Factsheet for TraesCS5B01G100100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G106400.1	Wheat	cytosol	95.46	96.01
TraesCS5A01G094000.1	Wheat	cytosol	95.46	95.83
HORVU5Hr1G025310.1	Barley	cytosol	86.39	95.01
Os12t0540800-01	Rice	extracellular	73.72	74.0
EES16101	Sorghum	cytosol, nucleus, plastid	71.46	70.13
Zm00001d041692_P001	Maize	nucleus	65.22	63.54
GSMUA_Achr6P20340_001	Banana	plastid	58.03	45.01
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	57.28	44.96
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	56.71	44.84
VIT_14s0060g02410.t01	Wine grape	plastid	54.63	42.88
Solyc01g099350.2.1	Tomato	extracellular	53.31	42.15
KRG96823	Soybean	cytosol, plastid	51.42	41.91
KRH68531	Soybean	nucleus	51.98	41.79
CDX74147	Canola	cytosol, nucleus, plastid	52.36	41.59
KRG92884	Soybean	nucleus	51.8	41.58
CDY05166	Canola	cytosol, nucleus, plastid	52.17	41.44
Bra040219.1-P	Field mustard	cytosol	51.98	41.35
CDY27769	Canola	cytosol	51.98	41.29
Bra039439.1-P	Field mustard	cytosol	51.98	41.23
CDY18777	Canola	cytosol	51.61	41.05
CDY18797	Canola	cytosol	51.61	40.99
CDY40708	Canola	cytosol	51.42	40.84
Bra001147.1-P	Field mustard	cytosol	52.55	40.7
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	50.85	40.33
AT3G05420.2	Thale cress	cytosol	50.85	40.21
CDY05568	Canola	plastid	50.66	40.18
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	50.66	40.12
CDY25029	Canola	cytosol, nucleus, plastid	50.28	39.7
TraesCS6B01G450700.1	Wheat	cytosol	37.24	37.17
PGSC0003DMT400063503	Potato	extracellular	22.12	34.93
TraesCS5B01G165000.1	Wheat	mitochondrion	15.5	25.08
TraesCS5B01G100500.1	Wheat	mitochondrion	28.17	21.72
TraesCS5B01G515900.1	Wheat	mitochondrion	18.15	19.09
TraesCS3B01G221000.2	Wheat	cytosol, mitochondrion, nucleus, vacuole	19.09	16.69
TraesCS2B01G361300.1	Wheat	nucleus	17.2	13.77
TraesCS2B01G248800.1	Wheat	cytosol	17.96	8.74

Protein Annotations

EnsemblPlants:TraesCS5B01G100100.1	EnsemblPlantsGene:TraesCS5B01G100100	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil	PANTHER:PTHR23244
PANTHER:PTHR23244:SF398	PFAM:PF01344	PFAM:PF13415	SEG:seg	SUPFAM:SSF50965	MapMan:35.1

Description

No Description!

Coordinates

chr5B:-:133010986..133014963

Molecular Weight (calculated)

58355.2 Da

IEP (calculated)

4.970

GRAVY (calculated)

-0.600

Length

529 amino acids

Sequence
(BLAST)

001: MPSIQEPLHF KPQEPKVVVA ENENDKMVDV QDKEVTMEGL CSVAAYDQWT PLSVPGQRPK PRYKHGAAVV QEKMYVFGGN HNGRYLGDIQ VLDFKSLSWS
101: KLEAKVQSES AEPASVAPCA GHSLIPSGNK ILSLAGHTRE HTESLSVKEF DPQTCTWSIL RTYGKSPSSR GGQSVTRVGD TLVVFGGEGG GRSLLNDLHV
201: LDLETMTWDE FESTGTTPSP RSEHAAACYA DWYLLIFGGG SHSTCFSDLY LLDMQTMGWS RPEQHGIIPE PRAGHAGVTV GDNWVITGGG NSKKGVPETL
301: VLNMSTLVWS VVTSFEGRAP PTSEGSSLVL HTINGEDFLL SFGGYSGRYS NEVYALKTSL RPSVSSSRID ELETNGMTPL SAEVNSSREP IFEIEELRDD
401: KNKKGGDISK TLVQAVKREK NQVEERLEQE KLQSFNLKKE LADVENKNAE LTKELQSVRD QLSDEAARAS KLEDEVSEIQ QRLQKMETLE KEFELLRSER
501: GGGSDESGSG SNKRPSSVGF RRWYGDDER

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.