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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY19142 Canola cytosol, peroxisome, plastid 99.15 99.15
CDY30169 Canola cytosol 58.97 64.09
CDY43093 Canola cytosol 13.39 58.02
CDX96969 Canola peroxisome 54.99 56.27
CDY51408 Canola cytosol 54.13 55.39
CDX94790 Canola cytosol 53.56 54.81
CDY36630 Canola cytosol 53.28 54.52
CDX85317 Canola cytosol 49.86 54.35
CDY05697 Canola cytosol 49.86 54.35
CDY08215 Canola cytosol 53.85 54.31
CDY49014 Canola cytosol 52.99 54.23
CDY48738 Canola cytosol 49.29 53.73
CDY64894 Canola cytosol, mitochondrion 39.03 53.1
CDX86322 Canola cytosol 50.71 51.74
CDY30681 Canola cytosol 51.28 51.72
CDY35957 Canola cytosol 48.15 51.68
CDY28023 Canola cytosol 47.58 51.07
CDY56199 Canola cytosol 59.83 50.85
VIT_12s0057g01080.t01 Wine grape cytosol 46.15 49.54
KRH43755 Soybean cytosol 46.15 49.39
Os09t0249000-01 Rice cytosol, plasma membrane, plastid 45.58 48.19
CDY03963 Canola cytosol 63.82 47.97
CDY20194 Canola cytosol 63.82 47.97
Solyc05g024410.2.1 Tomato cytosol, extracellular, plastid 44.16 47.55
KXG34722 Sorghum cytosol 45.58 47.48
CDY28366 Canola cytosol 62.96 47.32
CDY65743 Canola cytosol, peroxisome, plastid 56.98 47.28
CDX92073 Canola cytosol 63.53 47.25
CDY03958 Canola cytosol 61.82 46.57
HORVU5Hr1G051310.1 Barley cytosol, mitochondrion, peroxisome 43.3 46.48
CDY56200 Canola endoplasmic reticulum, extracellular, plasma membrane 61.25 46.44
TraesCS5B01G165000.1 Wheat mitochondrion 43.02 46.18
TraesCS5D01G172400.1 Wheat mitochondrion 43.02 46.18
TraesCS5A01G168200.1 Wheat mitochondrion 42.73 45.87
Zm00001d019221_P001 Maize cytosol 46.15 42.41
PGSC0003DMT400046550 Potato cytosol 13.39 41.59
CDY24063 Canola cytosol, mitochondrion 32.76 40.49
CDY60589 Canola cytosol 61.54 27.27
CDY49133 Canola mitochondrion, nucleus 22.51 16.12
CDY42440 Canola mitochondrion 22.22 16.12
CDY19228 Canola nucleus 23.36 15.86
CDY26745 Canola nucleus 23.08 15.67
CDX96712 Canola mitochondrion 22.51 15.08
CDX83831 Canola nucleus 22.22 14.61
CDX75043 Canola cytosol 18.8 14.47
CDY67946 Canola cytosol 13.96 13.96
CDY58438 Canola cytosol 19.94 13.92
CDY11290 Canola cytosol 19.94 13.92
CDX73059 Canola cytosol, mitochondrion 22.51 13.57
CDX84132 Canola cytosol 19.09 13.54
CDX75048 Canola cytosol, plastid 19.09 13.45
CDX96521 Canola mitochondrion 22.51 12.82
CDY05568 Canola plastid 22.79 11.99
CDY25029 Canola cytosol, nucleus, plastid 22.79 11.94
CDY05166 Canola cytosol, nucleus, plastid 22.51 11.86
CDY27769 Canola cytosol 22.51 11.86
CDY18777 Canola cytosol 22.22 11.73
CDY13903 Canola mitochondrion 22.22 11.57
CDY18797 Canola cytosol 21.94 11.56
CDX74147 Canola cytosol, nucleus, plastid 21.94 11.56
CDY40708 Canola cytosol 21.65 11.41
CDX92598 Canola mitochondrion 22.22 11.14
CDY34042 Canola nucleus 20.51 10.86
CDY43091 Canola cytosol 2.85 8.85
CDX75045 Canola cytosol 18.8 7.87
CDX83165 Canola nucleus 20.23 7.16
CDY72137 Canola cytosol 2.85 6.49
CDY21313 Canola cytosol 18.23 6.45
CDX90875 Canola cytosol 17.95 6.24
CDY65828 Canola cytosol 3.7 4.0
Protein Annotations
EnsemblPlants:CDY52048EnsemblPlantsGene:GSBRNA2T00004759001Gene3D:2.120.10.80GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:Gal_Oxase/kelch_b-propellerInterPro:IPR015915InterPro:Kelch-typ_b-propellerInterPro:Kelch_1PANTHER:PTHR23244PANTHER:PTHR23244:SF401
PFAM:PF01344PFAM:PF13415ProteinID:CDY52048ProteinID:CDY52048.1SUPFAM:SSF50965UniParc:UPI0004EF4D75
UniProt:A0A078ISN5MapMan:9.5.2.2::::
Description
BnaCnng21640DBnaCnng21640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISN5]
Coordinates
chrLK033050:+:40027..42402
Molecular Weight (calculated)
37996.1 Da
IEP (calculated)
5.882
GRAVY (calculated)
-0.154
Length
351 amino acids
Sequence
(BLAST)
001: MNIAGIVPTL HEAIAPTFHG EWIKVEQKGK GPGPRSSHAI AVVGDKLYSF GGELTSNVPV DKDLYVFDLN THTWSVAPAT GDIPTLSCLG VAMVAVGSTL
101: YVFGGRDASR KYNGFYSYDT VKNEWKLVTG VEEGPEARSF HSMASDAENV YLFGGVSKTV RLKTLNAFNV SDEKWVQLPT PGDSCKERGG AGLVVVQGKV
201: WVFYGFYGDE CDDIHCFDVD RNVWTKVETT GEKPSPRSVF AIAAVGKHVI VVGGEIEMDP QAHVGPGKLC GKGFVLDTET LEWKKLEDGG GEAPTEPRGW
301: CASTAATING KKGMLIFGGK AQTNNRFDDL YFYSVKELNP LINVRVGLGL F
Best Arabidopsis Sequence Match ( AT2G33070.1 )
(BLAST)
001: MVQKVEARGG EIGDVWDDGA YDGVRKVYVG QGEDGIAFVK FEYVNGSQEV VGDERGKKTL LGAEEFEVDP DDYIVYVEGY HEKVFGVTTK EIISTLTFKT
101: YKGKTSPPFG IVSGTKFVLQ GGKIVGFHGR STDVLHSLGA YISSPATPKL RGKWIKVEQK GEGPGPRCSH DIAQVGNKIF SFGGELTPNQ PIDKHLYVFD
201: LETRTWSISP ATGDVPNLSC LGVRMVSIGS SLYVFGGRDA SRKYNGFYSF DTTKNEWKLL TPVEQGPTPR SFHSMTADEN NVYVFGGVSA TVRLKTLDAY
301: NIVDHKWVQC STPGGSCSVR GGAGLEVVQG KVWVVYGFNG CEVDDVHCYD PAQDKWTQVE TFGEKPCARS VFASAVVGKH ILVFGGEIAM DPKAHEGPGQ
401: LSGGTFALDT ETLKWEKLDK LGEEEETPSI RGWSASTTGT IDGKKGLVMF GGKAQTNDRF GDLFFYGVDS A
Arabidopsis Description
NSP2nitrile specifier protein 2 [Source:TAIR;Acc:AT2G33070]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.