Factsheet for Bra018944.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60589	Canola	cytosol	99.24	99.24
Bra018943.1-P	Field mustard	cytosol	17.05	67.16
Bra021175.1-P	Field mustard	cytosol	17.17	52.51
Bra037958.1-P	Field mustard	cytosol	17.42	52.47
Bra037506.1-P	Field mustard	cytosol	21.21	52.17
Bra039702.1-P	Field mustard	cytosol	16.92	50.95
Bra040923.1-P	Field mustard	cytosol	32.7	50.88
Bra029671.1-P	Field mustard	cytosol	7.58	49.59
VIT_12s0057g01080.t01	Wine grape	cytosol	20.33	49.24
Solyc05g024410.2.1	Tomato	cytosol, extracellular, plastid	19.95	48.47
KRH43755	Soybean	cytosol	19.82	47.87
HORVU5Hr1G051310.1	Barley	cytosol, mitochondrion, peroxisome	19.7	47.71
TraesCS5B01G165000.1	Wheat	mitochondrion	19.57	47.4
TraesCS5D01G172400.1	Wheat	mitochondrion	19.57	47.4
TraesCS5A01G168200.1	Wheat	mitochondrion	19.44	47.09
Os09t0249000-01	Rice	cytosol, plasma membrane, plastid	19.7	46.99
KXG34722	Sorghum	cytosol	19.57	45.99
PGSC0003DMT400046550	Potato	cytosol	6.44	45.13
Bra022159.1-P	Field mustard	cytosol	14.14	42.42
Bra020713.1-P	Field mustard	cytosol	6.31	42.02
Zm00001d019221_P001	Maize	cytosol	20.2	41.88
Bra022157.1-P	Field mustard	cytosol	5.68	35.71
Bra040844.1-P	Field mustard	cytosol	3.03	18.05
Bra025672.1-P	Field mustard	nucleus	10.1	15.47
Bra016550.1-P	Field mustard	mitochondrion	9.97	15.08
Bra008135.1-P	Field mustard	mitochondrion, nucleus	9.09	14.72
Bra039439.1-P	Field mustard	cytosol	12.37	14.69
Bra005274.1-P	Field mustard	cytosol	6.82	14.48
Bra040219.1-P	Field mustard	cytosol	11.87	14.14
Bra005805.1-P	Field mustard	cytosol	8.96	14.12
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	6.44	13.97
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	11.74	13.94
Bra001147.1-P	Field mustard	cytosol	11.87	13.76
Bra005279.1-P	Field mustard	cytosol	5.56	13.41
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	9.97	11.84
Bra002170.1-P	Field mustard	mitochondrion	10.35	11.71
Bra005272.1-P	Field mustard	cytosol	6.82	9.38
Bra000617.1-P	Field mustard	endoplasmic reticulum	9.97	8.29
Bra000803.1-P	Field mustard	cytosol	9.09	7.29

Protein Annotations

Gene3D:2.100.10.30	Gene3D:2.120.10.80	MapMan:9.5.2.2	EnsemblPlantsGene:Bra018944	EnsemblPlants:Bra018944.1	EnsemblPlants:Bra018944.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0030246	InterPro:IPR001229	InterPro:IPR015915
InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
InterPro:Kelch_2	UniProt:M4DR01	PFAM:PF01344	PFAM:PF01419	PFAM:PF07646	PFscan:PS51752
PANTHER:PTHR23244	PANTHER:PTHR23244:SF208	SMART:SM00612	SMART:SM00915	SUPFAM:SSF117281	SUPFAM:SSF51101
UniParc:UPI000253E913	SEG:seg	:	:	:	:

Description

AT3G16410 (E=1e-176) NSP4 | NSP4 (NITRILE SPECIFIER PROTEIN 4)

Coordinates

chrA06:+:1073426..1077373

Molecular Weight (calculated)

86533.2 Da

IEP (calculated)

7.537

GRAVY (calculated)

-0.353

Length

792 amino acids

Sequence
(BLAST)

001: MATMSEKLEA AGGDKGNPFD DGIFDGVKRI IVGKSLLSVS YIKIEYDKDG DTESKEHGQF TRKHKEFALD YPDEYITAVG GTHQFDIKHK TTLIRSLFFK
101: TSRGRTSDTL GHKKNPMIPS LVSSAISSAV APVVSYETDF MFESKNGGKL LRFHGRAGPL LNAIGPHFFA FNYPLTHFNL EGGNEGNAWD DGAFDGVRKV
201: VVGRRGKFVS YVRFEYAKGE RTVPHSHGER DEAPKEFVVG YPHEHITLVE GTIDGKLTSL KFTTSKGRTS PAFGNEDGSK FAFEKTGFKL VGFCGRSSNV
301: INALGAHFAP FPAPVPAPAP VPAPAPAPAP ASSPNKREAL GGKGGETFDD GSFDNVRKIY VGQVDSNVAY LKFEYEKDGK REMREHGKKT GSGTEVFEVH
401: KDDYITSVKV YYGRHTGVIT SVTFKTFKGI TSPSFGKTSS NMFFLEGGKI TGFYGSSGDV IHSLGAYVSR STRMLRGKWI QVKQIGKDLE PGPRCSHAIA
501: MVGDKMYSFG GELTPNFSID KDMYVFDFNT RAWSIAPQNG DVPELACLGV CMVAIGTTLY VFGGRDSNRN YNGFYSYDTV KSEWKLITPV DKGPTPRSFF
601: SMAADDENVY VFGGVSKTVR LNSLHAYNIV DQKWTELPNP GESRVPRGGA GLAVVQGKIW VVYGFCGDEM DDVHCFDPVE SNWTKVETSG EKPWPRSVFA
701: LAVVGKYIII SGGEIEMAPQ AHLGPGKLDS GAFVLDTESL LWEKLEEGHS PRGWCASTTA SLDGKQGLLM YGGKAPTNGR FGDIFFYGVD SA

Best Arabidopsis Sequence Match ( AT3G16410.1 )
(BLAST)

001: MAQKVEAQGG NGGNQWDDGS EYDAVTKIQV AAGGNGIEYV KFTYVKNGQT EEAPLRGVKG RSFEADPFVI NHPEEHLVSV EGRYNPEGLI LGLTFKSNKK
101: TSDLIGYEDG TPFTLQVQDK KIVGFYGFAG NNLHSLGAYF APLTNVTPLN AKKLEAKGGD TGDIWDDGVY DNVRKVYVGQ AQYGIAFVKF EYVNGSQVVV
201: GDEHGKKTEL GVEEFEIDAD DYIVYVEGYR EKVNGMTSEM ITFLSFKTYK GKTSQPIEQR PGIKFVLQGG KIVGFHGRST DVLDSLGAYI SLSPTPNLHG
301: KWTKVDENGD GPGLRCSHDI AQVGNKIYSF GGEFTPNQPI DKHLYVFDIE SRTWSISPAT GDIPTLSCLG VCMVSIGSTL YVFGGRDASR QYNGFYSFDT
401: TTNEWKLLTP VEEGPTPRSF HSMAADEENV YVFGGVSATA RLNTLDSYNI VDKKWFHCST PGDSLTARGG AGLEVVQGKV WVVYGFNGCE VDDVHYYDPV
501: QDKWTQVETF GVRPSERSVF ASAALGKHIV IFGGEIAMDP LAHVGPGQLT DGTFALDTET LQWERLDKFG GEEETPSSRG WTASTTATIG GKKGLVMHGG
601: KAPTNDRFDD LFFYGIDSA

Arabidopsis Description

NSP4Nitrile-specifier protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O04316]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.