CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73059	Canola	cytosol, mitochondrion	87.5	92.61
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	91.07	84.11
CDY42440	Canola	mitochondrion	61.2	77.89
CDY49133	Canola	mitochondrion, nucleus	61.04	76.73
AT1G74150.1	Thale cress	cytosol, mitochondrion	69.32	75.04
CDY26745	Canola	nucleus	51.62	61.51
CDY19228	Canola	nucleus	50.0	59.57
CDX83831	Canola	nucleus	50.16	57.87
CDX96712	Canola	mitochondrion	49.19	57.82
GSMUA_Achr3P30430_001	Banana	cytosol	38.64	50.64
VIT_17s0000g05150.t01	Wine grape	cytosol	44.81	45.62
KRH63188	Soybean	cytosol	43.67	43.88
KRH54725	Soybean	cytosol	43.18	43.39
Solyc03g114960.2.1	Tomato	nucleus	37.5	42.62
CDY28023	Canola	cytosol	14.45	27.22
CDY35957	Canola	cytosol	14.12	26.61
CDX96969	Canola	peroxisome	12.99	23.32
CDY48738	Canola	cytosol	12.18	23.29
CDY08215	Canola	cytosol	13.15	23.28
CDY30681	Canola	cytosol	12.99	22.99
CDY19142	Canola	cytosol, peroxisome, plastid	12.99	22.79
CDY49014	Canola	cytosol	12.66	22.74
CDX94790	Canola	cytosol	12.66	22.74
CDY05697	Canola	cytosol	11.85	22.67
CDX85317	Canola	cytosol	11.85	22.67
CDY52048	Canola	plastid	12.82	22.51
CDY51408	Canola	cytosol	12.5	22.45
CDY36630	Canola	cytosol	12.34	22.16
CDY64894	Canola	cytosol, mitochondrion	9.09	21.71
CDX86322	Canola	cytosol	12.01	21.51
CDY11290	Canola	cytosol	16.88	20.68
CDY58438	Canola	cytosol	16.56	20.28
CDX75043	Canola	cytosol	14.77	19.96
CDY30169	Canola	cytosol	10.39	19.81
CDX84132	Canola	cytosol	15.26	18.99
CDY24063	Canola	cytosol, mitochondrion	8.44	18.31
CDX75048	Canola	cytosol, plastid	14.77	18.27
CDY67946	Canola	cytosol	10.39	18.23
CDY56199	Canola	cytosol	11.2	16.71
CDY65743	Canola	cytosol, peroxisome, plastid	11.04	16.08
CDY03963	Canola	cytosol	12.18	16.06
CDX92073	Canola	cytosol	11.85	15.47
CDY03958	Canola	cytosol	11.69	15.45
CDY20194	Canola	cytosol	11.69	15.42
CDY28366	Canola	cytosol	11.53	15.2
CDY56200	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.36	15.12
CDY43093	Canola	cytosol	1.95	14.81
CDY18777	Canola	cytosol	15.91	14.74
CDX74147	Canola	cytosol, nucleus, plastid	15.75	14.56
CDY18797	Canola	cytosol	15.75	14.56
CDY40708	Canola	cytosol	15.58	14.41
CDY25029	Canola	cytosol, nucleus, plastid	15.58	14.33
CDY27769	Canola	cytosol	15.42	14.26
CDY05166	Canola	cytosol, nucleus, plastid	15.42	14.26
CDY05568	Canola	plastid	15.42	14.24
CDY34042	Canola	nucleus	15.1	14.03
CDY13903	Canola	mitochondrion	13.15	12.02
CDX92598	Canola	mitochondrion	13.15	11.57
CDX75045	Canola	cytosol	15.26	11.2
CDY21313	Canola	cytosol	16.23	10.08
CDX90875	Canola	cytosol	16.23	9.91
CDY60589	Canola	cytosol	12.18	9.47
CDX83165	Canola	nucleus	14.77	9.17
CDY65828	Canola	cytosol	0.81	1.54
CDY43091	Canola	cytosol	0.16	0.88
CDY72137	Canola	cytosol	0.16	0.65

