Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400060067 | Potato | cytosol | 67.61 | 89.96 |
| VIT_10s0116g01770.t01 | Wine grape | cytosol | 62.58 | 59.69 |
| AT4G04670.1 | Thale cress | cytosol | 58.55 | 58.49 |
| Bra000803.1-P | Field mustard | cytosol | 57.75 | 58.16 |
| CDY21313 | Canola | cytosol | 57.04 | 57.16 |
| CDX90875 | Canola | cytosol | 57.95 | 57.09 |
| KRH51088 | Soybean | cytosol | 61.57 | 56.93 |
| KRH02069 | Soybean | cytosol | 32.7 | 52.76 |
| GSMUA_Achr6P29460_001 | Banana | cytosol | 55.23 | 51.45 |
| KXG36320 | Sorghum | cytosol, nucleus, peroxisome | 53.92 | 49.58 |
| TraesCS2D01G229200.1 | Wheat | cytosol | 53.52 | 48.94 |
| TraesCS2A01G223200.1 | Wheat | cytosol | 53.42 | 48.85 |
| TraesCS2B01G248800.1 | Wheat | cytosol | 53.32 | 48.76 |
| Zm00001d021624_P002 | Maize | mitochondrion | 52.62 | 48.25 |
| HORVU2Hr1G046680.19 | Barley | cytosol | 52.82 | 48.03 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 7.24 | 22.09 |
| Solyc11g007320.1.1 | Tomato | cytosol | 9.05 | 17.96 |
| Solyc03g114960.2.1 | Tomato | nucleus | 9.76 | 17.9 |
| Solyc01g099350.2.1 | Tomato | extracellular | 11.97 | 17.79 |
| Solyc11g007960.1.1 | Tomato | cytosol | 8.45 | 17.07 |
| Solyc01g067480.2.1 | Tomato | mitochondrion | 10.06 | 15.22 |
| Solyc03g111390.2.1 | Tomato | nucleus | 9.96 | 14.64 |
| Solyc01g100600.2.1 | Tomato | cytosol | 5.73 | 11.42 |
Protein Annotations
| Gene3D:2.120.10.80 | Gene3D:3.30.1960.10 | Gene3D:3.40.50.150 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008033 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016740 | InterPro:IPR015915 | InterPro:IPR030382 | InterPro:IPR036602 | UniProt:K4C2N7 |
| InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | InterPro:MeTrfase_TRM5/TYW2 | PFAM:PF01344 | PFAM:PF02475 | PFAM:PF02676 |
| PFAM:PF13964 | PFscan:PS51684 | PANTHER:PTHR23245 | PANTHER:PTHR23245:SF25 | InterPro:SAM-dependent_MTases | SMART:SM00612 |
| SUPFAM:SSF111278 | SUPFAM:SSF117281 | SUPFAM:SSF53335 | EnsemblPlantsGene:Solyc05g055610.2 | EnsemblPlants:Solyc05g055610.2.1 | UniParc:UPI0002767249 |
| SEG:seg | InterPro:tRNA_yW-synthesising | InterPro:tRNA_yW-synthesising-like_sf | : | : | : |
Description
No Description!
