleus | 19.96 | 17.04 |
| CDY24063 | Canola | cytosol, mitochondrion | 10.53 | 16.9 |
| CDY56199 | Canola | cytosol | 15.13 | 16.71 |
| CDY03963 | Canola | cytosol | 16.23 | 15.85 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 14.47 | 15.6 |
| CDX92073 | Canola | cytosol | 16.01 | 15.47 |
| CDX73059 | Canola | cytosol, mitochondrion | 19.74 | 15.46 |
| CDY28366 | Canola | cytosol | 15.57 | 15.2 |
| CDY03958 | Canola | cytosol | 15.35 | 15.02 |
| CDY20194 | Canola | cytosol | 15.35 | 14.99 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 15.13 | 14.9 |
| CDX96521 | Canola | mitochondrion | 19.96 | 14.77 |
| CDY58438 | Canola | cytosol | 16.23 | 14.71 |
| CDY11290 | Canola | cytosol | 16.23 | 14.71 |
| CDY18797 | Canola | cytosol | 19.3 | 13.21 |
| CDY05568 | Canola | plastid | 19.3 | 13.19 |
| CDY34042 | Canola | nucleus | 19.08 | 13.12 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 19.08 | 13.06 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 19.08 | 12.99 |
| CDY18777 | Canola | cytosol | 18.86 | 12.93 |
| CDY40708 | Canola | cytosol | 18.64 | 12.76 |
| CDY27769 | Canola | cytosol | 18.42 | 12.61 |
| CDY13903 | Canola | mitochondrion | 18.42 | 12.46 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 18.2 | 12.46 |
| CDX92598 | Canola | mitochondrion | 18.42 | 12.0 |
| CDX83165 | Canola | nucleus | 19.08 | 8.77 |
| CDY21313 | Canola | cytosol | 18.64 | 8.57 |
| CDX90875 | Canola | cytosol | 18.64 | 8.42 |
| CDY60589 | Canola | cytosol | 14.25 | 8.21 |
| CDY65828 | Canola | cytosol | 1.32 | 1.85 |
| CDY43091 | Canola | cytosol | 0.44 | 1.77 |
| CDY72137 | Canola | cytosol | 0.44 | 1.3 |
Protein Annotations
| EnsemblPlants:CDX75043 | EnsemblPlantsGene:GSBRNA2T00117072001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF13415 | PFAM:PF13418 | ProteinID:CDX75043 |
| ProteinID:CDX75043.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0004EDD2F5 | MapMan:35.1 |
Description
BnaA05g07890D
Coordinates
chrLK031802:+:2168731..2172111
Molecular Weight (calculated)
50830.6 Da
IEP (calculated)
6.516
GRAVY (calculated)
-0.351
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MHNWVRASSS DFTGTPPQPR SGHTAVNVGK SMVVVFGGLV DKKFLNDIIV YDIENKLWFE PECTGSVSEG KVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFS AAAAIGNQKI VLCGGWDGKK WLSDVYVMDT MSLEWMELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSARCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPISNDEPP PPRAYHTMTS
301: IVARHLLIGG FDGKSTFGDL WWLVPEDDPI AKRSSVPQLR NPPETKESER DLDTQERGQE GFTIADLQKK MGISMAAEAL RQHWKESTPE TLQLKELGSL
401: LRDYQRLVTR KYTAQSSLTS ADFGKKTFTF YHIKNSSELR MDDIAELLEE YKTLVI
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFS AAAAIGNQKI VLCGGWDGKK WLSDVYVMDT MSLEWMELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSARCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPISNDEPP PPRAYHTMTS
301: IVARHLLIGG FDGKSTFGDL WWLVPEDDPI AKRSSVPQLR NPPETKESER DLDTQERGQE GFTIADLQKK MGISMAAEAL RQHWKESTPE TLQLKELGSL
401: LRDYQRLVTR KYTAQSSLTS ADFGKKTFTF YHIKNSSELR MDDIAELLEE YKTLVI
001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI
Arabidopsis Description
Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.