Protein Annotations

EnsemblPlants:CDX96521	EnsemblPlantsGene:GSBRNA2T00102703001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401
PFAM:PF01344	PFAM:PF13415	PFAM:PF13418	ProteinID:CDX96521	ProteinID:CDX96521.1	SEG:seg
SUPFAM:SSF50965	UniParc:UPI0004EDC44C	MapMan:35.1	:	:	:

Description

BnaA07g31320D

Coordinates

chrLK031894:+:1196010..1199772

Molecular Weight (calculated)

66864.8 Da

IEP (calculated)

5.578

GRAVY (calculated)

-0.523

Length

616 amino acids

Sequence
(BLAST)

001: MASIHMGGGA MLRLSRLRLP SLRTQNREST FYPLKKMRWE RVRRQNQQVG LGDSSSGPGK RWGHTCNAVK GGRFVYVFGG FGRDDCLTNQ VHVFDAGTQI
101: WTKPVIRGVP PSPRDSHSCT TVGDHLFVFG GTDGKNHLND LHVLDTSSHT WKCVDVRGEG PEAREAHSAT LVGKRIFIFG GCGKASGSGD EVFYNDLYTL
201: NTETLTWQRA VTAGNPPSAR DSHTCSTWKN KIIVVGGEDL DDYYYSDVHI LDTETFEWKQ MKTSGQVLTP RAGHVTVALE RNLFVFGGFT DSQNLYDDLY
301: VLDVETGVWS KLVHAMEEGP SARFSAGAVS LGPYKAGSFF FVGGCNKNLE PLDDIYYLHT DGGYNARFDH TPGRFSLRKQ MKLKCQAQKL AVAGTSTNQG
401: VETLPMSIGS MYQGKTVFHA RVTENVPLGY SIETIIDGKV LRGFLFSNRQ SSVQTVDPSV SSGKRPAMSD ADCDHGAKSQ RTLSEDAAGS SQQAGPVDPS
501: DDANKKVADS NVMDTSMIEK ADANVNIVRQ QEAETAAVAS DVKDQDPSQL NMDGVNAEPS PVNLDQGNVE PLSNEMSTDV DAATEAGPGG DSSPQNQDEG
601: TVAAEDADAD QKPQPH

Best Arabidopsis Sequence Match ( AT1G74150.2 )
(BLAST)

001: MRWERVQQVG LGDSSSFGPG KRWGHTCNAI KGGRFLYVFG GFGRDNCLTN QVHVFDAETQ IWIRPEINGV PPCPRDSHSC TTVGDNLFVF GGTDGTKYLN
101: DVHILDTYSH TWIRPDIRGE GPRVREAHSA ALVDKRLFIF GGCGKSSDSD DEVFYNDLYI LNTETYMWKR AVTSGKPPSA RDSHTCSAWK NKIIVVGGED
201: LDDYYLSDVH ILDTDKFVWK ELKTSGQVLT PRAGHVTVAL ERNLFVFGGF TDSQNLYDDL YVLDLETGVW SKVVAMVEGP SARFSSAAVC LDPYKAGSFF
301: FVGGCNKNLE PLDDIYYLHT EGRYDVRFHQ NPGRSSLRKQ MKLKCQGQEL TVAKTNIDHG RENVPLNIGY IDQRKPMFQA RVTENAPLGY TIETIIDGKV
401: LRGVLFSNRH SSVRIADSSI SSRERPATSD GDCDHRAKIP RTFSKDPAGS SQQAGPTDPS DDTNKKVADS NDTDTPMIDT VDANVNMEGT HEAETAAVTI
501: DAKDQDASQL DKGIVNTDPL PVSHDQVNVI STDAAKADPG VDSSTRKQEE GTSAEEDANV GPQPQQH

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTV1]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.