Factsheet for TraesCS6A01G339100.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, unclear
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G370000.1	Wheat	peroxisome, plastid, vacuole	95.0	89.38
TraesCS6D01G319900.2	Wheat	golgi, unclear	95.13	88.97
HORVU6Hr1G081750.1	Barley	extracellular, plasma membrane	89.87	84.66
TraesCS6A01G337900.1	Wheat	extracellular	80.26	84.37
TraesCS6A01G339200.1	Wheat	extracellular, unclear	84.23	83.8
TraesCS6A01G337800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	81.03	80.41
TraesCS6A01G036800.1	Wheat	extracellular	77.95	77.26
Zm00001d052104_P001	Maize	extracellular	71.67	71.67
TraesCS5A01G316000.1	Wheat	extracellular	72.05	71.59
EES05894	Sorghum	extracellular	71.03	71.03
EES07654	Sorghum	plastid	55.9	69.65
Zm00001d018281_P001	Maize	plasma membrane	68.46	67.85
TraesCS6A01G339400.1	Wheat	extracellular, golgi	58.72	58.49
GSMUA_Achr6P03640_001	Banana	plastid	45.9	56.92
CDX97539	Canola	plastid	33.46	54.26
PGSC0003DMT400088012	Potato	extracellular	51.92	52.8
Solyc06g062950.1.1	Tomato	extracellular	52.31	52.58
Os02t0779000-00	Rice	extracellular	43.08	52.26
PGSC0003DMT400012537	Potato	extracellular	51.92	52.19
Os02t0780200-01	Rice	extracellular	52.56	51.9
CDY33251	Canola	plasma membrane	51.54	51.87
Bra027376.1-P	Field mustard	extracellular, plasma membrane, vacuole	51.41	51.68
KRH47618	Soybean	extracellular	51.28	51.61
CDY52259	Canola	extracellular, plasma membrane, vacuole	48.59	51.49
Bra021529.1-P	Field mustard	plasma membrane	51.15	51.48
CDY39093	Canola	plasma membrane	51.15	51.48
VIT_09s0002g01040.t01	Wine grape	extracellular	50.77	51.36
AT3G14067.1	Thale cress	plasma membrane	51.03	51.22
VIT_09s0002g01030.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	50.77	50.25
TraesCS4A01G237500.1	Wheat	unclear	47.95	48.76
TraesCS7A01G211600.1	Wheat	vacuole	46.15	46.88
TraesCS5A01G399800.1	Wheat	golgi	45.51	46.41
TraesCS2A01G398900.1	Wheat	golgi	44.62	44.79
TraesCS4A01G071500.1	Wheat	extracellular, plasma membrane	44.1	43.99
TraesCS3A01G420500.1	Wheat	extracellular, plasma membrane	43.46	43.63
TraesCS5A01G214200.1	Wheat	mitochondrion	43.59	40.38
TraesCS4A01G407900.1	Wheat	extracellular	40.9	40.13
TraesCS3A01G284000.1	Wheat	plasma membrane, vacuole	37.82	40.03
TraesCS5A01G255900.1	Wheat	extracellular, mitochondrion, vacuole	41.54	39.85
TraesCS3A01G254900.1	Wheat	vacuole	38.72	39.37
TraesCS6A01G161600.1	Wheat	extracellular	39.62	39.31
TraesCS3A01G283600.2	Wheat	vacuole	39.1	39.2
TraesCS2A01G037100.1	Wheat	plasma membrane	37.82	37.97
TraesCS7A01G381400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	38.21	37.34
KRH06199	Soybean	endoplasmic reticulum, nucleus	51.54	28.17

Protein Annotations

Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225
PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF406	InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf
SUPFAM:SSF52743	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G339100	EnsemblPlants:TraesCS6A01G339100.1	TIGR:cd02120
TIGR:cd04852	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:572336072..572338414

Molecular Weight (calculated)

80421.9 Da

IEP (calculated)

8.054

GRAVY (calculated)

0.032

Length

780 amino acids

Sequence
(BLAST)

