Factsheet for GSMUA_Achr5P26950_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P23920_001	Banana	mitochondrion	77.39	77.5
PGSC0003DMT400058372	Potato	mitochondrion	27.95	62.19
Solyc01g067480.2.1	Tomato	mitochondrion	53.51	57.99
VIT_05s0020g01740.t01	Wine grape	mitochondrion	56.46	56.07
TraesCS4D01G147200.1	Wheat	mitochondrion	53.51	55.7
TraesCSU01G068300.1	Wheat	mitochondrion	53.23	55.65
OQU83951	Sorghum	mitochondrion	53.51	55.46
TraesCS4A01G167800.1	Wheat	mitochondrion	53.23	55.41
PGSC0003DMT400050298	Potato	cytosol, plastid	29.21	55.32
Zm00001d048718_P010	Maize	mitochondrion	53.09	54.39
Os11t0657000-01	Rice	mitochondrion	12.36	54.32
HORVU4Hr1G032550.32	Barley	mitochondrion	52.25	54.31
KRH02216	Soybean	mitochondrion	53.51	53.81
KRH21038	Soybean	mitochondrion	53.37	53.52
KRH11220	Soybean	mitochondrion	53.93	53.48
TraesCS5D01G106700.1	Wheat	mitochondrion	50.98	52.92
TraesCS5B01G100500.1	Wheat	mitochondrion	50.98	52.92
KRH50909	Soybean	nucleus	53.65	52.54
TraesCS5A01G094400.1	Wheat	mitochondrion	50.56	52.4
CDY13903	Canola	mitochondrion	49.58	52.37
Os12t0538800-01	Rice	mitochondrion, nucleus	50.98	52.01
KXG23613	Sorghum	mitochondrion	50.28	51.73
Bra002170.1-P	Field mustard	mitochondrion	50.0	50.86
CDX92598	Canola	mitochondrion	50.0	50.86
AT5G18590.1	Thale cress	mitochondrion	49.72	50.0
HORVU5Hr1G025430.25	Barley	mitochondrion	47.33	48.21
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	47.61	44.31
PGSC0003DMT400058369	Potato	mitochondrion	19.52	44.13
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	23.31	24.63
GSMUA_Achr9P23600_001	Banana	cytosol	19.38	24.56
GSMUA_Achr6P20340_001	Banana	plastid	23.31	24.34
GSMUA_Achr8P07640_001	Banana	cytosol	13.48	19.24
GSMUA_Achr3P30430_001	Banana	cytosol	12.22	18.51
GSMUA_Achr8P29940_001	Banana	cytosol	14.89	16.83
GSMUA_Achr10P...	Banana	cytosol	5.34	16.74
GSMUA_Achr10P...	Banana	nucleus	8.71	12.53
GSMUA_Achr6P29460_001	Banana	cytosol	14.04	9.37

Protein Annotations

EnsemblPlants:GSMUA_Achr5P26950_001	EnsemblPlants:GSMUA_Achr5T26950_001	EnsemblPlantsGene:GSMUA_Achr5G26950_001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil	PANTHER:PTHR23244
PANTHER:PTHR23244:SF308	PFAM:PF01344	PFAM:PF13418	SUPFAM:SSF117281	UniParc:UPI00029625E2	UniProt:M0T220
MapMan:35.1	:	:	:	:	:

Description

kelch repeat protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G26950_001]

Coordinates

chr5:+:27591448..27598579

Molecular Weight (calculated)

78977.2 Da

IEP (calculated)

9.080

GRAVY (calculated)

-0.419

Length

712 amino acids

Sequence
(BLAST)

001: MPKIFGFSRR RKKIGRLKVH LKDPLQGTRS PIRSSNQLSQ TNMLHFPKEE NGGLASSSGR SDDPNCHFSS HTCDLHNCSL ESSKNWNLLP TYGNKPTPRF
101: QHAATVVGSK MVVVGGDSSH DLLDDTQILS LDSLTWASAT SKVYSSTGTI SLNIPACKGH TLVSWGKSAL LIGGKTEPLS DKLSVWSFDV ETECWSHIEA
201: KGNIPVARSG HTVLRAGAVL ILFGGEDVKG RKLNDLFMFD LKSLTWLPLH YKGTGPSART NHVAALYEDK LLFIFGGQSK SRILNDLHSL DFETMIWSRV
301: KVHGHRPSPR AGCCSALCGS KWYITGGGSK RRRHAETLVF DVLKLEWSAS IMSPSVSITT NRVTNVKLFD GFSLVPVHHK NITSLVAFGG FKKEPSNQVE
401: IFFLVTNEHS MIWPSAPYMG FLPYEECAAN IKELGAHLKT VSSSTSTDPF ARNSLASTLE QQISGRKSLS DDPCVSTDIS CRKLFHQDQD FGLATKVQRP
501: LEDEKYTNDG QLMLNNPSSK RSKRQQPEIK MDVAGIQDSM EKMHVESGGG LVLTNPTDVY QVYETKTASL TRKNVLLEEQ LKAATTSREI AERNLSCTVE
601: RKQDRERKLA DALREVELLK DKVAGMEVAQ EEANGLSNIG HSDNVRLEHD VAFLKAILED TQKASLELHS TRGVLAGERA RAFQLQVEVF HLKQRLQSGD
701: HRAPTPRKPF QM

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.