Factsheet for Solyc01g067480.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058372	Potato	mitochondrion	48.4	99.38
PGSC0003DMT400058369	Potato	mitochondrion	40.03	83.49
PGSC0003DMT400050298	Potato	cytosol, plastid	39.88	69.68
VIT_05s0020g01740.t01	Wine grape	mitochondrion	73.97	67.78
KRH02216	Soybean	mitochondrion	71.08	65.96
CDY13903	Canola	mitochondrion	65.6	63.95
KRH11220	Soybean	mitochondrion	69.71	63.79
KRH50909	Soybean	nucleus	70.17	63.41
KRH21038	Soybean	mitochondrion	68.19	63.1
Bra002170.1-P	Field mustard	mitochondrion	65.6	61.57
AT5G18590.1	Thale cress	mitochondrion	66.21	61.44
CDX92598	Canola	mitochondrion	65.45	61.43
GSMUA_Achr3P23920_001	Banana	mitochondrion	60.58	55.98
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	57.99	53.51
TraesCSU01G068300.1	Wheat	mitochondrion	54.03	52.13
OQU83951	Sorghum	mitochondrion	54.49	52.11
TraesCS4D01G147200.1	Wheat	mitochondrion	53.73	51.61
TraesCS4A01G167800.1	Wheat	mitochondrion	53.58	51.46
HORVU4Hr1G032550.32	Barley	mitochondrion	52.97	50.8
Zm00001d048718_P010	Maize	mitochondrion	53.58	50.65
KXG23613	Sorghum	mitochondrion	52.97	50.29
TraesCS5B01G100500.1	Wheat	mitochondrion	50.23	48.1
TraesCS5D01G106700.1	Wheat	mitochondrion	50.23	48.1
TraesCS5A01G094400.1	Wheat	mitochondrion	50.23	48.03
Os12t0538800-01	Rice	mitochondrion, nucleus	50.84	47.85
HORVU5Hr1G025430.25	Barley	mitochondrion	46.42	43.63
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	50.38	43.27
Os11t0657000-01	Rice	mitochondrion	10.2	41.36
Solyc11g007960.1.1	Tomato	cytosol	22.37	29.88
Solyc01g099350.2.1	Tomato	extracellular	25.42	24.96
Solyc05g024410.2.1	Tomato	cytosol, extracellular, plastid	10.81	21.78
Solyc11g007320.1.1	Tomato	cytosol	13.24	17.37
Solyc03g111390.2.1	Tomato	nucleus	15.68	15.24
Solyc03g114960.2.1	Tomato	nucleus	11.87	14.39
Solyc01g100600.2.1	Tomato	cytosol	8.83	11.62
Solyc05g055610.2.1	Tomato	cytosol	15.22	10.06

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	InterPro:IPR015915
UniProt:K4AWZ6	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF01344	PFAM:PF13415	PANTHER:PTHR23244
PANTHER:PTHR23244:SF308	SUPFAM:SSF117281	EnsemblPlantsGene:Solyc01g067480.2	EnsemblPlants:Solyc01g067480.2.1	UniParc:UPI0002762F74	SEG:seg

Description

No Description!

Coordinates

chr1:+:76176452..76188832

Molecular Weight (calculated)

71282.9 Da

IEP (calculated)

9.505

GRAVY (calculated)

-0.404

Length

657 amino acids

Sequence
(BLAST)

001: MFGFSKRRMK LGRLNSAQGT RSPMRHPKRS SNSSGEAVPP SNNDSEEKSC QCSSGAPEFN DCASGGSENW MLLSIAGEKP TPRFNHAAAV VGNKMVVVGG
101: ETGSRMLEDV QVLNFDSFSW TTASSKLYLS PTSLPLKIPA CKGHALVQWG KKILMVGGKT DPSSDKVSVW AFDTETECWS LLEAKGDVPV ARSGHTVLRA
201: SSVLILFGGE DVKRRKLNDL HMFDLKSLTW LPLHCTGTGP SPRSNHVSAL YDDKLLLIFG GSSKSRTLND LYTLDFETMA WSRIKIRGFH PSPRAGCCGV
301: LCGTKWYIAG GGSRKRRHAE TLIFDVLKLE WSVAVASPAS SITTNKGFSL VLVQHKERDF LVGFGGFKKD PSNEVEVLIM EKNELSMGRR SSLSKAAGNL
401: LSGNRLTSTG PASQPVNGTT TSHVDSIARQ NLASAVEHHG SGRKSLSESL LIDPSSVSGN VSLRKQFSND EDTSAKMTKT SGDESPSQEQ GAKQLDIGLK
501: TCSNGAGLPA SSGACQQHEA KLSSLMRKNG ILEGQLAAAL AGREAAVRSK QDMEKKMSDA VKEMELLKEK LASVEMAQEE ANSLSNIVHS DNVRLEHDVA
601: FLKAVMDDTQ KELHSTRGVL AGERARAFQL QVEVFHLKQR LQSLENRSPT PRKPFHV

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.