Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75043 | Canola | cytosol | 89.9 | 97.59 |
| CDX75048 | Canola | cytosol, plastid | 96.57 | 95.98 |
| Bra005274.1-P | Field mustard | cytosol | 71.92 | 95.44 |
| CDY67946 | Canola | cytosol | 61.01 | 86.04 |
| AT2G36360.4 | Thale cress | cytosol | 88.89 | 84.94 |
| PGSC0003DMT400050172 | Potato | cytosol, mitochondrion, plastid | 61.21 | 68.09 |
| KRG92046 | Soybean | cytosol | 68.08 | 67.67 |
| Solyc11g007320.1.1 | Tomato | cytosol | 68.28 | 67.47 |
| GSMUA_Achr8P07640_001 | Banana | cytosol | 66.46 | 65.93 |
| Os03t0835800-02 | Rice | cytosol | 64.85 | 64.07 |
| Zm00001d034759_P001 | Maize | cytosol | 64.44 | 63.8 |
| KXG37190 | Sorghum | cytosol | 64.44 | 63.55 |
| TraesCS5B01G515900.1 | Wheat | mitochondrion | 64.04 | 63.02 |
| TraesCS4A01G356300.1 | Wheat | mitochondrion | 63.84 | 62.82 |
| HORVU5Hr1G117920.1 | Barley | cytosol | 64.24 | 60.8 |
| TraesCS5D01G516000.1 | Wheat | mitochondrion | 62.42 | 60.35 |
| VIT_13s0074g00620.t01 | Wine grape | cytosol | 67.47 | 60.07 |
| CDX75045 | Canola | cytosol | 94.75 | 55.9 |
| CDY43093 | Canola | cytosol | 3.84 | 23.46 |
| CDY35957 | Canola | cytosol | 15.15 | 22.94 |
| CDY28023 | Canola | cytosol | 15.15 | 22.94 |
| CDY48738 | Canola | cytosol | 14.34 | 22.05 |
| CDY05697 | Canola | cytosol | 13.94 | 21.43 |
| CDY30169 | Canola | cytosol | 13.94 | 21.36 |
| CDY36630 | Canola | cytosol | 14.34 | 20.7 |
| CDY08215 | Canola | cytosol | 14.55 | 20.69 |
| CDX85317 | Canola | cytosol | 13.33 | 20.5 |
| CDY51408 | Canola | cytosol | 14.14 | 20.41 |
| CDY30681 | Canola | cytosol | 14.34 | 20.4 |
| CDY42440 | Canola | mitochondrion | 19.39 | 19.83 |
| CDX96969 | Canola | peroxisome | 13.74 | 19.83 |
| CDX86322 | Canola | cytosol | 13.33 | 19.19 |
| CDY52048 | Canola | plastid | 13.54 | 19.09 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 13.54 | 19.09 |
| CDY64894 | Canola | cytosol, mitochondrion | 9.9 | 18.99 |
| CDY49133 | Canola | mitochondrion, nucleus | 18.59 | 18.78 |
| CDY26745 | Canola | nucleus | 18.79 | 17.99 |
| CDY19228 | Canola | nucleus | 18.59 | 17.8 |
| CDX94790 | Canola | cytosol | 12.32 | 17.78 |
| CDX96712 | Canola | mitochondrion | 18.59 | 17.56 |
| CDY49014 | Canola | cytosol | 12.12 | 17.49 |
| CDX83831 | Canola | nucleus | 18.79 | 17.42 |
| CDY56199 | Canola | cytosol | 14.14 | 16.95 |
| CDY24063 | Canola | cytosol, mitochondrion | 9.7 | 16.9 |
| CDY03963 | Canola | cytosol | 15.15 | 16.06 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 13.54 | 15.84 |
| CDX73059 | Canola | cytosol, mitochondrion | 18.59 | 15.81 |
| CDX92073 | Canola | cytosol | 14.95 | 15.68 |
| CDY28366 | Canola | cytosol | 14.55 | 15.42 |
| CDY58438 | Canola | cytosol | 15.56 | 15.31 |
| CDY11290 | Canola | cytosol | 15.56 | 15.31 |
| CDX96521 | Canola | mitochondrion | 18.99 | 15.26 |
| CDY03958 | Canola | cytosol | 14.34 | 15.24 |
| CDY20194 | Canola | cytosol | 14.34 | 15.2 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 14.14 | 15.12 |
| CDY34042 | Canola | nucleus | 18.59 | 13.88 |
| CDY05568 | Canola | plastid | 18.59 | 13.79 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 18.38 | 13.66 |
| CDY18797 | Canola | cytosol | 18.38 | 13.66 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 18.38 | 13.58 |
| CDY18777 | Canola | cytosol | 17.98 | 13.38 |
| CDY40708 | Canola | cytosol | 17.98 | 13.36 |
| CDY27769 | Canola | cytosol | 17.58 | 13.06 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 17.37 | 12.91 |
| CDY13903 | Canola | mitochondrion | 17.37 | 12.76 |
| CDX92598 | Canola | mitochondrion | 17.37 | 12.29 |
| CDX83165 | Canola | nucleus | 18.59 | 9.27 |
| CDY21313 | Canola | cytosol | 18.18 | 9.07 |
| CDX90875 | Canola | cytosol | 18.18 | 8.92 |
| CDY60589 | Canola | cytosol | 13.33 | 8.33 |
| CDY65828 | Canola | cytosol | 1.21 | 1.85 |
| CDY43091 | Canola | cytosol | 0.4 | 1.77 |
| CDY72137 | Canola | cytosol | 0.4 | 1.3 |
Protein Annotations
| EnsemblPlants:CDX84132 | EnsemblPlantsGene:GSBRNA2T00141141001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF401 | PFAM:PF13415 |
| PFAM:PF13418 | ProteinID:CDX84132 | ProteinID:CDX84132.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 |
| UniParc:UPI0004EDB228 | MapMan:35.1 | : | : | : | : |
Description
BnaC04g08940D
Coordinates
chrLK031836:+:69933..73941
Molecular Weight (calculated)
55111.7 Da
IEP (calculated)
5.805
GRAVY (calculated)
-0.354
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MHNWVRASSS DFTGTPPQPR SGHTAVNVGK SMVVVFGGLV DKKFLNDIIV YDIENKLWFE PECTGSVSDG KVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFS AAAAIGNQKI VLCGGWDGKK WLSDVYVMDT MSLEWMELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSARCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPISNDEPP PPRAYHTMTS
301: IGARHLLIGG FDGKSTFGDL WWLVPEDDPI AKRSSVPQLR SPPETKESER ELDTQERGQE GSTIADLQKK MGISVSSGLR LQIPEESEDE EFVELGTRLI
401: EGDVIDNRAS MIQMAAEALR QHWKESTPET LQLKELGSLL RDYQRLVTRK YIAQSTLTSA DFGKKTFTFY HIKTSSELRM DDIPKLLEEY KTLLI
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFS AAAAIGNQKI VLCGGWDGKK WLSDVYVMDT MSLEWMELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSARCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPISNDEPP PPRAYHTMTS
301: IGARHLLIGG FDGKSTFGDL WWLVPEDDPI AKRSSVPQLR SPPETKESER ELDTQERGQE GSTIADLQKK MGISVSSGLR LQIPEESEDE EFVELGTRLI
401: EGDVIDNRAS MIQMAAEALR QHWKESTPET LQLKELGSLL RDYQRLVTRK YIAQSTLTSA DFGKKTFTFY HIKTSSELRM DDIPKLLEEY KTLLI
001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI
Arabidopsis Description
Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.