Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G248800.1 | Wheat | cytosol | 98.25 | 98.25 |
| TraesCS2D01G229200.1 | Wheat | cytosol | 97.88 | 97.88 |
| HORVU2Hr1G046680.19 | Barley | cytosol | 94.85 | 94.33 |
| KXG36320 | Sorghum | cytosol, nucleus, peroxisome | 72.95 | 73.36 |
| Zm00001d021624_P002 | Maize | mitochondrion | 70.93 | 71.13 |
| GSMUA_Achr6P29460_001 | Banana | cytosol | 56.49 | 57.54 |
| AT4G04670.1 | Thale cress | cytosol | 49.77 | 54.37 |
| VIT_10s0116g01770.t01 | Wine grape | cytosol | 51.79 | 54.03 |
| Bra000803.1-P | Field mustard | cytosol | 48.57 | 53.5 |
| Solyc05g055610.2.1 | Tomato | cytosol | 48.85 | 53.42 |
| PGSC0003DMT400060067 | Potato | cytosol | 36.15 | 52.61 |
| CDX90875 | Canola | cytosol | 48.57 | 52.33 |
| CDY21313 | Canola | cytosol | 47.75 | 52.32 |
| KRH51088 | Soybean | cytosol | 50.97 | 51.53 |
| KRH02069 | Soybean | cytosol | 25.67 | 45.29 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 5.8 | 19.27 |
| TraesCS4A01G356300.1 | Wheat | mitochondrion | 8.56 | 18.49 |
| TraesCS4A01G356400.2 | Wheat | plastid | 11.13 | 18.09 |
| TraesCS5A01G094000.1 | Wheat | cytosol | 8.74 | 18.03 |
| TraesCS3A01G192200.1 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 9.11 | 16.34 |
| TraesCS6A01G406400.1 | Wheat | cytosol | 8.65 | 16.32 |
| TraesCS5A01G094400.1 | Wheat | mitochondrion | 9.84 | 15.57 |
| TraesCS4A01G167800.1 | Wheat | mitochondrion | 9.66 | 15.35 |
| TraesCS2A01G321200.1 | Wheat | nucleus | 8.92 | 14.67 |
Protein Annotations
| Gene3D:2.120.10.80 | Gene3D:3.30.1960.10 | Gene3D:3.40.50.150 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015915 | InterPro:IPR030382 | InterPro:IPR036602 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 |
| InterPro:MeTrfase_TRM5/TYW2 | PFAM:PF01344 | PFAM:PF02475 | PFAM:PF02676 | PFscan:PS51684 | PANTHER:PTHR23245 |
| PANTHER:PTHR23245:SF25 | InterPro:SAM-dependent_MTases | SUPFAM:SSF111278 | SUPFAM:SSF117281 | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS2A01G223200 |
| EnsemblPlants:TraesCS2A01G223200.1 | TIGR:cd02440 | SEG:seg | InterPro:tRNA_yW-synthesising | InterPro:tRNA_yW-synthesising-like_sf | : |
Description
No Description!
