Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d052104_P001 Maize extracellular 90.64 90.64
EES07654 Sorghum plastid 58.33 72.68
TraesCS6D01G318700.1 Wheat cytosol 61.92 72.52
TraesCS6A01G337900.1 Wheat extracellular 68.08 71.56
TraesCS6A01G339200.1 Wheat extracellular, unclear 71.92 71.56
HORVU6Hr1G081640.1 Barley endoplasmic reticulum, extracellular, vacuole 71.92 71.47
TraesCS6B01G370100.1 Wheat extracellular 71.79 71.43
TraesCS6D01G319800.1 Wheat unclear 71.41 71.05
TraesCS6A01G339100.1 Wheat extracellular, unclear 71.03 71.03
TraesCS6A01G337800.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 71.41 70.87
TraesCS6B01G368500.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 71.28 70.74
TraesCS6B01G369400.1 Wheat extracellular 70.38 70.47
TraesCS6B01G368600.1 Wheat extracellular 70.38 69.94
HORVU6Hr1G081710.1 Barley extracellular 70.0 69.73
TraesCS5D01G322200.1 Wheat extracellular 70.0 69.64
TraesCS5A01G316000.1 Wheat extracellular 70.0 69.55
TraesCS6A01G036800.1 Wheat extracellular 69.1 68.49
HORVU6Hr1G081750.1 Barley extracellular, plasma membrane 72.31 68.12
TraesCS6B01G370000.1 Wheat peroxisome, plastid, vacuole 71.41 67.19
TraesCS6B01G051400.1 Wheat extracellular 67.69 66.92
TraesCS6D01G319900.2 Wheat golgi, unclear 71.03 66.43
HORVU6Hr1G081730.1 Barley plastid 69.36 65.66
HORVU6Hr1G018160.1 Barley extracellular, mitochondrion, plasma membrane 67.31 64.18
TraesCS7B01G452500.1 Wheat extracellular 63.59 63.51
EES07632 Sorghum extracellular 60.64 60.1
GSMUA_Achr6P03640_001 Banana plastid 46.28 57.39
CDX97539 Canola plastid 34.49 55.93
Os02t0779000-00 Rice extracellular 45.38 55.05
Os02t0780200-01 Rice extracellular 55.13 54.43
PGSC0003DMT400088012 Potato extracellular 52.44 53.32
KRH47618 Soybean extracellular 52.82 53.16
Solyc06g062950.1.1 Tomato extracellular 52.82 53.09
PGSC0003DMT400012537 Potato extracellular 51.92 52.19
AT3G14067.1 Thale cress plasma membrane 51.92 52.12
Bra027376.1-P Field mustard extracellular, plasma membrane, vacuole 51.67 51.93
CDY52259 Canola extracellular, plasma membrane, vacuole 48.85 51.77
VIT_09s0002g01040.t01 Wine grape extracellular 51.15 51.75
CDY33251 Canola plasma membrane 51.41 51.74
Bra021529.1-P Field mustard plasma membrane 50.9 51.23
CDY39093 Canola plasma membrane 50.9 51.23
VIT_09s0002g01030.t01 Wine grape endoplasmic reticulum, extracellular, golgi 51.54 51.02
EER90842 Sorghum extracellular, plasma membrane 48.21 49.21
KXG38048 Sorghum extracellular 48.08 48.45
EER94293 Sorghum extracellular 45.9 46.68
EER96794 Sorghum extracellular, plasma membrane 45.13 45.48
EES12694 Sorghum extracellular, golgi, plasma membrane 44.74 44.92
EES13951 Sorghum extracellular 45.64 44.22
EER92571 Sorghum extracellular, plasma membrane 44.49 43.92
OQU93252 Sorghum extracellular 42.69 42.21
KXG35865 Sorghum extracellular, mitochondrion 41.79 39.95
EER90461 Sorghum extracellular, golgi 39.1 38.46
EER88633 Sorghum cytosol, extracellular, mitochondrion, plasma membrane 38.72 37.75
KXG33202 Sorghum extracellular, plasma membrane, vacuole 38.59 37.3
OQU84580 Sorghum mitochondrion 41.15 36.07
