Factsheet for TraesCS6D01G319900.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, unclear
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G339100.1	Wheat	extracellular, unclear	88.97	95.13
TraesCS6B01G370000.1	Wheat	peroxisome, plastid, vacuole	91.97	92.52
HORVU6Hr1G081750.1	Barley	extracellular, plasma membrane	87.41	88.04
TraesCS6D01G319800.1	Wheat	unclear	79.62	84.69
TraesCS6D01G318700.1	Wheat	cytosol	65.83	82.43
Zm00001d052104_P001	Maize	extracellular	67.63	72.31
TraesCS5D01G322200.1	Wheat	extracellular	67.87	72.19
EES05894	Sorghum	extracellular	66.43	71.03
EES07654	Sorghum	plastid	52.64	70.13
Zm00001d018281_P001	Maize	plasma membrane	64.75	68.61
GSMUA_Achr6P03640_001	Banana	plastid	43.29	57.39
TraesCS6D01G319700.1	Wheat	golgi	54.2	57.36
CDX97539	Canola	plastid	31.53	54.68
PGSC0003DMT400088012	Potato	extracellular	48.2	52.41
PGSC0003DMT400012537	Potato	extracellular	48.56	52.19
CDY33251	Canola	plasma membrane	48.44	52.13
Solyc06g062950.1.1	Tomato	extracellular	48.44	52.06
Os02t0779000-00	Rice	extracellular	40.05	51.94
Bra027376.1-P	Field mustard	extracellular, plasma membrane, vacuole	48.32	51.93
Os02t0780200-01	Rice	extracellular	49.16	51.9
CDY52259	Canola	extracellular, plasma membrane, vacuole	45.68	51.77
Bra021529.1-P	Field mustard	plasma membrane	48.08	51.74
CDY39093	Canola	plasma membrane	48.08	51.74
KRH47618	Soybean	extracellular	48.08	51.74
VIT_09s0002g01040.t01	Wine grape	extracellular	47.48	51.36
AT3G14067.1	Thale cress	plasma membrane	47.72	51.22
VIT_09s0002g01030.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	48.08	50.89
TraesCS4D01G076000.1	Wheat	extracellular	44.72	48.82
TraesCS7D01G213300.1	Wheat	vacuole	43.65	47.4
TraesCS5D01G409600.1	Wheat	unclear	42.45	46.34
TraesCS2D01G396400.1	Wheat	golgi	42.21	45.3
TraesCS5D01G217700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.01	44.3
TraesCS3D01G416100.1	Wheat	extracellular	41.01	43.9
TraesCS4D01G228200.1	Wheat	extracellular, plasma membrane	41.01	43.57
TraesCS4D01G305500.1	Wheat	extracellular	38.61	40.4
TraesCS5D01G264000.1	Wheat	nucleus	38.85	39.95
TraesCS3D01G283500.1	Wheat	plasma membrane, vacuole	36.81	39.46
TraesCS2D01G036500.1	Wheat	plasma membrane	37.53	39.08
TraesCS3D01G255800.1	Wheat	vacuole	34.89	38.75
TraesCS3D01G283900.1	Wheat	plasma membrane, vacuole	35.01	38.52
TraesCS2D01G036400.1	Wheat	plasma membrane	35.61	38.22
TraesCS5D01G033200.1	Wheat	cytosol	33.57	37.43
TraesCS7D01G377700.1	Wheat	extracellular, plasma membrane	36.21	37.38
KRH06199	Soybean	endoplasmic reticulum, nucleus	49.88	29.15

Protein Annotations

Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225
PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF406	InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf
SUPFAM:SSF52743	EnsemblPlantsGene:TraesCS6D01G319900	EnsemblPlants:TraesCS6D01G319900.2	TIGR:cd02120	TIGR:cd04852	SEG:seg

Description

No Description!

