CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
cytosol 1
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	90.54	80.06
KRH33805	Soybean	nucleus	70.03	70.36
KRG90521	Soybean	peroxisome	69.4	69.73
VIT_14s0060g01090.t01	Wine grape	nucleus	57.26	56.72
GSMUA_Achr8P29940_001	Banana	cytosol	51.89	52.22
TraesCS3D01G195400.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	48.11	50.83
TraesCS3B01G221000.2	Wheat	cytosol, mitochondrion, nucleus, vacuole	48.11	50.41
TraesCS3A01G192200.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	47.79	50.0
EES00630	Sorghum	cytosol	47.95	49.59
Os01t0300900-01	Rice	cytosol	48.74	49.52
Zm00001d040606_P001	Maize	cytosol	48.27	49.35
HORVU3Hr1G040720.1	Barley	mitochondrion, nucleus, peroxisome, vacuole	48.11	49.27
Zm00001d009123_P001	Maize	cytosol	47.48	48.16
PGSC0003DMT400007146	Potato	cytosol	46.06	44.65
Solyc01g100600.2.1	Tomato	cytosol	29.02	36.87
KRH43755	Soybean	cytosol	11.83	22.87
KRH03160	Soybean	cytosol	21.92	22.2
KRH54725	Soybean	cytosol	21.45	22.19
KRH63188	Soybean	cytosol	21.45	22.19
KRH56785	Soybean	nucleus	21.61	21.75
KRG92046	Soybean	cytosol	16.09	20.48
KRG92113	Soybean	cytosol	11.83	20.44
KRH34674	Soybean	cytosol	15.3	19.25
KRG92111	Soybean	cytosol	3.94	18.25
KRG96823	Soybean	cytosol, plastid	17.67	17.26
KRH68531	Soybean	nucleus	17.82	17.17
KRG92884	Soybean	nucleus	17.82	17.15
KRH63715	Soybean	nucleus	16.56	15.91
KRH54239	Soybean	nucleus	15.93	15.3
KRH21038	Soybean	mitochondrion	17.03	15.21
KRH02216	Soybean	mitochondrion	16.88	15.11
KRH50909	Soybean	nucleus	17.19	14.99
KRH11220	Soybean	mitochondrion	16.72	14.76
KRH02069	Soybean	cytosol	10.41	10.71
KRH51088	Soybean	cytosol	17.67	10.42

Protein Annotations

EMBL:ACUP02002116	EnsemblPlants:KRH68432	EnsemblPlantsGene:GLYMA_03G231000	EntrezGene:100814299	Gene3D:2.120.10.80	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244
PANTHER:PTHR23244:SF401	PFAM:PF01344	PFAM:PF13415	PFAM:PF13418	ProteinID:KRH68432	ProteinID:KRH68432.1
SUPFAM:SSF117281	UniParc:UPI000294C487	UniProt:I1JR48	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr3:+:43248867..43253267

Molecular Weight (calculated)

69540.5 Da

IEP (calculated)

8.383

GRAVY (calculated)

-0.425

Length

634 amino acids

Sequence
(BLAST)

001: MSSSLPQVAK NKAMWLHPKV LGFNPPERWG HSACFSNGLM YVFGGCCGGL HFCDVLTLDL NKMVWSKLTT TGEKPGPRDS HSAVFVGHKM IVFGGTNGFK
101: KMNHIHVLDL VTKEWVRPEC KGTPPSPRES HTATLVGDER IVIFGGSGEG HANYLNDLHI LDLRTMSWTS SELKGDFPVP RDSHSTLAIG NKLIVYGGDS
201: GDQYHGNVHM LDMTTMTWSK LSIQGSPPGV RAGHAAVNIG TKVYIIGGVG DKRYYNDVWI FDICNFTWTQ LDIDFHQPQG RFSHTAVAAG MDIAIYGGCG
301: EDERPLNELL VLQLGAEHPN GRYYIPMCKP FGTYWNQEKK IIPGEADTHS KTLLVRNNVE TFGQGAYEVA SEKSPPYHFD SDTSRQKRGR IAAAKVWDVK
401: SEQEENFLTL SLHSSPCQSD QEQTPSQKAN TLFPSTCQHD NGSNYKRTFK TSQDLHFLRH QLKQEHCLNV HEGRKRAQLQ GAEQKTMGQG SIQHLIGAEV
501: GGRVDEPFDS VSLSPAAVNG RIFRGVIFSP GAGVVSKVAN VKPNCSLTSS FPSSSQAFLN SNHVGNSRAS QQAPIRLRAE PCHGSRQTPV ALPFPIMRGT
601: SNVVSKEHKI NSDLQGGLVL TLGGPASAHP QVKH

Best Arabidopsis Sequence Match ( AT1G18610.1 )
(BLAST)

001: MRWERVRQLQ QQVGLGESSS GPGKRWGHTC NAIKGGSFLY VFGGYGRDNC QTNQVHVFDA AKQIWTQPMI NGTPPPPRDS HSCTTVGDNL FVFGGTDGVN
101: PLKDLYILDT SSHTWKCPSV RGEGPEAREG HSATLVGKRL FVFGGCGKSS GINEEIYYND VYIFNTETFV WKRAVTIGNP PSARDSHSCS SWKNKLVVIG
201: GEDGHDYYLS DVHILDTDTL IWKELNTSGQ LLTPRAGHVT VSLGRNFFVF GGFTDAQNLY DDLYVLDVDT CIWSKVLTMG EGPSARFSSA GACLDPHKAG
301: FLVIVGGCNK NLEALDDMFY LQTGLGYDAR FDQNVGMLSL KKQLKIKCQE QSHASSLYDK SLVRINMDHQ GRGNFGLNTC QFNEGKMMFQ ARITESYPVG
401: YTMETMIDGK VLRGVLFSNK RSSILPADQS FSRKRPAMSN GDQDNRSKIS RTLIKDQANA VESKDSQLNG MEAGIDTISN PLGVNITTVA VAPHETETSV
501: VTSDAKNQDA SQLDMGTVNT VNTAPSSVPQ VDEASLESRN AITIDDRANK TGLGES

Arabidopsis Description

F25I16.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ82]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.