Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51088 | Soybean | cytosol | 84.9 | 48.65 |
| PGSC0003DMT400060067 | Potato | cytosol | 53.9 | 44.44 |
| VIT_10s0116g01770.t01 | Wine grape | cytosol | 59.58 | 35.22 |
| Solyc05g055610.2.1 | Tomato | cytosol | 52.76 | 32.7 |
| Bra000803.1-P | Field mustard | cytosol | 51.62 | 32.22 |
| AT4G04670.1 | Thale cress | cytosol | 51.46 | 31.86 |
| CDY21313 | Canola | cytosol | 50.81 | 31.55 |
| CDX90875 | Canola | cytosol | 51.46 | 31.42 |
| GSMUA_Achr6P29460_001 | Banana | cytosol | 48.7 | 28.12 |
| TraesCS2D01G229200.1 | Wheat | cytosol | 45.45 | 25.76 |
| TraesCS2B01G248800.1 | Wheat | cytosol | 45.29 | 25.67 |
| TraesCS2A01G223200.1 | Wheat | cytosol | 45.29 | 25.67 |
| KXG36320 | Sorghum | cytosol, nucleus, peroxisome | 44.64 | 25.44 |
| HORVU2Hr1G046680.19 | Barley | cytosol | 45.13 | 25.43 |
| Zm00001d021624_P002 | Maize | mitochondrion | 44.32 | 25.18 |
| KRG92113 | Soybean | cytosol | 10.23 | 17.17 |
| KRH34674 | Soybean | cytosol | 10.23 | 12.5 |
| KRH43755 | Soybean | cytosol | 6.01 | 11.28 |
| KRG90521 | Soybean | peroxisome | 11.2 | 10.94 |
| KRH33805 | Soybean | nucleus | 11.2 | 10.94 |
| KRH68432 | Soybean | cytosol, nucleus, plastid | 10.71 | 10.41 |
| KRG92884 | Soybean | nucleus | 11.04 | 10.32 |
| KRH21038 | Soybean | mitochondrion | 11.69 | 10.14 |
| KRH63188 | Soybean | cytosol | 10.06 | 10.11 |
| KRG92046 | Soybean | cytosol | 8.12 | 10.04 |
| KRH68531 | Soybean | nucleus | 10.71 | 10.03 |
| KRH11220 | Soybean | mitochondrion | 11.69 | 10.03 |
| KRG96823 | Soybean | cytosol, plastid | 10.55 | 10.02 |
| KRH54725 | Soybean | cytosol | 9.9 | 9.95 |
| KRH02216 | Soybean | mitochondrion | 11.36 | 9.89 |
| KRH56785 | Soybean | nucleus | 10.06 | 9.84 |
| KRH03160 | Soybean | cytosol | 9.74 | 9.58 |
| KRH63715 | Soybean | nucleus | 10.06 | 9.39 |
| KRH50909 | Soybean | nucleus | 11.04 | 9.35 |
| KRH54239 | Soybean | nucleus | 9.9 | 9.24 |
| KRG96716 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 10.71 | 9.21 |
| KRG92111 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.120.10.80 | Gene3D:3.40.50.150 | MapMan:35.1 | UniProt:A0A0R0FI96 | EMBL:ACUP02010293 | EnsemblPlantsGene:GLYMA_17G013500 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0016740 | InterPro:IPR015915 |
| InterPro:IPR030382 | EnsemblPlants:KRH02069 | ProteinID:KRH02069 | ProteinID:KRH02069.1 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 |
| InterPro:MeTrfase_TRM5/TYW2 | PFAM:PF01344 | PFAM:PF02475 | PANTHER:PTHR23245 | PANTHER:PTHR23245:SF25 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF117281 | SUPFAM:SSF53335 | UniParc:UPI0006ED95E7 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr17:+:1026748..1031482
Molecular Weight (calculated)
69505.1 Da
IEP (calculated)
6.907
GRAVY (calculated)
-0.267
Length
616 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNIYVFGG LDNDIIFSSF RVFDTNNLHW KEIPVSGDWP CARHSHAMVA SGCQIFMFGG YNGGKALGNL YSFDVQKGQW MKERTDGWNP HARFSHSIFV
101: YKNYLGVLGG CPVRQHCQEL ALLDLKLHLW KHVTLNSVGK DSFVCSTANV MGDDVVVVGS GASCYAFGTK FSEPAKLSLL HLMHSHDEPV KNQRKHIINQ
201: NEGTNRNNIE NSFGPQLEHA PNLSEDESSH FNGNIPCLND QSQMIVLHYV LQLEKKYAKL GKDILKKFGW LDLGMKAYSD KGGIHICFPV HQEFFAVFHE
301: RNHHMGDAFD GKNEGPFSKP IKRDEFLLNE LSCSEVLILL HEYGAIVLGD KVVEERKAAK SPLKVMTEAI TSLIEHKGLP VQLLEELPRR WDLLGDIVLL