Coordinates
chr5:-:65172384..65179015
Molecular Weight (calculated)
110277.0 Da
IEP (calculated)
7.099
GRAVY (calculated)
-0.115
Length
994 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFEKRKLAA LSSMNSPEPD KSPKGNIDAP IIPLLNTLNS HPSYFTTSSC SGRISILSQP ITPITNPTKK KAKGGKWVFI SHDPIEPHLI LSHLFPSKSI
101: QPVKSVTDVA DLHSLVFRFE PLIIAVECKD IEAAQFLVSL AISSGFRESG ITSVNRRVII AIRCSIRLEV PLGDTEKIMV SSEYVKYLVE LANEKMEVNR
201: KRTDNFLDIL LKNGFLGSQI SNGEVDCDDS DLLENSLVNG VNGNGNAKRR DFDDSCSGSE VAPDINLHTV KLVISGESIE RLFLWGHSSS TMDDVDKKKV
301: LIFGGFGGMG RHARRRDLLL LDLECGRMEV IDVLDAPCPR VGHTSSMIGD AMYVIGGRAD PSNILNDVWV FNVTKKNWRL LECSGTPFLP RHRHAAAAVG
401: SRIYVFGGIH NDMIFSSLYV FDTQNIEWSE IQVQGDLPCA RHSHSMAAYG TQIFVFGGYD GQKALGDLYS FDVKTCVWKK ENMIGRPPSA KFSHSMFIYK
501: KYLGIIGGCP VSQHNQRLSL LNLESHGWKH ISISSIGEGL FVRCTANIVD TDLIMIGGGA ACYAFGTKFS APNAVEAVTN GSFHQNSEGI DSGIARSQMV
601: ASHWVLRLKK KDAKMAKDML KKLGWLDLGR KAHSQEDGKD ICFPVTENFR ALFNQRNNLE GVSESVCQSE KDTCMIALNI LIECGATILA DEIVKVKKAS
701: HSPFKVMKEA VGSLLSDRGL PLQLLEELPS RWERLGDIVV LPLTSFKDSA WDLIGQELWF IVAKSLGAIR LARQGRVAPT GTRDSTLEIL VGDNGWVNHR
801: ENGILYSFDA TKCMFSWGNL SEKLRMGHFD CKDEVIVDLF AGIGYFVLPF LVRAKARLVY ACEWNPHAVE ALRHNLEANL VADRCVLLEG DNRITAPKGV
901: ADRVCLGLIP TSEGSWLTAV RALRDEGGIL HIHGNVKDSE EHIWTNHVSQ SIQEIARSEG HDWDVTVEHV ERVKWYAPHI RHLVADVRCK MIQT
101: QPVKSVTDVA DLHSLVFRFE PLIIAVECKD IEAAQFLVSL AISSGFRESG ITSVNRRVII AIRCSIRLEV PLGDTEKIMV SSEYVKYLVE LANEKMEVNR
201: KRTDNFLDIL LKNGFLGSQI SNGEVDCDDS DLLENSLVNG VNGNGNAKRR DFDDSCSGSE VAPDINLHTV KLVISGESIE RLFLWGHSSS TMDDVDKKKV
301: LIFGGFGGMG RHARRRDLLL LDLECGRMEV IDVLDAPCPR VGHTSSMIGD AMYVIGGRAD PSNILNDVWV FNVTKKNWRL LECSGTPFLP RHRHAAAAVG
401: SRIYVFGGIH NDMIFSSLYV FDTQNIEWSE IQVQGDLPCA RHSHSMAAYG TQIFVFGGYD GQKALGDLYS FDVKTCVWKK ENMIGRPPSA KFSHSMFIYK
501: KYLGIIGGCP VSQHNQRLSL LNLESHGWKH ISISSIGEGL FVRCTANIVD TDLIMIGGGA ACYAFGTKFS APNAVEAVTN GSFHQNSEGI DSGIARSQMV
601: ASHWVLRLKK KDAKMAKDML KKLGWLDLGR KAHSQEDGKD ICFPVTENFR ALFNQRNNLE GVSESVCQSE KDTCMIALNI LIECGATILA DEIVKVKKAS
701: HSPFKVMKEA VGSLLSDRGL PLQLLEELPS RWERLGDIVV LPLTSFKDSA WDLIGQELWF IVAKSLGAIR LARQGRVAPT GTRDSTLEIL VGDNGWVNHR
801: ENGILYSFDA TKCMFSWGNL SEKLRMGHFD CKDEVIVDLF AGIGYFVLPF LVRAKARLVY ACEWNPHAVE ALRHNLEANL VADRCVLLEG DNRITAPKGV
901: ADRVCLGLIP TSEGSWLTAV RALRDEGGIL HIHGNVKDSE EHIWTNHVSQ SIQEIARSEG HDWDVTVEHV ERVKWYAPHI RHLVADVRCK MIQT