Coordinates
chr2A:-:216526321..216539598
Molecular Weight (calculated)
119169.0 Da
IEP (calculated)
7.548
GRAVY (calculated)
-0.181
Length
1087 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDFARRKAAA LAALSSPAPD KSPKGGVDAP IAPLLDALNS HADLFTTSSC SGRISVLAQP SPQSQAADPK PKKKARGGGW LYISHDPADP DAVVELLFGG
0101: TGCGERGGGD ELVFRFEPMI VAVECRDAAA AAALVAAAIG AGFRESGITS LQRRAMVAIR CSIRMEVPLG LTNELVVSPE YIRYLVRIAN CKMEANKKRM
0201: DGFLDVLQSK GLPGISRLQV HTKKDDRSLG SEVQASLNQS VQTHDELLVT EKRRGSYNCD AGTKGDCEIG ENSIEGSYYE NRDAVRNNIA KHGFGNAERL
0301: MHEGRLSASS GNRSSHLSIT ELKISGEPVE KLFLWGQSAC AFTVGGEQQV LTFGGFGGPG RHSRRNYSLL LDPTSGLLKE INVKGSPSPR MGHTTTAVGN
0401: HIYAVGGRAG PSEILDDVWV LQSTENRWSR VECSGDIFHP RHRHAAAAAA LKIYVFGGLS NEGIYSCLNI LDTESMRWNV ISAAGEWPCA RHSHSLVSYG
0501: STLFMFGGHD GQRALNDFYS FDTTTLSWNK EITSGRTPSP RFSHCMFIYK HYIGILGGCP IRENNQEIAL LHLKHRVWFH VSIPALGQCL CVRSSSVVTD
0601: DDLVVIGGGA SCYAFGTKFC QPVKIDLHLL ESVFELAYKK NDNAVQSWDA TYTMDLQERE QNGTFISHNV KSMVDAATNG IAGSDPLVFQ LEKKYAKLAK
0701: DILKKFGWLD LARKVQVSQD NVLVLFPVSR NFHTLLTDQH SKLLDDDSCI SKGLLGCPEK KLIGASIALH EALEILSSFH GSFLKDELAL SRKAYKSPQI
0801: IMRELISSLL ERKGMPSRLL EQLPTRWETL GDITVLPKTC FKDLLWESVR EELWQLVAKS LGAQRLARQG KIMPNGTRDS TLELLVGDNG WVTHNENGIS
0901: YSLDATKCMF SSGNRSEKLR MGQLDCRDEV VVDLFSGIGY FVLPFLVKAN AKLVYACEWN PHALEALQRN VMDNHVADRC VILEGDNRLI APKGVADRVC
1001: LGLIPCSECS WATAVRALRV GGGVLHIHGN VNDSDEARWL DNVVESISSI ATAHGLSWKV SLEHVERVKW YGPHIRHVVA DVRCGSN
0101: TGCGERGGGD ELVFRFEPMI VAVECRDAAA AAALVAAAIG AGFRESGITS LQRRAMVAIR CSIRMEVPLG LTNELVVSPE YIRYLVRIAN CKMEANKKRM
0201: DGFLDVLQSK GLPGISRLQV HTKKDDRSLG SEVQASLNQS VQTHDELLVT EKRRGSYNCD AGTKGDCEIG ENSIEGSYYE NRDAVRNNIA KHGFGNAERL
0301: MHEGRLSASS GNRSSHLSIT ELKISGEPVE KLFLWGQSAC AFTVGGEQQV LTFGGFGGPG RHSRRNYSLL LDPTSGLLKE INVKGSPSPR MGHTTTAVGN
0401: HIYAVGGRAG PSEILDDVWV LQSTENRWSR VECSGDIFHP RHRHAAAAAA LKIYVFGGLS NEGIYSCLNI LDTESMRWNV ISAAGEWPCA RHSHSLVSYG
0501: STLFMFGGHD GQRALNDFYS FDTTTLSWNK EITSGRTPSP RFSHCMFIYK HYIGILGGCP IRENNQEIAL LHLKHRVWFH VSIPALGQCL CVRSSSVVTD
0601: DDLVVIGGGA SCYAFGTKFC QPVKIDLHLL ESVFELAYKK NDNAVQSWDA TYTMDLQERE QNGTFISHNV KSMVDAATNG IAGSDPLVFQ LEKKYAKLAK
0701: DILKKFGWLD LARKVQVSQD NVLVLFPVSR NFHTLLTDQH SKLLDDDSCI SKGLLGCPEK KLIGASIALH EALEILSSFH GSFLKDELAL SRKAYKSPQI
0801: IMRELISSLL ERKGMPSRLL EQLPTRWETL GDITVLPKTC FKDLLWESVR EELWQLVAKS LGAQRLARQG KIMPNGTRDS TLELLVGDNG WVTHNENGIS
0901: YSLDATKCMF SSGNRSEKLR MGQLDCRDEV VVDLFSGIGY FVLPFLVKAN AKLVYACEWN PHALEALQRN VMDNHVADRC VILEGDNRLI APKGVADRVC
