Factsheet for Zm00001d040606_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00630	Sorghum	cytosol	90.97	92.01
Zm00001d009123_P001	Maize	cytosol	86.77	86.08
Os01t0300900-01	Rice	cytosol	82.1	81.57
TraesCS3D01G195400.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	76.13	78.67
TraesCS3A01G192200.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	76.29	78.05
TraesCS3B01G221000.2	Wheat	cytosol, mitochondrion, nucleus, vacuole	76.13	78.02
HORVU3Hr1G040720.1	Barley	mitochondrion, nucleus, peroxisome, vacuole	75.48	75.61
GSMUA_Achr8P29940_001	Banana	cytosol	63.87	62.86
VIT_14s0060g01090.t01	Wine grape	nucleus	55.81	54.06
KRG90521	Soybean	peroxisome	53.23	52.3
KRH33805	Soybean	nucleus	53.06	52.14
PGSC0003DMT400007146	Potato	cytosol	51.29	48.62
KRH68432	Soybean	cytosol, nucleus, plastid	49.35	48.27
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	50.0	43.24
Solyc01g100600.2.1	Tomato	cytosol	33.23	41.28
Zm00001d037558_P001	Maize	cytosol	4.19	21.49
Zm00001d034759_P001	Maize	cytosol	17.26	21.4
Zm00001d019221_P001	Maize	cytosol	12.58	20.42
Zm00001d041692_P001	Maize	nucleus	15.97	18.23
Zm00001d034758_P003	Maize	plastid	19.03	17.33
Zm00001d046434_P003	Maize	plastid	15.97	16.26
Zm00001d031492_P001	Maize	cytosol	3.71	16.08
Zm00001d048718_P010	Maize	mitochondrion	17.42	15.54
Zm00001d012892_P002	Maize	plastid	19.19	15.2
Zm00001d051876_P002	Maize	nucleus	14.35	14.98
Zm00001d003259_P006	Maize	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	15.48	13.52
Zm00001d038406_P001	Maize	cytosol	4.68	13.3
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	15.97	12.94
Zm00001d021624_P002	Maize	mitochondrion	15.48	8.86

Protein Annotations

EMBL:BT063784	EnsemblPlants:Zm00001d040606_P001	EnsemblPlants:Zm00001d040606_T001	EnsemblPlantsGene:Zm00001d040606	Gene3D:2.120.10.80	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244
PANTHER:PTHR23244:SF417	PFAM:PF13415	PFAM:PF13418	ProteinID:ONM31637.1	ProteinID:ONM31638.1	SEG:seg
SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0001949006	UniProt:C0P665	MapMan:35.1	:

Description

Galactose oxidase/kelch repeat superfamily protein

Coordinates

chr3:+:53035908..53040506

Molecular Weight (calculated)

66746.0 Da

IEP (calculated)

8.380

GRAVY (calculated)

-0.429

Length

620 amino acids

Sequence
(BLAST)

001: MERRRKAMWL YPKVVGFNPP ERWGHSACFF EGFVYVFGGC CGGLHFGDVL KLNVETMAWS LVATTGQCPG TRDSHGAALV GHRMLVFGGT NGGRKVNDLH
101: VLDLRTGEWT RPQCKGAPPP SPRESHTVTV VGGDRLVVFG GSGEGEGNYL CDVHVLDVPT MTWSSPEVRG GHAPAPRDSH SAVAVGRRLF VFGGDCGDRY
201: HGDVDVLDVD TMAWSMFPVK GASPGVRAGH AAMSVGSKVY IIGGVGDKHY YSDVWVLDVT NRSWSQLEVC GQRPQGRFSH TAVAMNTDIA IYGGCGEDER
301: PLNELLILQL GSEHPNGRYN ISMCKVLSNH WSQEKRKFLR SEARDASVSN GEMAQKPREA ETEQRNPFLR GLENGRVKRR RTGEARPKEA ESEQEEHSLS
401: LSQHSSPSQS DQEQTGAHKL PASANTSPSA LQPFARLNGN GAQLRAAGPG GVSSRPLKAD QLLRTIAPQH RREVQFLSSD HQPQPRGPPG PPHLIGAEVH
501: GTVDGAFDSG YLVTAVVNGQ LFRGVLFAPG PGVTAPRPAV HHQILTSSAV PPQQRPLLAH AIPVHARPVP LPQATGFVLP DCAHHARQGF PAKAVKSEPE
601: RGSSDLHDVV LTLGGPGGGK

Best Arabidopsis Sequence Match ( AT1G18610.2 )
(BLAST)

001: MRWERVRQLQ QQVGLGESSS GPGKRWGHTC NAIKGGSFLY VFGGYGRDNC QTNQVHVFDA AKQIWTQPMI NGTPPPPRDS HSCTTVGDNL FVFGGTDGVN
101: PLKDLYILDT SSHTWKCPSV RGEGPEAREG HSATLVGKRL FVFGGCGKSS GINEEIYYND VYIFNTETFV WKRAVTIGNP PSARDSHSCS SWKNKLVVIG
201: GEDGHDYYLS DVHILDTDTL IWKELNTSGQ LLTPRAGHVT VSLGRNFFVF GGFTDAQNLY DDLYVLDVDT CIWSKVLTMG EGPSARFSSA GACLDPHKAG
301: FLVIVGGCNK NLEALDDMFY LQTGLGYDAR FDQNVGMLSL KKQLKIKCQE QSHASSLYDK SLVRINMDHQ GRGNFGLNTC QFNEGKMMFQ ARITESYPVG
401: YTMETMIDGK VLRGVLFSNK RSSILPADQS FSRKRPAMSN GDQDNRSKIS RTLIKDQANA VESKDSQLNG MEAGIDTISN PLGVNITTVA VAPHETETSV
501: VTSDAKNQDA SQLDMGTVNT VNTAPSSVPQ VDEASLESRN AITIDDRANK TGLGES

Arabidopsis Description

F25I16.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ82]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.