Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
plastid: 27992503 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 81.93 | 83.18 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 81.93 | 83.18 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 81.63 | 82.87 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 81.33 | 82.57 |
| KXG34722 | Sorghum | cytosol | 82.83 | 81.6 |
| Zm00001d019221_P001 | Maize | cytosol | 82.23 | 71.47 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 66.57 | 67.79 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 64.16 | 65.14 |
| CDY35957 | Canola | cytosol | 64.16 | 65.14 |
| CDY28023 | Canola | cytosol | 64.16 | 65.14 |
| KRH43755 | Soybean | cytosol | 63.86 | 64.63 |
| AT3G07720.1 | Thale cress | cytosol | 63.25 | 63.83 |
| PGSC0003DMT400046550 | Potato | cytosol | 21.69 | 63.72 |
| Bra029671.1-P | Field mustard | cytosol | 23.19 | 63.64 |
| CDY05697 | Canola | cytosol | 52.41 | 54.04 |
| CDY48738 | Canola | cytosol | 52.11 | 53.73 |
| Bra020713.1-P | Field mustard | cytosol | 18.98 | 52.94 |
| Bra037506.1-P | Field mustard | cytosol | 51.2 | 52.8 |
| CDX85317 | Canola | cytosol | 51.2 | 52.8 |
| AT5G48180.1 | Thale cress | cytosol | 49.7 | 50.61 |
| CDX86322 | Canola | cytosol | 51.2 | 49.42 |
| CDY30169 | Canola | cytosol | 46.08 | 47.37 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 48.49 | 45.87 |
| CDY52048 | Canola | plastid | 48.19 | 45.58 |
| Bra037958.1-P | Field mustard | cytosol | 35.24 | 44.49 |
| CDY36630 | Canola | cytosol | 45.78 | 44.31 |
| AT1G54040.2 | Thale cress | cytosol | 45.48 | 44.28 |
| CDY51408 | Canola | cytosol | 45.18 | 43.73 |
| Bra039702.1-P | Field mustard | cytosol | 34.64 | 43.73 |
| CDX94790 | Canola | cytosol | 43.98 | 42.57 |
| CDY08215 | Canola | cytosol | 44.58 | 42.53 |
| CDX96969 | Canola | peroxisome | 43.67 | 42.27 |
| CDY49014 | Canola | cytosol | 43.67 | 42.27 |
| CDY30681 | Canola | cytosol | 43.07 | 41.09 |
| CDY64894 | Canola | cytosol, mitochondrion | 31.63 | 40.7 |
| CDY56199 | Canola | cytosol | 46.99 | 37.77 |
| CDX92073 | Canola | cytosol | 50.0 | 35.17 |
| CDY20194 | Canola | cytosol | 49.1 | 34.9 |
| CDY03963 | Canola | cytosol | 49.1 | 34.9 |
| AT3G16400.1 | Thale cress | cytosol | 49.4 | 34.89 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 48.19 | 34.56 |
| CDY03958 | Canola | cytosol | 48.49 | 34.55 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 43.98 | 34.52 |
| CDY28366 | Canola | cytosol | 48.49 | 34.48 |
| AT2G33070.3 | Thale cress | cytosol | 48.8 | 34.25 |
| AT3G16390.2 | Thale cress | cytosol | 47.59 | 33.83 |
| Bra040923.1-P | Field mustard | cytosol | 48.19 | 31.43 |
| CDY24063 | Canola | cytosol, mitochondrion | 25.6 | 29.93 |
| AT3G16410.1 | Thale cress | cytosol | 47.89 | 25.69 |
| Bra022157.1-P | Field mustard | cytosol | 9.34 | 24.6 |
| Bra018943.1-P | Field mustard | cytosol | 14.16 | 23.38 |
| Bra021175.1-P | Field mustard | cytosol | 16.27 | 20.85 |
| Bra018944.1-P | Field mustard | cytosol | 46.99 | 19.7 |
| CDY60589 | Canola | cytosol | 46.69 | 19.57 |
| Os12t0540800-01 | Rice | extracellular | 23.8 | 14.99 |
| Bra022159.1-P | Field mustard | cytosol | 11.45 | 14.39 |
| Os03t0835800-02 | Rice | cytosol | 21.08 | 13.97 |
| Os02t0822800-01 | Rice | cytosol | 21.08 | 13.49 |
| Os01t0300900-01 | Rice | cytosol | 24.7 | 13.14 |
| Os04t0483600-01 | Rice | nucleus | 25.3 | 12.69 |
| Os03t0835600-01 | Rice | plastid | 22.89 | 11.6 |
| Os11t0657000-01 | Rice | mitochondrion | 5.42 | 11.11 |
| Os12t0538800-01 | Rice | mitochondrion, nucleus | 19.88 | 9.46 |
| Os07t0515000-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:4346503 | EMBL:AJ698083 | EMBL:AK072805 | ProteinID:BAF24584.1 |
| ProteinID:BAT07032.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | EnsemblPlantsGene:Os09g0249000 | EnsemblPlants:Os09t0249000-01 | PFAM:PF01344 | PFAM:PF13415 | PFAM:PF13418 |
| PANTHER:PTHR23244 | PANTHER:PTHR23244:SF401 | UniProt:Q6ZXK6 | SUPFAM:SSF117281 | UniParc:UPI000035A45D | RefSeq:XP_015612215.1 |
| SEG:seg | : | : | : | : | : |
Description
Galactose oxidase/kelch, beta-propeller domain containing protein. (Os09t0249000-01)
Coordinates
chr9:-:3732475..3734886
Molecular Weight (calculated)
34427.0 Da
IEP (calculated)
4.806
GRAVY (calculated)
-0.226
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMAAGTWVK LEQKGDGPGA RSSHAITLVG GTAYAFGGEF TPRVPVDNAM YAFDLKSQCW SALDASGDVP PPRVGVTMAS VGATVYMFGG RDQEHKELNE
101: LYSFDTATNR WTLLSSGAGD GPPHRSYHSM VADAAGGGKV YVFGGCGDAG RLNDLWAYDV AAGRWEALPS PGEACKPRGG PGLAVAGGKV WVVYGFSGEE
201: LDDVHCYDPG TGAWSTVETT GGGGGGDKPS PRSVFCAAGI GKHVVVFGGE VDPSDLGHLG AGKFSAEAFA LDTETGAWAR LDDAGEHHPG PRGWCAFSAG
301: EVDGRRGLLV YGGNSPTNDR LGDIYFFTPP LA
101: LYSFDTATNR WTLLSSGAGD GPPHRSYHSM VADAAGGGKV YVFGGCGDAG RLNDLWAYDV AAGRWEALPS PGEACKPRGG PGLAVAGGKV WVVYGFSGEE
201: LDDVHCYDPG TGAWSTVETT GGGGGGDKPS PRSVFCAAGI GKHVVVFGGE VDPSDLGHLG AGKFSAEAFA LDTETGAWAR LDDAGEHHPG PRGWCAFSAG
301: EVDGRRGLLV YGGNSPTNDR LGDIYFFTPP LA
001: MAATPMEGKW VQLKQKGTGP GARSSHAIAL VGNKMYAFGG EFQPRVPVDN QLYVFDLETQ TWSIQEASGD APPPRVGVAM AAVGPIIYFF GGRDSTHQEL
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK
Arabidopsis Description
AT3g07720/F17A17_6 [Source:UniProtKB/TrEMBL;Acc:Q9S7W4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.