CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92111	Soybean	cytosol	26.19	96.35
KRG92113	Soybean	cytosol	69.05	94.82
VIT_13s0019g05290.t01	Wine grape	cytosol	68.45	67.91
PGSC0003DMT400070308	Potato	cytosol	47.02	64.93
Solyc11g007960.1.1	Tomato	cytosol	59.72	61.18
Bra005805.1-P	Field mustard	cytosol	59.92	60.04
CDY58438	Canola	cytosol	59.92	60.04
CDY11290	Canola	cytosol	59.92	60.04
AT5G04420.3	Thale cress	cytosol	60.91	59.73
TraesCS6B01G450700.1	Wheat	cytosol	51.19	48.68
Os02t0822800-01	Rice	cytosol	49.8	48.36
TraesCS6D01G389800.2	Wheat	cytosol	50.79	47.85
HORVU6Hr1G093000.5	Barley	cytosol	50.4	47.57
OQU85983	Sorghum	cytosol	48.02	46.27
GSMUA_Achr9P23600_001	Banana	cytosol	50.99	45.73
TraesCS6A01G406400.1	Wheat	cytosol	50.99	44.62
Zm00001d051876_P002	Maize	nucleus	47.02	39.9
KRG96823	Soybean	cytosol, plastid	42.06	32.67
KRH68531	Soybean	nucleus	42.26	32.37
KRG92884	Soybean	nucleus	41.67	31.87
KRH43755	Soybean	cytosol	14.88	22.87
KRH02216	Soybean	mitochondrion	28.77	20.48
KRH21038	Soybean	mitochondrion	27.98	19.86
KRH11220	Soybean	mitochondrion	27.98	19.64
KRH50909	Soybean	nucleus	28.17	19.53
KRG92046	Soybean	cytosol	18.65	18.88
KRG90521	Soybean	peroxisome	20.04	16.01
KRH33805	Soybean	nucleus	19.84	15.85
KRH56785	Soybean	nucleus	19.25	15.4
KRH03160	Soybean	cytosol	19.05	15.34
KRH68432	Soybean	cytosol, nucleus, plastid	19.25	15.3
KRH63188	Soybean	cytosol	18.45	15.17
KRH54725	Soybean	cytosol	18.25	15.01
KRH63715	Soybean	nucleus	17.46	13.33
KRH54239	Soybean	nucleus	17.26	13.18
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	18.45	12.97
KRH02069	Soybean	cytosol	12.5	10.23
KRH51088	Soybean	cytosol	19.05	8.93

Protein Annotations

EntrezGene:100775953	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02006612	ncoils:Coil	EnsemblPlantsGene:GLYMA_10G198000
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	UniProt:K7LKF5
EnsemblPlants:KRH34674	ProteinID:KRH34674	ProteinID:KRH34674.1	ProteinID:KRH34675.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PFAM:PF01344	PFAM:PF13415	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SUPFAM:SSF117281	SUPFAM:SSF50965
UniParc:UPI00023CD5F9	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:42923799..42930121

Molecular Weight (calculated)

55776.1 Da

IEP (calculated)

5.048

GRAVY (calculated)

-0.353

Length

504 amino acids

Sequence
(BLAST)

001: MEVNNWHKEL TYDEWVPITV SGARPAARYK HATAVVDEKL YIAGGSRNGR YLSDVQVFDL RSLMWSSLKL KANVGKDDDD SSQEILPATS GHNMIRWGEK
101: LLLLGGNSRE SSAELTVRYI DIETCQFGVI KTSGDVPVAR VGQSATMVGS RVILFGGEDM SRKLLNDVHV LDLESMTWEM IKTTQTPPSP RYDHSAAIQG
201: ERYLLIFGGC SHSIFFNDLH LLDMQTMEWS QPQTQGDLVS PRAGHAGITI DESWFIVGGG DNRSGCPETL VLDMPKLVWS VLTVVKQKDS LSSEGLSVCS
301: AKIDGEKYLL AFGGYNGRYS NEVFVMRPKA KDTMRPKIFQ SPAAAAAAAS VTSAYALSKS EKLDFIQLDD INSKLSANGH PKDDVTDKVE AIKEEKRLLE
401: LSIAEVRAEN SKLGGEIEEI NNTHAELTKE LQSVQAQLVA ERSRCFNLEA KIAELQKLLE SMQSVEDEVQ ALREKKSALD QEMELAATAE RKSSGWRWFG
501: GSET

Best Arabidopsis Sequence Match ( AT5G04420.2 )
(BLAST)

001: MEEIRKEIDV GDWHSNLAHD EWTPLPVSGS RASARYKHAA VVVDEKLYIV GGSRNGRYLS DVQVFDLRSL TWSSLKLKTE SSSADNIQED DGSSLREAFP
101: AISDHRMIKW GNKLLLIGGH SKKSSDNMLV RFIDLETHSC GVIDVFGNVP ASRGGHSITL VGSRVLVFGG EDKNRRLLND LHVLHLETMT WDVVETKQTR
201: PVPRFDHTAA THSDRYLLIF GGCSHSIFYS DLHILDLQTM EWSQPHVQGD VVTPRAGHAG ITIDENWYIV GGGDNSTGCL ETLVLNMSKL VWSTSTHVEA
301: RHPLASEGLS VCSASVFGEN ILVAFGGYNG KYNNDIFVMR LKPGESSHPK IFKSPAAAAA AASVTAAYAI AKSDKSDYPP PANPTLNGNG NSLPERDIRN
401: RIDTIKEEKR ALESSIAETQ VENAKLREKI DEVNSSHTEL SQELQSVEGQ LISERSRCFK LEAQIAELQK ALESGQSIEA EVEMLRRQRS ASDEEEDGTV
501: QRQGSAGVWG LFGR

Arabidopsis Description

AT5G04420 protein [Source:UniProtKB/TrEMBL;Acc:Q9LZ83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.