Factsheet for GSMUA_Achr10P16650_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G342300.1	Wheat	nucleus	82.38	30.71
KXG26585	Sorghum	nucleus	82.82	28.57
TraesCS2A01G321200.1	Wheat	nucleus	82.82	28.44
TraesCS2B01G361300.1	Wheat	nucleus	82.38	28.29
Os04t0483600-01	Rice	nucleus	81.94	28.1
Zm00001d003259_P006	Maize	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	80.62	25.77
HORVU2Hr1G083780.14	Barley	nucleus, plastid	70.04	23.84
GSMUA_Achr8P07640_001	Banana	cytosol	18.06	8.22
GSMUA_Achr3P30430_001	Banana	cytosol	16.74	8.09
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	18.94	6.38
GSMUA_Achr6P20340_001	Banana	plastid	18.5	6.16
GSMUA_Achr8P29940_001	Banana	cytosol	16.74	6.03
GSMUA_Achr9P23600_001	Banana	cytosol	14.1	5.69
GSMUA_Achr3P23920_001	Banana	mitochondrion	17.62	5.63
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	16.74	5.34
GSMUA_Achr6P29460_001	Banana	cytosol	18.94	4.03
GSMUA_Achr10P...	Banana	nucleus	6.17	2.83

Protein Annotations

EnsemblPlants:GSMUA_Achr10P16650_001	EnsemblPlants:GSMUA_Achr10T16650_001	EnsemblPlantsGene:GSMUA_Achr10G16650_001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	ncoils:Coil	PANTHER:PTHR23244	PANTHER:PTHR23244:SF410
PFAM:PF13415	PFAM:PF13418	SEG:seg	SUPFAM:SSF117281	UniParc:UPI000295E532	UniProt:M0RIU0
MapMan:35.2	:	:	:	:	:

Description

Putative Kelch domain-containing protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr10G16650_001]

Coordinates

chr10:+:24105419..24109564

Molecular Weight (calculated)

26474.7 Da

IEP (calculated)

9.400

GRAVY (calculated)

-0.714

Length

227 amino acids

Sequence
(BLAST)

001: MGKKTKKPGK GKEKTERKTA KAEEKRVRRE SKKNVSQEDD IDAILKNIQK EEAKKKEVHV EENVPAPSPR SGCSLIINPL KDTELILYGG EFYNGNKTFV
101: YGDLYRYDVE KNEWKLISSP NSPPPRSAHQ AVAWKDHIYI FGGEFTSPNQ ERFHHYKDFW MLDLKTNQWE QLLLKGCPSA RSGHRMVLYK HKIIVFGGFY
201: DTLREVRFDF FLAQAYVILF CLCETCF

Best Arabidopsis Sequence Match ( AT5G50310.1 )
(BLAST)

001: MGKKTKKPGK GKEKTERKTA KADEKKARRE GKKLSPEDDI DAILLNIQKE EAKKKEVHVE ENVAAPSPRS NCSLTINPLK ETELILYGGE FYNGQKTYVY
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR

Arabidopsis Description

AT5g50310/MXI22_1 [Source:UniProtKB/TrEMBL;Acc:Q945N1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.