Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018943.1-P | Field mustard | cytosol | 46.81 | 98.51 |
| CDY30169 | Canola | cytosol | 46.34 | 60.68 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 47.75 | 57.55 |
| CDY52048 | Canola | plastid | 47.28 | 56.98 |
| CDY08215 | Canola | cytosol | 43.26 | 52.59 |
| CDX96969 | Canola | peroxisome | 42.55 | 52.48 |
| CDY49014 | Canola | cytosol | 42.32 | 52.19 |
| CDY51408 | Canola | cytosol | 42.32 | 52.19 |
| CDY36630 | Canola | cytosol | 42.08 | 51.9 |
| CDX94790 | Canola | cytosol | 42.08 | 51.9 |
| CDX85317 | Canola | cytosol | 39.24 | 51.55 |
| CDY30681 | Canola | cytosol | 41.61 | 50.57 |
| CDY28023 | Canola | cytosol | 38.77 | 50.15 |
| CDY48738 | Canola | cytosol | 38.06 | 50.0 |
| CDY05697 | Canola | cytosol | 38.06 | 50.0 |
| CDY35957 | Canola | cytosol | 38.53 | 49.85 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 37.83 | 48.93 |
| CDY56199 | Canola | cytosol | 47.52 | 48.67 |
| CDX86322 | Canola | cytosol | 39.48 | 48.55 |
| CDY64894 | Canola | cytosol, mitochondrion | 29.08 | 47.67 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 36.64 | 47.55 |
| KRH43755 | Soybean | cytosol | 36.17 | 46.65 |
| CDY20194 | Canola | cytosol | 48.7 | 44.11 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 34.52 | 43.98 |
| CDY28366 | Canola | cytosol | 48.46 | 43.9 |
| CDY43093 | Canola | cytosol | 8.27 | 43.21 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 33.33 | 43.12 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 33.33 | 43.12 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 33.1 | 42.81 |
| KXG34722 | Sorghum | cytosol | 34.04 | 42.73 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 32.86 | 42.51 |
| CDY03963 | Canola | cytosol | 46.81 | 42.4 |
| CDX92073 | Canola | cytosol | 47.28 | 42.37 |
| CDY03958 | Canola | cytosol | 45.63 | 41.42 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 44.92 | 41.04 |
| PGSC0003DMT400046550 | Potato | cytosol | 10.87 | 40.71 |
| CDY60589 | Canola | cytosol | 72.34 | 38.64 |
| Zm00001d019221_P001 | Maize | cytosol | 33.81 | 37.43 |
| CDY24063 | Canola | cytosol, mitochondrion | 25.06 | 37.32 |
| CDY67946 | Canola | cytosol | 12.06 | 14.53 |
| CDX75043 | Canola | cytosol | 15.6 | 14.47 |
| CDY49133 | Canola | mitochondrion, nucleus | 16.55 | 14.29 |
| CDY42440 | Canola | mitochondrion | 16.31 | 14.26 |
| CDY26745 | Canola | nucleus | 16.78 | 13.73 |
| CDY19228 | Canola | nucleus | 16.78 | 13.73 |
| CDX96712 | Canola | mitochondrion | 16.78 | 13.55 |
| CDX84132 | Canola | cytosol | 15.84 | 13.54 |
| CDX83831 | Canola | nucleus | 17.02 | 13.48 |
| CDX75048 | Canola | cytosol, plastid | 15.6 | 13.25 |
| CDY58438 | Canola | cytosol | 15.13 | 12.72 |
| CDY11290 | Canola | cytosol | 15.13 | 12.72 |
| CDY27769 | Canola | cytosol | 19.15 | 12.16 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 19.15 | 12.16 |
| CDY18797 | Canola | cytosol | 19.15 | 12.16 |
| CDY18777 | Canola | cytosol | 18.91 | 12.03 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 18.68 | 11.79 |
| CDY40708 | Canola | cytosol | 18.44 | 11.71 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 18.44 | 11.71 |
| CDY05568 | Canola | plastid | 18.2 | 11.54 |
| CDX73059 | Canola | cytosol, mitochondrion | 15.84 | 11.51 |
| CDY13903 | Canola | mitochondrion | 17.97 | 11.28 |
