Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51408 | Canola | cytosol | 55.28 | 45.77 |
| CDX94790 | Canola | cytosol | 54.93 | 45.48 |
| Bra039702.1-P | Field mustard | cytosol | 41.9 | 45.25 |
| CDY49014 | Canola | cytosol | 53.87 | 44.61 |
| CDX96969 | Canola | peroxisome | 53.52 | 44.31 |
| CDY36630 | Canola | cytosol | 52.46 | 43.44 |
| AT1G54040.2 | Thale cress | cytosol | 51.41 | 42.82 |
| CDY08215 | Canola | cytosol | 52.11 | 42.53 |
| CDY30681 | Canola | cytosol | 48.94 | 39.94 |
| CDY64894 | Canola | cytosol, mitochondrion | 33.45 | 36.82 |
| CDY52048 | Canola | plastid | 40.49 | 32.76 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 40.49 | 32.76 |
| CDY30169 | Canola | cytosol | 35.92 | 31.58 |
| CDX85317 | Canola | cytosol | 33.8 | 29.81 |
| CDY05697 | Canola | cytosol | 33.8 | 29.81 |
| CDY48738 | Canola | cytosol | 33.45 | 29.5 |
| CDY28023 | Canola | cytosol | 33.8 | 29.36 |
| CDY35957 | Canola | cytosol | 33.45 | 29.05 |
| CDX86322 | Canola | cytosol | 33.8 | 27.91 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 31.69 | 27.61 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 43.66 | 26.78 |
| CDY03958 | Canola | cytosol | 43.66 | 26.61 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 30.63 | 26.61 |
| CDY20194 | Canola | cytosol | 43.66 | 26.55 |
| CDY56199 | Canola | cytosol | 38.03 | 26.15 |
| CDY03963 | Canola | cytosol | 42.96 | 26.12 |
| CDY28366 | Canola | cytosol | 42.96 | 26.12 |
| CDX92073 | Canola | cytosol | 42.96 | 25.85 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 29.93 | 25.6 |
| KXG34722 | Sorghum | cytosol | 30.28 | 25.52 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 28.87 | 25.08 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 28.87 | 25.08 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 37.32 | 25.06 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 28.52 | 24.77 |
| KRH43755 | Soybean | cytosol | 28.52 | 24.7 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 28.17 | 24.46 |
| Zm00001d019221_P001 | Maize | cytosol | 30.63 | 22.77 |
| CDY60589 | Canola | cytosol | 41.9 | 15.03 |
| CDY43091 | Canola | cytosol | 4.58 | 11.5 |
| CDY19228 | Canola | nucleus | 20.07 | 11.03 |
| CDY42440 | Canola | mitochondrion | 18.31 | 10.74 |
| CDY26745 | Canola | nucleus | 19.37 | 10.64 |
| CDY49133 | Canola | mitochondrion, nucleus | 18.31 | 10.61 |
| CDX75043 | Canola | cytosol | 16.9 | 10.53 |
| CDX96712 | Canola | mitochondrion | 18.66 | 10.11 |
| CDY58438 | Canola | cytosol | 17.61 | 9.94 |
| CDY11290 | Canola | cytosol | 17.25 | 9.74 |
| CDX84132 | Canola | cytosol | 16.9 | 9.7 |
| CDX75048 | Canola | cytosol, plastid | 16.9 | 9.64 |
| CDX83831 | Canola | nucleus | 17.96 | 9.55 |
| CDY67946 | Canola | cytosol | 11.62 | 9.4 |
| CDY72137 | Canola | cytosol | 4.93 | 9.09 |
| CDX73059 | Canola | cytosol, mitochondrion | 17.96 | 8.76 |
| CDX96521 | Canola | mitochondrion | 18.31 | 8.44 |
