Factsheet for PGSC0003DMT400058369

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g067480.2.1	Tomato	mitochondrion	83.49	40.03
VIT_05s0020g01740.t01	Wine grape	mitochondrion	60.95	26.78
KRH02216	Soybean	mitochondrion	57.14	25.42
KRH11220	Soybean	mitochondrion	56.19	24.65
KRH21038	Soybean	mitochondrion	54.6	24.23
AT5G18590.1	Thale cress	mitochondrion	53.33	23.73
KRH50909	Soybean	nucleus	54.29	23.52
CDY13903	Canola	mitochondrion	50.16	23.44
Bra002170.1-P	Field mustard	mitochondrion	51.75	23.29
CDX92598	Canola	mitochondrion	51.43	23.14
GSMUA_Achr3P23920_001	Banana	mitochondrion	49.21	21.8
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	44.13	19.52
OQU83951	Sorghum	mitochondrion	40.0	18.34
Zm00001d048718_P010	Maize	mitochondrion	39.37	17.84
TraesCS4D01G147200.1	Wheat	mitochondrion	38.73	17.84
KXG23613	Sorghum	mitochondrion	39.05	17.77
TraesCSU01G068300.1	Wheat	mitochondrion	38.41	17.77
TraesCS4A01G167800.1	Wheat	mitochondrion	38.41	17.69
Os12t0538800-01	Rice	mitochondrion, nucleus	37.78	17.05
HORVU4Hr1G032550.32	Barley	mitochondrion	36.51	16.79
TraesCS5D01G106700.1	Wheat	mitochondrion	36.51	16.76
TraesCS5B01G100500.1	Wheat	mitochondrion	36.19	16.62
TraesCS5A01G094400.1	Wheat	mitochondrion	35.56	16.3
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	38.73	15.95
HORVU5Hr1G025430.25	Barley	mitochondrion	27.3	12.3
PGSC0003DMT400050298	Potato	cytosol, plastid	10.48	8.78
PGSC0003DMT400060067	Potato	cytosol	9.52	4.02
PGSC0003DMT400039402	Potato	nucleus	6.03	2.81
PGSC0003DMT400007146	Potato	cytosol	5.4	2.6
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	2.86	2.02
PGSC0003DMT400046550	Potato	cytosol	0.63	1.77
PGSC0003DMT400070308	Potato	cytosol	1.59	1.37
PGSC0003DMT400058372	Potato	mitochondrion	0.95	0.94
PGSC0003DMT400063503	Potato	extracellular	0.0	0.0
Os11t0657000-01	Rice	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400058369	EnsemblPlantsGene:PGSC0003DMG401022673	ncoils:Coil	PANTHER:PTHR23244	PANTHER:PTHR23244:SF308	PGSC:PGSC0003DMG401022673
SEG:seg	UniParc:UPI0002963BA0	UniProt:M1C2K1	MapMan:35.2	:	:

Description

Acyl-CoA binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG401022673]

Coordinates

chr1:+:58842160..58844996

Molecular Weight (calculated)

34072.9 Da

IEP (calculated)

7.091

GRAVY (calculated)

-0.636

Length

315 amino acids

Sequence
(BLAST)

001: MGRRSSLSKA AGNLLSGNRL TSTGPASQPV NGTTTSHVDS IARQNLASAV EHHGSGRKSL SESLLIDPSS VSGNVSLRKQ FSNDEDASAK MTKTSGDESP
101: SQEQGAKQLD IGGPKTSSNG GKIMSEEMST ISESGHLPTH YRQASANFFQ DTDDFVFQEG DYKAGLPASS GACQQYEAKL SSLMRKNGIL EGQLATALAG
201: REAAVKSKQD MEKKMADAVK EMELLKEKLA SVEMAQEEAN SLSNIVHSDN VRLEHDVAFL KAVMDDTQKE LHTTRGVLAG ERARAFQLQV EVFHLKQRLQ
301: SLENRSPTPR KPFHV

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.