Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72137 | Canola | cytosol | 29.98 | 90.91 |
| CDY03958 | Canola | cytosol | 87.37 | 87.55 |
| CDX92073 | Canola | cytosol | 86.51 | 85.59 |
| CDY43093 | Canola | cytosol | 14.78 | 85.19 |
| CDY30169 | Canola | cytosol | 58.67 | 84.83 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 82.23 | 82.94 |
| CDY20194 | Canola | cytosol | 82.87 | 82.87 |
| CDY56199 | Canola | cytosol | 73.02 | 82.57 |
| CDY28366 | Canola | cytosol | 82.44 | 82.44 |
| CDY43091 | Canola | cytosol | 19.7 | 81.42 |
| AT3G16400.1 | Thale cress | cytosol | 78.16 | 77.66 |
| AT3G16390.2 | Thale cress | cytosol | 75.16 | 75.16 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 48.61 | 64.67 |
| CDY52048 | Canola | plastid | 47.97 | 63.82 |
| Bra022157.1-P | Field mustard | cytosol | 17.13 | 63.49 |
| AT3G16410.1 | Thale cress | cytosol | 76.02 | 57.35 |
| CDY08215 | Canola | cytosol | 41.97 | 56.32 |
| CDY51408 | Canola | cytosol | 41.11 | 55.98 |
| CDY36630 | Canola | cytosol | 40.47 | 55.1 |
| CDY30681 | Canola | cytosol | 40.26 | 54.02 |
| CDY64894 | Canola | cytosol, mitochondrion | 29.76 | 53.88 |
| CDX96969 | Canola | peroxisome | 39.4 | 53.64 |
| CDX94790 | Canola | cytosol | 38.97 | 53.06 |
| CDY48738 | Canola | cytosol | 36.4 | 52.8 |
| CDY49014 | Canola | cytosol | 38.76 | 52.77 |
| CDX85317 | Canola | cytosol | 36.19 | 52.48 |
| CDY05697 | Canola | cytosol | 36.19 | 52.48 |
| CDY35957 | Canola | cytosol | 35.55 | 50.76 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 35.33 | 50.61 |
| CDY28023 | Canola | cytosol | 35.12 | 50.15 |
| CDX86322 | Canola | cytosol | 36.4 | 49.42 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 34.9 | 49.1 |
| KRH43755 | Soybean | cytosol | 34.05 | 48.48 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 33.4 | 47.71 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 32.98 | 47.09 |
| KXG34722 | Sorghum | cytosol | 33.83 | 46.88 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 42.4 | 46.81 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 32.76 | 46.79 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 32.55 | 46.48 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 32.33 | 46.18 |
| Zm00001d019221_P001 | Maize | cytosol | 35.55 | 43.46 |
| CDY24063 | Canola | cytosol, mitochondrion | 26.12 | 42.96 |
| PGSC0003DMT400046550 | Potato | cytosol | 10.28 | 42.48 |
| CDY60589 | Canola | cytosol | 58.03 | 34.22 |
| CDY67946 | Canola | cytosol | 12.85 | 17.09 |
| CDY65828 | Canola | cytosol | 11.56 | 16.62 |
| CDX75043 | Canola | cytosol | 15.85 | 16.23 |
| CDX96712 | Canola | mitochondrion | 17.34 | 15.46 |
| CDY42440 | Canola | mitochondrion | 15.85 | 15.29 |
| CDY19228 | Canola | nucleus | 16.92 | 15.28 |
| CDY26745 | Canola | nucleus | 16.92 | 15.28 |
| CDX84132 | Canola | cytosol | 16.06 | 15.15 |
| CDY49133 | Canola | mitochondrion, nucleus | 15.85 | 15.1 |
| CDX75048 | Canola | cytosol, plastid | 15.85 | 14.86 |
| CDX83831 | Canola | nucleus | 16.7 | 14.61 |
| CDY11290 | Canola | cytosol | 14.35 | 13.32 |