| CDY18777 | Canola | cytosol | 19.37 | 8.27 |
| CDY18797 | Canola | cytosol | 19.37 | 8.26 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 19.01 | 8.11 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 19.01 | 8.11 |
| CDY27769 | Canola | cytosol | 19.01 | 8.11 |
| CDY05568 | Canola | plastid | 18.31 | 7.8 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 18.31 | 7.76 |
| CDY40708 | Canola | cytosol | 17.61 | 7.51 |
| CDY43093 | Canola | cytosol | 2.11 | 7.41 |
| CDY34042 | Canola | nucleus | 17.25 | 7.39 |
| CDY13903 | Canola | mitochondrion | 15.85 | 6.68 |
| CDX92598 | Canola | mitochondrion | 15.85 | 6.43 |
| PGSC0003DMT400046550 | Potato | cytosol | 2.46 | 6.19 |
| CDX75045 | Canola | cytosol | 16.9 | 5.72 |
| CDX83165 | Canola | nucleus | 17.25 | 4.94 |
| CDY21313 | Canola | cytosol | 14.08 | 4.03 |
| CDX90875 | Canola | cytosol | 14.08 | 3.96 |
| CDY65828 | Canola | cytosol | 3.17 | 2.77 |
Protein Annotations
| EnsemblPlants:CDY24063 | EnsemblPlantsGene:GSBRNA2T00024596001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF351 | PFAM:PF01344 |
| PFAM:PF13964 | ProteinID:CDY24063 | ProteinID:CDY24063.1 | SEG:seg | SUPFAM:SSF117281 | UniParc:UPI0004EDD0C4 |
| UniProt:A0A078GHH4 | MapMan:35.1 | : | : | : | : |
Description
BnaA06g00610DBnaA06g00610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHH4]
Coordinates
chrLK032153:+:219274..224330
Molecular Weight (calculated)
32001.3 Da
IEP (calculated)
8.657
GRAVY (calculated)
-0.433
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNFVTYKNL LFNLLLNTQT STKAKDFTKK QKNKKTCAFY CEKKMNTDAV APTLQGEWIK VEQKGGNAPG KRCSHGIAVV GDKLYSFGGE LETNVAIDKD
101: LYVFDLNTQN WSIAPANGDV VPTISSFGVR MVAVGTKLYV FGGRNEDKVS SDFYSYDTVT NEWKFLTKLG EEGGPETRTY HSMAADENHV YVFGGVNQGG
201: EMVTPFRFRT VESYNIDDGK WAQLPDPGEQ FPMFEKKEEL DSMWCKGRFG WFTGLQLRLI LMGIMTTSLI KCNFTIRPLK NGPK
101: LYVFDLNTQN WSIAPANGDV VPTISSFGVR MVAVGTKLYV FGGRNEDKVS SDFYSYDTVT NEWKFLTKLG EEGGPETRTY HSMAADENHV YVFGGVNQGG
201: EMVTPFRFRT VESYNIDDGK WAQLPDPGEQ FPMFEKKEEL DSMWCKGRFG WFTGLQLRLI LMGIMTTSLI KCNFTIRPLK NGPK
001: MAPTLQGQWI KVGQKGGTGP GPRSSHGIAA VGDKLYSFGG ELTPNKHIDK DLYVFDFNTQ TWSIAQPKGD APTVSCLGVR MVAVGTKIYI FGGRDENRNF
101: ENFRSYDTVT SEWTFLTKLD EVGGPEARTF HSMASDENHV YVFGGVSKGG TMNTPTRFRT IEAYNIADGK WAQLPDPGDN FEKRGGAGFA VVQGKIWVVY
201: GFATSIVPGG KDDYESNAVQ FYDPASKKWT EVETTGAKPS ARSVFAHAVV GKYIIIFAGE VWPDLNGHYG PGTLSNEGYA LDTETLVWEK LGEEGAPAIP
301: RGWTAYTAAT VDGKNGLLMH GGKLPTNERT DDLYFYAVNS A
101: ENFRSYDTVT SEWTFLTKLD EVGGPEARTF HSMASDENHV YVFGGVSKGG TMNTPTRFRT IEAYNIADGK WAQLPDPGDN FEKRGGAGFA VVQGKIWVVY
201: GFATSIVPGG KDDYESNAVQ FYDPASKKWT EVETTGAKPS ARSVFAHAVV GKYIIIFAGE VWPDLNGHYG PGTLSNEGYA LDTETLVWEK LGEEGAPAIP
301: RGWTAYTAAT VDGKNGLLMH GGKLPTNERT DDLYFYAVNS A
Arabidopsis Description
ESPEpithiospecifier protein [Source:UniProtKB/Swiss-Prot;Acc:Q8RY71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.