001: MDLLRPLALA ALCVVLLAAV AGAAATATDV EAQSSYIVHV AEAHAPRLPR RGLLTTRGYG SFLRDRIPVE MSSPAPSVLY SYEHAATGFA ARLTERQAAQ
101: LASSGSVHAV VPDTMQELHT TLTPSFLGLS PSSGLLKASN GATDVVIGVI DTGVYPEGRP SFAADPSLPP PPSKFRGRCV SGPSFNGSAL CNNKLVGAKF
201: FQRGQEALRG RALGADSKSP LDTNGHGTHT SSTAGGSAVA GAGFFDYARG KAVGMAPGAR IAVYKACGEE GCASSDILAA FDEAIADNVD VLSVSLGAVG
301: TAPNFYSDNT AVGAFRAVSK GIVVSASAGN SGPGDSTACN IAPWFLTVGA STLNRQFPGD VVLGNGQTFT GTTLYAGEPL GATKIPLVYG GDAGSKVCEE
401: GKLNATKVAG KIVLCESGVN ARAAKPYAVK LAGGAGAILA STKSFGEQSI TSPHVHPATA VSFVDAEKIF KYIRVQTSPT ATIVFRGTVV GPTPPSPRMA
501: SFSSRGPNFR APEIFKPDVT APGVDILAAW TGANSPTELE SDTRRVKYNI ISGTSMSCPH VSGIAALLRQ ARPEWSPAAI KSALMTTAYN VDSSGGVIGD
601: MSTSDASTPF ARGAGHIDPN SAVNPGLVYD AGTEDYINFL CALGYTAKQV AVFGSSISCS KRAGSSVGDH NYPAFSVVFA SNKVAVVTQR RVVRNVGSDA
701: AAAYTAKITA PDGVRVTVSP ETLQFSPTEK TQEYVLTFAQ RTTSSVTEKY TFGSIEWSDG EHSVTSPIAV TWPTSKVAEM

Best Arabidopsis Sequence Match ( AT2G05920.1 )
(BLAST)

001: MASSSSSSSS ITIITTFLFL LLHTTAKKTY IIRVNHSDKP ESFLTHHDWY TSQLNSESSL LYTYTTSFHG FSAYLDSTEA DSLLSSSNSI LDIFEDPLYT
101: LHTTRTPEFL GLNSEFGVHD LGSSSNGVII GVLDTGVWPE SRSFDDTDMP EIPSKWKGEC ESGSDFDSKL CNKKLIGARS FSKGFQMASG GGFSSKRESV
201: SPRDVDGHGT HTSTTAAGSA VRNASFLGYA AGTARGMATR ARVATYKVCW STGCFGSDIL AAMDRAILDG VDVLSLSLGG GSAPYYRDTI AIGAFSAMER
301: GVFVSCSAGN SGPTRASVAN VAPWVMTVGA GTLDRDFPAF ANLGNGKRLT GVSLYSGVGM GTKPLELVYN KGNSSSSNLC LPGSLDSSIV RGKIVVCDRG
401: VNARVEKGAV VRDAGGLGMI MANTAASGEE LVADSHLLPA IAVGKKTGDL LREYVKSDSK PTALLVFKGT VLDVKPSPVV AAFSSRGPNT VTPEILKPDV
501: IGPGVNILAG WSDAIGPTGL DKDSRRTQFN IMSGTSMSCP HISGLAGLLK AAHPEWSPSA IKSALMTTAY VLDNTNAPLH DAADNSLSNP YAHGSGHVDP
601: QKALSPGLVY DISTEEYIRF LCSLDYTVDH IVAIVKRPSV NCSKKFSDPG QLNYPSFSVL FGGKRVVRYT REVTNVGAAS SVYKVTVNGA PSVGISVKPS
701: KLSFKSVGEK KRYTVTFVSK KGVSMTNKAE FGSITWSNPQ HEVRSPVAFS WNRF

Arabidopsis Description

SBT1.8Subtilisin-like protease SBT1.8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUF6]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.