401: PSTSFKDSMW DSIAEELWSI VAKSLKAHRL ARQGPVAATG TRDSTLQILV GNNGWFNHQE NGILYSFDAT KCMFSWEALQ HNLQTNFVAD RCIILEVDNR
501: ITAPKSVADR VCLGLIPSRE GGILHVHGNT KDSDESQWTD HVSKSIHDIA RSEGYCWEVS IEHVERVKWY APHIRHVGSR CKMQTDPKIV NGLVFEIENW
601: LMHTINVSII KNINMP
101: YKNYLGVLGG CPVRQHCQEL ALLDLKLHLW KHVTLNSVGK DSFVCSTANV MGDDVVVVGS GASCYAFGTK FSEPAKLSLL HLMHSHDEPV KNQRKHIINQ
201: NEGTNRNNIE NSFGPQLEHA PNLSEDESSH FNGNIPCLND QSQMIVLHYV LQLEKKYAKL GKDILKKFGW LDLGMKAYSD KGGIHICFPV HQEFFAVFHE
301: RNHHMGDAFD GKNEGPFSKP IKRDEFLLNE LSCSEVLILL HEYGAIVLGD KVVEERKAAK SPLKVMTEAI TSLIEHKGLP VQLLEELPRR WDLLGDIVLL
401: PSTSFKDSMW DSIAEELWSI VAKSLKAHRL ARQGPVAATG TRDSTLQILV GNNGWFNHQE NGILYSFDAT KCMFSWEALQ HNLQTNFVAD RCIILEVDNR
501: ITAPKSVADR VCLGLIPSRE GGILHVHGNT KDSDESQWTD HVSKSIHDIA RSEGYCWEVS IEHVERVKWY APHIRHVGSR CKMQTDPKIV NGLVFEIENW
601: LMHTINVSII KNINMP
001: MDFEKRKAAT LASIRSSVTD KSPKGFLDEP IIPLLETINH HPSYFTTSSC SGRISILSQP KPKSNDSTKK KARGGSWLYI THDPADSDLV ISLLFPSKSN
101: QIDPIDQPSE LVFRFEPLII AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP EYVKFLVDIA NEKMDANRKR
201: TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN GNLYPGVQKE LIPLEKLSIV GEPVEKLHLW GHSACTIDES DRKEVIVFGG FGGFGRHARR
301: NESLLLNPSC GTLKLIAVNE SPSARLGHTA SMVGDFMFVI GGRADPLNIL NDVWRLDIST GEWSSQRCVG SEFPPRHRHA AASVGTKVYI FGGLYNDKIV
401: SSMHILDTKD LQWKEVEQQG QWPCARHSHA MVAYGSQSFM FGGYNGENVL NDLYSFDVQS CSWKLEVISG KWPHARFSHS MFVYKHTIGI IGGCPVSQNC
501: QELTLLDLKH RLWRSVRLEF MNKELFVRST ASILGDDLIV IGGGAACYAF GTKFSEPVKI NLVQSVTMSE NHLPPQPEDV SLESNKNNAD LKTETSLSQP
601: WVIQLERKYA KFGKDILKSF GWLDLERKVY SNEKGLCICF PVTENFSELF HEKQLLGKDF ERSEENNLTK GLSLKDISCS AALNLLKEHG AKKLINVAFE
701: AKKVAKSPLQ RMREDITSIL KQKGLPEELL DELPQKWERL GDIVVVPATS FKDPTWSSIN DEVWCAVSKS LSANRLARQG RVEPNGTRDS TLEILVGDNG
801: WVNHRENGIL YSFDATKCMF SWGNLSEKLR MGNMACENEV VVDLFAGIGY FVLPFLVRAK AKLVYACEWN PHAIEALRRN VEANSVSERC IILEGDNRIT
901: APKGVADRVN LGLIPSSEGS WVTAIQALRP EGGILHVHGN VKDSDESSWG EHVTKTLSDI ARAEGRSWEV TVEHIEKVKW YAPRIRHLVA DVRCR
101: QIDPIDQPSE LVFRFEPLII AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP EYVKFLVDIA NEKMDANRKR
201: TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN GNLYPGVQKE LIPLEKLSIV GEPVEKLHLW GHSACTIDES DRKEVIVFGG FGGFGRHARR
301: NESLLLNPSC GTLKLIAVNE SPSARLGHTA SMVGDFMFVI GGRADPLNIL NDVWRLDIST GEWSSQRCVG SEFPPRHRHA AASVGTKVYI FGGLYNDKIV
401: SSMHILDTKD LQWKEVEQQG QWPCARHSHA MVAYGSQSFM FGGYNGENVL NDLYSFDVQS CSWKLEVISG KWPHARFSHS MFVYKHTIGI IGGCPVSQNC
501: QELTLLDLKH RLWRSVRLEF MNKELFVRST ASILGDDLIV IGGGAACYAF GTKFSEPVKI NLVQSVTMSE NHLPPQPEDV SLESNKNNAD LKTETSLSQP
601: WVIQLERKYA KFGKDILKSF GWLDLERKVY SNEKGLCICF PVTENFSELF HEKQLLGKDF ERSEENNLTK GLSLKDISCS AALNLLKEHG AKKLINVAFE
701: AKKVAKSPLQ RMREDITSIL KQKGLPEELL DELPQKWERL GDIVVVPATS FKDPTWSSIN DEVWCAVSKS LSANRLARQG RVEPNGTRDS TLEILVGDNG
801: WVNHRENGIL YSFDATKCMF SWGNLSEKLR MGNMACENEV VVDLFAGIGY FVLPFLVRAK AKLVYACEWN PHAIEALRRN VEANSVSERC IILEGDNRIT
901: APKGVADRVN LGLIPSSEGS WVTAIQALRP EGGILHVHGN VKDSDESSWG EHVTKTLSDI ARAEGRSWEV TVEHIEKVKW YAPRIRHLVA DVRCR
Arabidopsis Description
tRNA wybutosine-synthesizing protein 2/3/4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4K1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.