1001: LGLIPCSECS WATAVRALRV GGGVLHIHGN VNDSDEARWL DNVVESISSI ATAHGLSWKV SLEHVERVKW YGPHIRHVVA DVRCGSN
001: MDFEKRKAAT LASIRSSVTD KSPKGFLDEP IIPLLETINH HPSYFTTSSC SGRISILSQP KPKSNDSTKK KARGGSWLYI THDPADSDLV ISLLFPSKSN
101: QIDPIDQPSE LVFRFEPLII AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP EYVKFLVDIA NEKMDANRKR
201: TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN GNLYPGVQKE LIPLEKLSIV GEPVEKLHLW GHSACTIDES DRKEVIVFGG FGGFGRHARR
301: NESLLLNPSC GTLKLIAVNE SPSARLGHTA SMVGDFMFVI GGRADPLNIL NDVWRLDIST GEWSSQRCVG SEFPPRHRHA AASVGTKVYI FGGLYNDKIV
401: SSMHILDTKD LQWKEVEQQG QWPCARHSHA MVAYGSQSFM FGGYNGENVL NDLYSFDVQS CSWKLEVISG KWPHARFSHS MFVYKHTIGI IGGCPVSQNC
501: QELTLLDLKH RLWRSVRLEF MNKELFVRST ASILGDDLIV IGGGAACYAF GTKFSEPVKI NLVQSVTMSE NHLPPQPEDV SLESNKNNAD LKTETSLSQP
601: WVIQLERKYA KFGKDILKSF GWLDLERKVY SNEKGLCICF PVTENFSELF HEKQLLGKDF ERSEENNLTK GLSLKDISCS AALNLLKEHG AKKLINVAFE
701: AKKVAKSPLQ RMREDITSIL KQKGLPEELL DELPQKWERL GDIVVVPATS FKDPTWSSIN DEVWCAVSKS LSANRLARQG RVEPNGTRDS TLEILVGDNG
801: WVNHRENGIL YSFDATKCMF SWGNLSEKLR MGNMACENEV VVDLFAGIGY FVLPFLVRAK AKLVYACEWN PHAIEALRRN VEANSVSERC IILEGDNRIT
901: APKGVADRVN LGLIPSSEGS WVTAIQALRP EGGILHVHGN VKDSDESSWG EHVTKTLSDI ARAEGRSWEV TVEHIEKVKW YAPRIRHLVA DVRCR
101: QIDPIDQPSE LVFRFEPLII AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP EYVKFLVDIA NEKMDANRKR
201: TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN GNLYPGVQKE LIPLEKLSIV GEPVEKLHLW GHSACTIDES DRKEVIVFGG FGGFGRHARR
301: NESLLLNPSC GTLKLIAVNE SPSARLGHTA SMVGDFMFVI GGRADPLNIL NDVWRLDIST GEWSSQRCVG SEFPPRHRHA AASVGTKVYI FGGLYNDKIV
401: SSMHILDTKD LQWKEVEQQG QWPCARHSHA MVAYGSQSFM FGGYNGENVL NDLYSFDVQS CSWKLEVISG KWPHARFSHS MFVYKHTIGI IGGCPVSQNC
501: QELTLLDLKH RLWRSVRLEF MNKELFVRST ASILGDDLIV IGGGAACYAF GTKFSEPVKI NLVQSVTMSE NHLPPQPEDV SLESNKNNAD LKTETSLSQP
601: WVIQLERKYA KFGKDILKSF GWLDLERKVY SNEKGLCICF PVTENFSELF HEKQLLGKDF ERSEENNLTK GLSLKDISCS AALNLLKEHG AKKLINVAFE
701: AKKVAKSPLQ RMREDITSIL KQKGLPEELL DELPQKWERL GDIVVVPATS FKDPTWSSIN DEVWCAVSKS LSANRLARQG RVEPNGTRDS TLEILVGDNG
801: WVNHRENGIL YSFDATKCMF SWGNLSEKLR MGNMACENEV VVDLFAGIGY FVLPFLVRAK AKLVYACEWN PHAIEALRRN VEANSVSERC IILEGDNRIT
901: APKGVADRVN LGLIPSSEGS WVTAIQALRP EGGILHVHGN VKDSDESSWG EHVTKTLSDI ARAEGRSWEV TVEHIEKVKW YAPRIRHLVA DVRCR
Arabidopsis Description
tRNA wybutosine-synthesizing protein 2/3/4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4K1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.