Coordinates

chr6D:-:427710883..427713387

Molecular Weight (calculated)

85756.4 Da

IEP (calculated)

8.450

GRAVY (calculated)

0.030

Length

834 amino acids

Sequence
(BLAST)

001: MSGLSPCRPR ATLRGDLDRH GSCSPTRPDA VAGAYLYARP VPAATAPLAA TMDLLRPLAL AALCALLAAV AAAAATESEV EMGTAEAQSS YIVHVAAAHA
101: PPLPRRGLLT TRAYGSFLRE RIPVEMSSPA PSVLYSYAHA ATGFAARLTG RQAARLASSG SVLAVVPDTM QELHTTLTPS FLGLSPSSGL LKASNGATDV
201: VIGVIDTGVY PEGRPSFAAD ASLPPPPSKF RGRCVSGPSF NGSALCNNKL VGAKFFQRGQ EALRGRALGA DSKSPLDTNG HGTHTSSTAG GSPVAGAGFF
301: DYARGKAVGM APGARIAVYK ACGEEGCASS DILAAFDEAI ADNVDVLSVS LGAVGTAPNF YSDNTAVGAF RAVSKGIVVS ASAGNSGPGD STACNIAPWF
401: LTVGASTLNR QFPGDVVLGN GETFTGTTLY AGEPLGANKI PLVYGGDVGS KVCEEGKLNA TKVAGKIVLC ESGVNARAAK PLAVKLAGGA GAILASTKSF
501: GEQSITSPHV HPATAVSFVD AEKIFKYIRA QTSPTATIIF RGTVVGPTPP SPRMAAFSSR GPNFRAPEIF KPDVTAPGVD ILAAWTGANS PTELDSDTRR
601: VKYNIISGTS MSCPHVSGIA ALLRQARPEW SPAAIKSALM TTAYNADSSG GVIGDMSTSD ASTPFARGAG HIDPNRAVDP GLVYDAGTED YITFLCALGY
701: TAKQVAVFGS SISCSKRAGS VGDHNYPAFS VVFTSNKVAA VTQRRVVRNV GSDTAAAYTA KVTAPDGVRV TVSPETLRFS STEKTQEYVV TFAQRTTGSV
801: TEKYTFGSIE WSDGEHSVTS PIAITWPTSK VAEM

Best Arabidopsis Sequence Match ( AT2G05920.1 )
(BLAST)

001: MASSSSSSSS ITIITTFLFL LLHTTAKKTY IIRVNHSDKP ESFLTHHDWY TSQLNSESSL LYTYTTSFHG FSAYLDSTEA DSLLSSSNSI LDIFEDPLYT
101: LHTTRTPEFL GLNSEFGVHD LGSSSNGVII GVLDTGVWPE SRSFDDTDMP EIPSKWKGEC ESGSDFDSKL CNKKLIGARS FSKGFQMASG GGFSSKRESV
201: SPRDVDGHGT HTSTTAAGSA VRNASFLGYA AGTARGMATR ARVATYKVCW STGCFGSDIL AAMDRAILDG VDVLSLSLGG GSAPYYRDTI AIGAFSAMER
301: GVFVSCSAGN SGPTRASVAN VAPWVMTVGA GTLDRDFPAF ANLGNGKRLT GVSLYSGVGM GTKPLELVYN KGNSSSSNLC LPGSLDSSIV RGKIVVCDRG
401: VNARVEKGAV VRDAGGLGMI MANTAASGEE LVADSHLLPA IAVGKKTGDL LREYVKSDSK PTALLVFKGT VLDVKPSPVV AAFSSRGPNT VTPEILKPDV
501: IGPGVNILAG WSDAIGPTGL DKDSRRTQFN IMSGTSMSCP HISGLAGLLK AAHPEWSPSA IKSALMTTAY VLDNTNAPLH DAADNSLSNP YAHGSGHVDP
601: QKALSPGLVY DISTEEYIRF LCSLDYTVDH IVAIVKRPSV NCSKKFSDPG QLNYPSFSVL FGGKRVVRYT REVTNVGAAS SVYKVTVNGA PSVGISVKPS
701: KLSFKSVGEK KRYTVTFVSK KGVSMTNKAE FGSITWSNPQ HEVRSPVAFS WNRF

Arabidopsis Description

SBT1.8Subtilisin-like protease SBT1.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF6]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.