001: MDFEKRKAAT LASIRSSVTD KSPKGFLDEP IIPLLETINH HPSYFTTSSC SGRISILSQP KPKSNDSTKK KARGGSWLYI THDPADSDLV ISLLFPSKSN
101: QIDPIDQPSE LVFRFEPLII AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP EYVKFLVDIA NEKMDANRKR
201: TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN GNLYPGVQKE LIPLEKLSIV GEPVEKLHLW GHSACTIDES DRKEVIVFGG FGGFGRHARR
301: NESLLLNPSC GTLKLIAVNE SPSARLGHTA SMVGDFMFVI GGRADPLNIL NDVWRLDIST GEWSSQRCVG SEFPPRHRHA AASVGTKVYI FGGLYNDKIV
401: SSMHILDTKD LQWKEVEQQG QWPCARHSHA MVAYGSQSFM FGGYNGENVL NDLYSFDVQS CSWKLEVISG KWPHARFSHS MFVYKHTIGI IGGCPVSQNC
501: QELTLLDLKH RLWRSVRLEF MNKELFVRST ASILGDDLIV IGGGAACYAF GTKFSEPVKI NLVQSVTMSE NHLPPQPEDV SLESNKNNAD LKTETSLSQP
601: WVIQLERKYA KFGKDILKSF GWLDLERKVY SNEKGLCICF PVTENFSELF HEKQLLGKDF ERSEENNLTK GLSLKDISCS AALNLLKEHG AKKLINVAFE
701: AKKVAKSPLQ RMREDITSIL KQKGLPEELL DELPQKWERL GDIVVVPATS FKDPTWSSIN DEVWCAVSKS LSANRLARQG RVEPNGTRDS TLEILVGDNG
801: WVNHRENGIL YSFDATKCMF SWGNLSEKLR MGNMACENEV VVDLFAGIGY FVLPFLVRAK AKLVYACEWN PHAIEALRRN VEANSVSERC IILEGDNRIT
901: APKGVADRVN LGLIPSSEGS WVTAIQALRP EGGILHVHGN VKDSDESSWG EHVTKTLSDI ARAEGRSWEV TVEHIEKVKW YAPRIRHLVA DVRCR
101: QIDPIDQPSE LVFRFEPLII AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP EYVKFLVDIA NEKMDANRKR
201: TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN GNLYPGVQKE LIPLEKLSIV GEPVEKLHLW GHSACTIDES DRKEVIVFGG FGGFGRHARR
301: NESLLLNPSC GTLKLIAVNE SPSARLGHTA SMVGDFMFVI GGRADPLNIL NDVWRLDIST GEWSSQRCVG SEFPPRHRHA AASVGTKVYI FGGLYNDKIV
401: SSMHILDTKD LQWKEVEQQG QWPCARHSHA MVAYGSQSFM FGGYNGENVL NDLYSFDVQS CSWKLEVISG KWPHARFSHS MFVYKHTIGI IGGCPVSQNC
501: QELTLLDLKH RLWRSVRLEF MNKELFVRST ASILGDDLIV IGGGAACYAF GTKFSEPVKI NLVQSVTMSE NHLPPQPEDV SLESNKNNAD LKTETSLSQP
601: WVIQLERKYA KFGKDILKSF GWLDLERKVY SNEKGLCICF PVTENFSELF HEKQLLGKDF ERSEENNLTK GLSLKDISCS AALNLLKEHG AKKLINVAFE
701: AKKVAKSPLQ RMREDITSIL KQKGLPEELL DELPQKWERL GDIVVVPATS FKDPTWSSIN DEVWCAVSKS LSANRLARQG RVEPNGTRDS TLEILVGDNG
801: WVNHRENGIL YSFDATKCMF SWGNLSEKLR MGNMACENEV VVDLFAGIGY FVLPFLVRAK AKLVYACEWN PHAIEALRRN VEANSVSERC IILEGDNRIT
901: APKGVADRVN LGLIPSSEGS WVTAIQALRP EGGILHVHGN VKDSDESSWG EHVTKTLSDI ARAEGRSWEV TVEHIEKVKW YAPRIRHLVA DVRCR
Arabidopsis Description
tRNA wybutosine-synthesizing protein 2/3/4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4K1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.