CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96521	Canola	mitochondrion	92.61	87.5
CDY42440	Canola	mitochondrion	63.06	75.83
CDY49133	Canola	mitochondrion, nucleus	62.89	74.69
AT1G74150.1	Thale cress	cytosol, mitochondrion	73.02	74.69
CDY26745	Canola	nucleus	53.26	59.96
CDY19228	Canola	nucleus	51.72	58.22
CDX96712	Canola	mitochondrion	50.69	56.3
CDX83831	Canola	nucleus	51.55	56.18
GSMUA_Achr3P30430_001	Banana	cytosol	40.89	50.64
VIT_17s0000g05150.t01	Wine grape	cytosol	47.59	45.79
KRH63188	Soybean	cytosol	44.5	42.25
KRH54725	Soybean	cytosol	44.16	41.92
Solyc03g114960.2.1	Tomato	nucleus	39.0	41.88
CDY28023	Canola	cytosol	14.78	26.3
CDY35957	Canola	cytosol	14.43	25.69
CDX96969	Canola	peroxisome	13.57	23.03
CDY08215	Canola	cytosol	13.75	22.99
CDY48738	Canola	cytosol	12.71	22.98
CDY19142	Canola	cytosol, peroxisome, plastid	13.75	22.79
CDY30681	Canola	cytosol	13.57	22.7
CDY52048	Canola	plastid	13.57	22.51
CDY51408	Canola	cytosol	13.23	22.45
CDY49014	Canola	cytosol	13.23	22.45
CDX94790	Canola	cytosol	13.23	22.45
CDY05697	Canola	cytosol	12.37	22.36
CDX85317	Canola	cytosol	12.37	22.36
CDY36630	Canola	cytosol	12.89	21.87
CDX86322	Canola	cytosol	12.54	21.22
CDY64894	Canola	cytosol, mitochondrion	9.28	20.93
CDY11290	Canola	cytosol	17.87	20.68
CDY58438	Canola	cytosol	17.53	20.28
CDY30169	Canola	cytosol	11.0	19.81
CDX75043	Canola	cytosol	15.46	19.74
CDX84132	Canola	cytosol	15.81	18.59
CDY24063	Canola	cytosol, mitochondrion	8.76	17.96
CDY67946	Canola	cytosol	10.82	17.95
CDX75048	Canola	cytosol, plastid	15.29	17.87
CDY56199	Canola	cytosol	11.68	16.46
CDY03963	Canola	cytosol	12.71	15.85
CDY65743	Canola	cytosol, peroxisome, plastid	11.51	15.84
CDX92073	Canola	cytosol	12.37	15.25
CDY03958	Canola	cytosol	12.2	15.24
CDY20194	Canola	cytosol	12.03	14.99
CDY56200	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.86	14.9
CDY43093	Canola	cytosol	2.06	14.81
CDY28366	Canola	cytosol	11.86	14.78
CDY18777	Canola	cytosol	16.15	14.14
CDY18797	Canola	cytosol	15.98	13.96
CDX74147	Canola	cytosol, nucleus, plastid	15.81	13.81
CDY40708	Canola	cytosol	15.64	13.66
CDY27769	Canola	cytosol	15.64	13.66
CDY05166	Canola	cytosol, nucleus, plastid	15.64	13.66
CDY25029	Canola	cytosol, nucleus, plastid	15.64	13.58
CDY05568	Canola	plastid	15.46	13.49
CDY34042	Canola	nucleus	15.12	13.27
CDY13903	Canola	mitochondrion	14.43	12.46
CDX92598	Canola	mitochondrion	14.43	12.0
CDX75045	Canola	cytosol	16.15	11.2
CDY21313	Canola	cytosol	16.49	9.68
CDX90875	Canola	cytosol	16.67	9.61
CDY60589	Canola	cytosol	12.37	9.09
CDX83165	Canola	nucleus	14.78	8.67
CDY65828	Canola	cytosol	0.86	1.54
CDY43091	Canola	cytosol	0.17	0.88
CDY72137	Canola	cytosol	0.17	0.65

Protein Annotations

EnsemblPlants:CDX73059	EnsemblPlantsGene:GSBRNA2T00103504001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401
PFAM:PF01344	PFAM:PF13418	ProteinID:CDX73059	ProteinID:CDX73059.1	SEG:seg	SUPFAM:SSF50965
UniParc:UPI0004EE548B	MapMan:35.1	:	:	:	:

Description

BnaC06g35070D

Coordinates

chrLK031797:+:1859153..1862220

Molecular Weight (calculated)

62949.0 Da

IEP (calculated)

5.016

GRAVY (calculated)

-0.488

Length

582 amino acids

Sequence
(BLAST)

001: MRWERVRRQN QQVGLGDSSS GPGKRWGHTC NAIKGGRFVY VFGGFGRDDC LTNQVNVFDA GTQIWTKPVI RGVPPSPRDS HSCTTVGDHL FVFGGTDGKN
101: HLKDLHVLDT SSHTWKCVDA RGEGPEAREA HSATLVGKRI FIFGGCGKAS GSDDEVFYND LFILNTETLT WQRAETTGNP PSARDSHTCS AWKNKIIVVG
201: GEDLDDYYYS DVHILDTETF VWKQMKTLGQ VLTPRAGHVT VALERNLFVF GGFTDSQNLY DDLYVLDVET GVWSKLVHAI EEGPSARFSA GAVSLGPYKA
301: GSFFFLGGCS KNLEPLDDIY YLHTDGGYNA RFDQTPGRFS IRKQMKLKCQ AQKLAVAGTS TNQGVGNLPM SIGIGLIDQR KTVFHARVTE NVPLGYSIET
401: IIDGKVLRGF LFSNRHSSGQ TADSSVSSGK RPAMLDADCD HGAKSQRILS EDAAGSSQQA GSVDPSDDAN KKVTDSDVMD TSMIDTADAN VNIVRPQEAE
501: TAAVASDVKD QDPSQLNMDA VNAEPSPVTL DQGNVEPLRN ETSTDVGAAT EAGPRGDSSP QNQDEGTVAA EDADADQKPQ PH

Best Arabidopsis Sequence Match ( AT1G74150.2 )
(BLAST)

001: MRWERVQQVG LGDSSSFGPG KRWGHTCNAI KGGRFLYVFG GFGRDNCLTN QVHVFDAETQ IWIRPEINGV PPCPRDSHSC TTVGDNLFVF GGTDGTKYLN
101: DVHILDTYSH TWIRPDIRGE GPRVREAHSA ALVDKRLFIF GGCGKSSDSD DEVFYNDLYI LNTETYMWKR AVTSGKPPSA RDSHTCSAWK NKIIVVGGED
201: LDDYYLSDVH ILDTDKFVWK ELKTSGQVLT PRAGHVTVAL ERNLFVFGGF TDSQNLYDDL YVLDLETGVW SKVVAMVEGP SARFSSAAVC LDPYKAGSFF
301: FVGGCNKNLE PLDDIYYLHT EGRYDVRFHQ NPGRSSLRKQ MKLKCQGQEL TVAKTNIDHG RENVPLNIGY IDQRKPMFQA RVTENAPLGY TIETIIDGKV
401: LRGVLFSNRH SSVRIADSSI SSRERPATSD GDCDHRAKIP RTFSKDPAGS SQQAGPTDPS DDTNKKVADS NDTDTPMIDT VDANVNMEGT HEAETAAVTI
501: DAKDQDASQL DKGIVNTDPL PVSHDQVNVI STDAAKADPG VDSSTRKQEE GTSAEEDANV GPQPQQH

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTV1]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.