CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72137	Canola	cytosol	14.46	30.52
CDY43091	Canola	cytosol	9.54	27.43
CDY60589	Canola	cytosol	32.31	13.26
CDY28366	Canola	cytosol	16.92	11.78
CDX92073	Canola	cytosol	16.92	11.65
CDY20194	Canola	cytosol	16.62	11.56
CDY03963	Canola	cytosol	16.62	11.56
CDY03958	Canola	cytosol	16.0	11.16
CDY56199	Canola	cytosol	12.31	9.69
CDY56200	Canola	endoplasmic reticulum, extracellular, plasma membrane	12.62	8.86
CDY65743	Canola	cytosol, peroxisome, plastid	10.77	8.27
CDY30169	Canola	cytosol	3.69	3.72
CDY19142	Canola	cytosol, peroxisome, plastid	4.0	3.7
CDY52048	Canola	plastid	4.0	3.7
CDY18777	Canola	cytosol	6.77	3.31
CDY40708	Canola	cytosol	6.77	3.3
CDY27769	Canola	cytosol	6.77	3.3
CDY05166	Canola	cytosol, nucleus, plastid	6.77	3.3
CDY24063	Canola	cytosol, mitochondrion	2.77	3.17
CDX74147	Canola	cytosol, nucleus, plastid	6.46	3.15
CDY18797	Canola	cytosol	6.46	3.15
CDY35957	Canola	cytosol	2.77	2.75
CDY05568	Canola	plastid	5.54	2.7
CDY25029	Canola	cytosol, nucleus, plastid	5.54	2.69
CDY28023	Canola	cytosol	2.46	2.45
CDY36630	Canola	cytosol	2.46	2.33
CDY51408	Canola	cytosol	2.46	2.33
CDY64894	Canola	cytosol, mitochondrion	1.85	2.33
CDY48738	Canola	cytosol	2.15	2.17
CDX85317	Canola	cytosol	2.15	2.17
CDY05697	Canola	cytosol	2.15	2.17
CDX96969	Canola	peroxisome	2.15	2.04
CDX94790	Canola	cytosol	2.15	2.04
CDY49014	Canola	cytosol	2.15	2.04
CDX86322	Canola	cytosol	2.15	2.03
CDY08215	Canola	cytosol	2.15	2.01
CDY13903	Canola	mitochondrion	3.69	1.78
CDY30681	Canola	cytosol	1.85	1.72
CDX92598	Canola	mitochondrion	3.69	1.71
CDY34042	Canola	nucleus	3.38	1.66
CDX90875	Canola	cytosol	4.31	1.39
CDY19228	Canola	nucleus	2.15	1.35
CDY26745	Canola	nucleus	2.15	1.35
CDX75043	Canola	cytosol	1.85	1.32
CDY21313	Canola	cytosol	4.0	1.31
CDY42440	Canola	mitochondrion	1.85	1.24
CDY43093	Canola	cytosol	0.31	1.23
CDY49133	Canola	mitochondrion, nucleus	1.85	1.22
CDX84132	Canola	cytosol	1.85	1.21
CDX83165	Canola	nucleus	3.69	1.21
CDX75048	Canola	cytosol, plastid	1.85	1.2
CDY67946	Canola	cytosol	1.23	1.14
CDX83831	Canola	nucleus	1.85	1.12
CDY58438	Canola	cytosol	1.54	0.99
CDY11290	Canola	cytosol	1.54	0.99
CDX96712	Canola	mitochondrion	1.54	0.95
CDX73059	Canola	cytosol, mitochondrion	1.54	0.86
CDX96521	Canola	mitochondrion	1.54	0.81
CDX75045	Canola	cytosol	1.85	0.72

Protein Annotations

EnsemblPlants:CDY65828	EnsemblPlantsGene:GSBRNA2T00048311001	Gene3D:2.100.10.30	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom
InterPro:Jacalin-like_lectin_dom_sf	PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	PFAM:PF01419	PFscan:PS51752	ProteinID:CDY65828
ProteinID:CDY65828.1	SMART:SM00915	SUPFAM:SSF51101	UniParc:UPI0004EEBB2F	UniProt:A0A078JE22	MapMan:35.1

Description

BnaC01g43980DBnaC01g43980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JE22]

Coordinates

chrLK034968:+:697..2345

Molecular Weight (calculated)

36536.3 Da

IEP (calculated)

5.556

GRAVY (calculated)

-0.266

Length

325 amino acids

Sequence
(BLAST)

001: MEHLLKSRGN RFNDGVFRGL SGVYVGDDGV NVTFLKLVYE HTSGETIEVM HGVEIGNVEE FEFSYPEEYV TSLEWTCGVH LTLRRLIFRT SNGRTSRAFG
101: NDQGVFPEIP VLVESNRDEA PAVVGFRGRY DHHGIIELKA YFGPPPPKKL REIGGLGGEE WDDGKHEHVK TIHIGRGASG LTMLQVDYKD GTTLVQGDRH
201: GMVTLSEDTF EIPYETDHLV TVEVYRNKVG REDECISALR FKTRNGLVSE MYGVASGEMH SLTGHKVVGF FGAQMSDNNI DLSSEICSNS YIIYSPWFLS
301: FLSLRCMCYA IQGCVLAFKE YYVRT

Best Arabidopsis Sequence Match ( AT1G57570.1 )
(BLAST)

001: MERNLLSILM RRRLAERNRD AIELAAVQKM EVIGSTEGYT FDDGSDHDDV TKIFVGGGRQ GIHYIEFEYV KNGQLESGVH LGVRYRGFTE TFEINHLNNE
101: HLESVEGYYD YGSGYIQGLQ FKTNFRVSEL IGYDEGTKFS LSVKGKRIIG FHGYMKERKI ISLGGYFSWI HPRKMEAKGS KGGNQWDDGT NNDGVTKIHV
201: RGGVEGIQYI KFDYVRKSGQ HINGSIHGLS GSGFTQTFEI DHLNNEHLVC VEGYYDDESG VIQALQFKTN IKTSELLGYK KGKKFSLVDK RKKIVGFHGY
301: ADKNLNSLGA YFTTVSPTKS ECYGSSKGIY WDDGVFDFIR TVYVSSNVMN VRYIKFHYYN RAVVVRQHGW NSIVEEDGEK EFELDYPNEL ITSVEGTMKS
401: FSRSEIRISS LTFKTSKGRT SPTIGIASGT KFLLASKGCA VVGFYGRHDD RDLVAIGAYF SPLPPPTAEK LQAQGGNQGD SWDDGVFEGV RKLYVGQGKN
501: CVAFLKVVYD SNTQVVIGED HGNKTLFEVK EYELEYPSEY ITAVDGCYNK VNGTEVEVIT MLRIQTNKRT SIPVGCESNS SFVLKKEGYK IVGFHGKASN
601: MINQLGVHVV PLTE

Arabidopsis Description

JAL14Jacalin-related lectin 14 [Source:UniProtKB/Swiss-Prot;Acc:F4I837]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.