| CDY58438 | Canola | cytosol | 14.13 | 13.12 |
| CDX73059 | Canola | cytosol, mitochondrion | 15.85 | 12.71 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 17.99 | 12.61 |
| CDY27769 | Canola | cytosol | 17.99 | 12.61 |
| CDY05568 | Canola | plastid | 17.77 | 12.44 |
| CDY18797 | Canola | cytosol | 17.56 | 12.31 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 17.56 | 12.24 |
| CDY18777 | Canola | cytosol | 17.34 | 12.18 |
| CDX96521 | Canola | mitochondrion | 16.06 | 12.18 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 17.34 | 12.16 |
| CDY40708 | Canola | cytosol | 17.13 | 12.01 |
| CDY34042 | Canola | nucleus | 16.06 | 11.31 |
| CDY13903 | Canola | mitochondrion | 15.85 | 10.98 |
| CDX92598 | Canola | mitochondrion | 15.85 | 10.57 |
| CDX75045 | Canola | cytosol | 15.85 | 8.82 |
| CDX83165 | Canola | nucleus | 16.06 | 7.56 |
| CDY21313 | Canola | cytosol | 13.92 | 6.55 |
| CDX90875 | Canola | cytosol | 13.92 | 6.44 |
Protein Annotations
| Gene3D:2.100.10.30 | Gene3D:2.120.10.80 | MapMan:9.5.2.2 | EnsemblPlants:CDY03963 | ProteinID:CDY03963 | ProteinID:CDY03963.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0030246 | EnsemblPlantsGene:GSBRNA2T00117480001 | InterPro:IPR001229 |
| InterPro:IPR015915 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | PFAM:PF01344 | PFAM:PF01419 | PFAM:PF13415 | PFscan:PS51752 | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | SMART:SM00612 | SMART:SM00915 | SUPFAM:SSF117281 | SUPFAM:SSF51101 | UniParc:UPI0004EEB1E3 |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g11880D
Coordinates
chrLK031947:+:1107406..1110207
Molecular Weight (calculated)
51608.9 Da
IEP (calculated)
5.783
GRAVY (calculated)
-0.351
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLKLEAKGG KKGNVWDDGV HENVRKVYVG QGQDCISFLK FEYVDGSEVV IGDEHGEKTQ EVEEFVVDVD DYIIYVEAFR ETVTQETIVA LKFETYKGKT
101: NKHIETSPGV KFVLQGGKIV GFHGRSTNGL HALGAYVSFS STLDSLGNWT KVEQKGKAPG LRCSHAIAQV GNKIYSFGGE FTPNVPIDKD LYVFDLKTGK
201: WSIAPATGDI PHLSCLGVRM VSVGKTLYVF GGRDADRKYN GFYSYDTTKN VWKLLTPVEE GPTPRSFHSM AADDKNIYVF GGVSATERLK TLDSYNIVDK
301: KWKQCATPGE SFSIRGGAGL EVVHGKVWVV YGFNGCEIDD VHYYDPVEDK WTQVETFGEK PSARSVFASA VVGKHIVVFG GEVAMDPQAH VGPGQLMDGT
401: FALDTETLKW ERLDKLGEEK EETPEIRGWT ASTSATINGK KGLLMHGGKA QTNDRFEDLF FYEFNSA
101: NKHIETSPGV KFVLQGGKIV GFHGRSTNGL HALGAYVSFS STLDSLGNWT KVEQKGKAPG LRCSHAIAQV GNKIYSFGGE FTPNVPIDKD LYVFDLKTGK
201: WSIAPATGDI PHLSCLGVRM VSVGKTLYVF GGRDADRKYN GFYSYDTTKN VWKLLTPVEE GPTPRSFHSM AADDKNIYVF GGVSATERLK TLDSYNIVDK
301: KWKQCATPGE SFSIRGGAGL EVVHGKVWVV YGFNGCEIDD VHYYDPVEDK WTQVETFGEK PSARSVFASA VVGKHIVVFG GEVAMDPQAH VGPGQLMDGT
401: FALDTETLKW ERLDKLGEEK EETPEIRGWT ASTSATINGK KGLLMHGGKA QTNDRFEDLF FYEFNSA
001: MAQKLEAKGG EMGDVWDDGV YENVRKVYVG QAQYGIAFVK FEYVNGSQVV VGDEHGKKTE LGVEEFEIDA DDYIVYVEGY REKVNDMTSE MITFLSIKTF
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA
Arabidopsis Description
NSP1Nitrile-specifier protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDM9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.