CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90521	Soybean	peroxisome	94.29	94.29
KRH68432	Soybean	cytosol, nucleus, plastid	70.36	70.03
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	71.0	62.48
VIT_14s0060g01090.t01	Wine grape	nucleus	61.81	60.94
GSMUA_Achr8P29940_001	Banana	cytosol	55.31	55.4
TraesCS3D01G195400.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	51.66	54.33
Os01t0300900-01	Rice	cytosol	53.25	53.85
TraesCS3A01G192200.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	51.51	53.63
TraesCS3B01G221000.2	Wheat	cytosol, mitochondrion, nucleus, vacuole	51.35	53.55
EES00630	Sorghum	cytosol	51.82	53.34
Zm00001d040606_P001	Maize	cytosol	52.14	53.06
HORVU3Hr1G040720.1	Barley	mitochondrion, nucleus, peroxisome, vacuole	50.71	51.7
Zm00001d009123_P001	Maize	cytosol	51.19	51.68
PGSC0003DMT400007146	Potato	cytosol	51.66	49.85
Solyc01g100600.2.1	Tomato	cytosol	33.28	42.08
KRH63188	Soybean	cytosol	22.35	23.0
KRH03160	Soybean	cytosol	22.5	22.68
KRH43755	Soybean	cytosol	11.73	22.56
KRH54725	Soybean	cytosol	21.87	22.51
KRH56785	Soybean	nucleus	22.19	22.22
KRG92046	Soybean	cytosol	16.64	21.08
KRG92113	Soybean	cytosol	11.89	20.44
KRH34674	Soybean	cytosol	15.85	19.84
KRG92111	Soybean	cytosol	4.12	18.98
KRG96823	Soybean	cytosol, plastid	18.7	18.18
KRH68531	Soybean	nucleus	18.7	17.93
KRG92884	Soybean	nucleus	18.23	17.45
KRH63715	Soybean	nucleus	17.59	16.82
KRH54239	Soybean	nucleus	16.96	16.21
KRH21038	Soybean	mitochondrion	18.23	16.2
KRH11220	Soybean	mitochondrion	18.23	16.02
KRH02216	Soybean	mitochondrion	17.27	15.4
KRH50909	Soybean	nucleus	17.59	15.27
KRH02069	Soybean	cytosol	10.94	11.2
KRH51088	Soybean	cytosol	18.7	10.98

Protein Annotations

EntrezGene:100801275	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02006558	EnsemblPlantsGene:GLYMA_10G146700	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR015915	UniProt:K7LJG5	EnsemblPlants:KRH33805	ProteinID:KRH33805
ProteinID:KRH33805.1	ProteinID:KRH33806.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF01344	PFAM:PF13415
PANTHER:PTHR23244	PANTHER:PTHR23244:SF401	InterPro:Quinoprotein_ADH-like_supfam	SUPFAM:SSF117281	SUPFAM:SSF50998	UniParc:UPI0002963EBA
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:38159959..38165201

Molecular Weight (calculated)

69174.9 Da

IEP (calculated)

7.249

GRAVY (calculated)

-0.432

Length

631 amino acids

Sequence
(BLAST)

001: MGSLVAETAM KKPMWLYPKV LGFNPSERWG HSACFSGGLM YVFGGCCGGL HFGDVLCLDL EKMDWSKLAT TGEKPGPRDS HSAVLVGHKM IVFGGTNGLK
101: KVNDTHILDL VTKEWFRPKC EGTPPSPRES HTATLVGDER LVIFGGSGEG EANYLNDLHV LDLRTMRWTS PTVKGDFPVP RDSHSTLAIG NKLIMYGGDC
201: GDQYQGDVNV LDMDTMSWSR LRIQGSSPGV RAGHAAVNIG TKIYIIGGVG DKRYYNDIWV FDICTCSWTQ LDIRGQQPQG RFSHTAVVAD MDIAIYGGCG
301: EDERPLNELL VLQLGAEHPN GRYNISMCKV FGTCWNHEKR TIPGGADTNS TTPRNGNNNM EVLGKWAYEV VSDKVNPCHF DSGTSQQKRR RIAIAKVWDV
401: ESEQEEHSLS LSQHSSPSQS DQEQTPGQKS NVSVMDAQSY HWFKQINKSP SYCQLDNIPS NNTALKNITQ RSVHLIENQP KQEHYLHVDE DRKGARHTQH
501: LIGAEVRGKV DGAFDSGLLM TAAVNGRVFR GVLFAPGAGV FSTSVEPKCS VSCSFPSTQP FMNSNHHVRD SQQVANCSRA EPCHGISQPV LAQPTPIMRG
601: TTVSLAKEHK VRSDLQGLVL TLGGPASGNH A

Best Arabidopsis Sequence Match ( AT1G18610.1 )
(BLAST)

001: MRWERVRQLQ QQVGLGESSS GPGKRWGHTC NAIKGGSFLY VFGGYGRDNC QTNQVHVFDA AKQIWTQPMI NGTPPPPRDS HSCTTVGDNL FVFGGTDGVN
101: PLKDLYILDT SSHTWKCPSV RGEGPEAREG HSATLVGKRL FVFGGCGKSS GINEEIYYND VYIFNTETFV WKRAVTIGNP PSARDSHSCS SWKNKLVVIG
201: GEDGHDYYLS DVHILDTDTL IWKELNTSGQ LLTPRAGHVT VSLGRNFFVF GGFTDAQNLY DDLYVLDVDT CIWSKVLTMG EGPSARFSSA GACLDPHKAG
301: FLVIVGGCNK NLEALDDMFY LQTGLGYDAR FDQNVGMLSL KKQLKIKCQE QSHASSLYDK SLVRINMDHQ GRGNFGLNTC QFNEGKMMFQ ARITESYPVG
401: YTMETMIDGK VLRGVLFSNK RSSILPADQS FSRKRPAMSN GDQDNRSKIS RTLIKDQANA VESKDSQLNG MEAGIDTISN PLGVNITTVA VAPHETETSV
501: VTSDAKNQDA SQLDMGTVNT VNTAPSSVPQ VDEASLESRN AITIDDRANK TGLGES

Arabidopsis Description

F25I16.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ82]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.