| CDX96521 | Canola | mitochondrion | 16.08 | 11.04 |
| CDY34042 | Canola | nucleus | 17.26 | 11.01 |
| CDX92598 | Canola | mitochondrion | 17.97 | 10.86 |
| CDY65828 | Canola | cytosol | 8.27 | 10.77 |
| CDX75045 | Canola | cytosol | 15.6 | 7.87 |
| CDX83165 | Canola | nucleus | 17.02 | 7.26 |
| CDY21313 | Canola | cytosol | 13.48 | 5.75 |
| CDX90875 | Canola | cytosol | 13.48 | 5.65 |
| CDY43091 | Canola | cytosol | 1.18 | 4.42 |
| CDY72137 | Canola | cytosol | 1.18 | 3.25 |
Protein Annotations
| Gene3D:2.100.10.30 | Gene3D:2.120.10.80 | MapMan:9.5.2.2 | UniProt:A0A078JDP7 | EnsemblPlants:CDY65743 | ProteinID:CDY65743 |
| ProteinID:CDY65743.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00048150001 | InterPro:IPR001229 |
| InterPro:IPR015915 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_sf | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 |
| InterPro:Kelch_2 | PFAM:PF01344 | PFAM:PF01419 | PFAM:PF07646 | PFAM:PF13415 | PFscan:PS51752 |
| PANTHER:PTHR23244 | PANTHER:PTHR23244:SF401 | SMART:SM00612 | SMART:SM00915 | SUPFAM:SSF117281 | SUPFAM:SSF51101 |
| UniParc:UPI0004EDB863 | : | : | : | : | : |
Description
BnaA06g37510DBnaA06g37510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDP7]
Coordinates
chrLK034931:+:15309..16994
Molecular Weight (calculated)
46635.6 Da
IEP (calculated)
7.651
GRAVY (calculated)
-0.198
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIQIQFSVD YPNEYVISVG GSYDHVDDYF KTVLIKSLIF KTNKGRTSPV FGGITESGQP AATEFTLEGK YGEKLIGFFG RSGQALDAIG AYFSPTPMLR
101: GKWIQVEQQG KGPGPRCSHA IAMVGQKMYS FGGELTPNFH IDQHLYVFDF NTRTWSLAPP NGEVPELACL GVGMVAIGTT LYVFGGRDGN RYYNGFHSYD
201: TVKNEWKLIT HVDNVPTPRS FHAVAADDKN VYVFGGVSKT VRVNTLHAYN IVDQKWTELP NPGESCKARG GLGLAVVQGK IWVVYGFIGD EVDDVHCFDP
301: VERKWTKVET RGEKPSARSV FGLAVVGKYI IISGGEIEMD PQAHLGLSCW ILRVHIKAHT KAHIMIQYEV FVNNVTREGH SPRGWCASTT ASIDGKKGLL
401: MYGGKAPTNG RYDDIFFYGV DSA
101: GKWIQVEQQG KGPGPRCSHA IAMVGQKMYS FGGELTPNFH IDQHLYVFDF NTRTWSLAPP NGEVPELACL GVGMVAIGTT LYVFGGRDGN RYYNGFHSYD
201: TVKNEWKLIT HVDNVPTPRS FHAVAADDKN VYVFGGVSKT VRVNTLHAYN IVDQKWTELP NPGESCKARG GLGLAVVQGK IWVVYGFIGD EVDDVHCFDP
301: VERKWTKVET RGEKPSARSV FGLAVVGKYI IISGGEIEMD PQAHLGLSCW ILRVHIKAHT KAHIMIQYEV FVNNVTREGH SPRGWCASTT ASIDGKKGLL
401: MYGGKAPTNG RYDDIFFYGV DSA
001: MVQKVEARGG EIGDVWDDGA YDGVRKVYVG QGEDGIAFVK FEYVNGSQEV VGDERGKKTL LGAEEFEVDP DDYIVYVEGY HEKVFGVTTK EIISTLTFKT
101: YKGKTSPPFG IVSGTKFVLQ GGKIVGFHGR STDVLHSLGA YISSPATPKL RGKWIKVEQK GEGPGPRCSH DIAQVGNKIF SFGGELTPNQ PIDKHLYVFD
201: LETRTWSISP ATGDVPNLSC LGVRMVSIGS SLYVFGGRDA SRKYNGFYSF DTTKNEWKLL TPVEQGPTPR SFHSMTADEN NVYVFGGVSA TVRLKTLDAY
301: NIVDHKWVQC STPGGSCSVR GGAGLEVVQG KVWVVYGFNG CEVDDVHCYD PAQDKWTQVE TFGEKPCARS VFASAVVGKH ILVFGGEIAM DPKAHEGPGQ
401: LSGGTFALDT ETLKWEKLDK LGEEEETPSI RGWSASTTGT IDGKKGLVMF GGKAQTNDRF GDLFFYGVDS A
101: YKGKTSPPFG IVSGTKFVLQ GGKIVGFHGR STDVLHSLGA YISSPATPKL RGKWIKVEQK GEGPGPRCSH DIAQVGNKIF SFGGELTPNQ PIDKHLYVFD
201: LETRTWSISP ATGDVPNLSC LGVRMVSIGS SLYVFGGRDA SRKYNGFYSF DTTKNEWKLL TPVEQGPTPR SFHSMTADEN NVYVFGGVSA TVRLKTLDAY
301: NIVDHKWVQC STPGGSCSVR GGAGLEVVQG KVWVVYGFNG CEVDDVHCYD PAQDKWTQVE TFGEKPCARS VFASAVVGKH ILVFGGEIAM DPKAHEGPGQ
401: LSGGTFALDT ETLKWEKLDK LGEEEETPSI RGWSASTTGT IDGKKGLVMF GGKAQTNDRF GDLFFYGVDS A
Arabidopsis Description
NSP2nitrile specifier protein 2 [Source:TAIR;Acc:AT2G33070]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.