KXG33299 Sorghum plastid 38.08 35.91
KRH06199 Soybean endoplasmic reticulum, nucleus 52.69 28.8
Protein Annotations
Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30MapMan:35.1EntrezGene:8082682
UniProt:C5XTM2EnsemblPlants:EES05894ProteinID:EES05894ProteinID:EES05894.1GO:GO:0003674GO:GO:0003824
GO:GO:0004252GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538
InterPro:IPR036852InterPro:IPR037045InterPro:PA_domainPFAM:PF00082PFAM:PF02225PFAM:PF05922
PRINTS:PR00723ScanProsite:PS00138PANTHER:PTHR10795PANTHER:PTHR10795:SF406InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sf
InterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-relInterPro:Peptidases_S8_3InterPro:S8pro/Inhibitor_I9InterPro:S8pro/Inhibitor_I9_sfEnsemblPlantsGene:SORBI_3004G318700
SUPFAM:SSF52743unigene:Sbi.20046SignalP:SignalP-noTMUniParc:UPI0001A85A48RefSeq:XP_002452918.1SEG:seg
Description
hypothetical protein
Coordinates
chr4:+:65406864..65409401
Molecular Weight (calculated)
80154.7 Da
IEP (calculated)
8.250
GRAVY (calculated)
0.117
Length
780 amino acids
Sequence
(BLAST)
001: MARLASALCV LLAAAVAVPA AVATESEAVE PVSTYIVHVA PAHAPRLSRP RALSGAYRSF LRDHLPARVA RPAPRLLYSY AHAATAFAAR LTGAQAAHLA
101: SQRSAVLAVV PDATQQLHTT LTPSFLRLSE SSGLLQASGG ATDVVIGLID TGVYPKDRAS FDADPSLPPP PSTFRGRCVS TSAFNASAYC NNKLVGAKFF
201: GLGYEAAHGG EVGETDSRSP LDTNGHGTHT SSTAAGSAVA NAAFFDYGKG TATGMAPRAR IATYKACWAR GCASSDILKA FDEAIKDGVN VISVSLGAVG
301: QAPPFYSDST AVGAFSAVRN GIVVSASAGN SGPGEFTAVN VAPWILTVGA STLNRQFPAN VVLGSGDTFT GTSLYAGTPL GPSKLPLVYG GSVGSSVCEA
401: GKLIASRVAG KIVVCDPGVI GGAAKGEAVK LAGGAGAIVV SSKAFGEEAL TTPHIHPATG VSFAAAEKIK KYIRTSASPV ATIVFIGTVV GGTPSSPRMA
501: SFSSRGPNLL APEILKPDVT APGVDILAAW TGENSPTELD SDTRRVKFNI ISGTSMSCPH VSGIAALLRQ AWPDWSPAAI KSALMTTAYN VDNAGDIIKD
601: MSTGTASTPF VRGAGHVDPN RALNPGLVYD VGTDDYVSFL CALGYTARQI AVLTRDGSTT DCSTRSGSVG DLNYPAFSVL FGSGGDEVTQ HRIVRNVGSN
701: VRATYTASVA SPAGVRVTVE PPTLKFSATQ QTQEYAITFA REQGSVTEKY TFGSIVWSDG EHKVTSPISV IWLASQAAEM
Best Arabidopsis Sequence Match ( AT3G14067.1 )
(BLAST)
001: MAKLSLSSIF FVFPLLLCFF SPSSSSSDGL ESYIVHVQRS HKPSLFSSHN NWHVSLLRSL PSSPQPATLL YSYSRAVHGF SARLSPIQTA ALRRHPSVIS
101: VIPDQAREIH TTHTPAFLGF SQNSGLWSNS NYGEDVIVGV LDTGIWPEHP SFSDSGLGPI PSTWKGECEI GPDFPASSCN RKLIGARAFY RGYLTQRNGT
201: KKHAAKESRS PRDTEGHGTH TASTAAGSVV ANASLYQYAR GTATGMASKA RIAAYKICWT GGCYDSDILA AMDQAVADGV HVISLSVGAS GSAPEYHTDS
301: IAIGAFGATR HGIVVSCSAG NSGPNPETAT NIAPWILTVG ASTVDREFAA NAITGDGKVF TGTSLYAGES LPDSQLSLVY SGDCGSRLCY PGKLNSSLVE
401: GKIVLCDRGG NARVEKGSAV KLAGGAGMIL ANTAESGEEL TADSHLVPAT MVGAKAGDQI RDYIKTSDSP TAKISFLGTL IGPSPPSPRV AAFSSRGPNH
501: LTPVILKPDV IAPGVNILAG WTGMVGPTDL DIDPRRVQFN IISGTSMSCP HVSGLAALLR KAHPDWSPAA IKSALVTTAY DVENSGEPIE DLATGKSSNS
601: FIHGAGHVDP NKALNPGLVY DIEVKEYVAF LCAVGYEFPG ILVFLQDPTL YDACETSKLR TAGDLNYPSF SVVFASTGEV VKYKRVVKNV GSNVDAVYEV
701: GVKSPANVEI DVSPSKLAFS KEKSVLEYEV TFKSVVLGGG VGSVPGHEFG SIEWTDGEHV VKSPVAVQWG QGSVQSF
Arabidopsis Description
SBT1.4Subtilisin-like protease SBT1.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVJ1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.