Factsheet for TraesCS4A01G407900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G305500.1	Wheat	extracellular	94.72	94.48
TraesCS4B01G307400.1	Wheat	extracellular	94.47	94.47
OQU93252	Sorghum	extracellular	77.74	78.33
Zm00001d027627_P001	Maize	extracellular	77.48	77.68
PGSC0003DMT400085430	Potato	extracellular, plasma membrane	58.87	60.78
VIT_07s0005g04410.t01	Wine grape	extracellular, plasma membrane	58.11	60.31
Solyc06g083720.1.1	Tomato	nucleus	55.22	56.94
TraesCS4A01G237500.1	Wheat	unclear	48.05	49.8
TraesCS4A01G071500.1	Wheat	extracellular, plasma membrane	47.55	48.34
TraesCS5A01G399800.1	Wheat	golgi	45.91	47.71
TraesCS3A01G420500.1	Wheat	extracellular, plasma membrane	45.79	46.85
TraesCS7A01G211600.1	Wheat	vacuole	43.65	45.18
TraesCS2A01G398900.1	Wheat	golgi	42.89	43.89
TraesCS5A01G214200.1	Wheat	mitochondrion	45.53	42.99
TraesCS3A01G284000.1	Wheat	plasma membrane, vacuole	39.75	42.88
TraesCS6A01G339400.1	Wheat	extracellular, golgi	41.89	42.53
TraesCS3A01G283600.2	Wheat	vacuole	41.26	42.16
TraesCS6A01G337900.1	Wheat	extracellular	39.12	41.91
TraesCS6A01G036800.1	Wheat	extracellular	41.38	41.8
TraesCS6A01G337800.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	41.26	41.73
TraesCS5A01G316000.1	Wheat	extracellular	41.13	41.66
TraesCS5A01G255900.1	Wheat	extracellular, mitochondrion, vacuole	42.52	41.57
TraesCS6A01G161600.1	Wheat	extracellular	40.5	40.97
TraesCS6A01G339200.1	Wheat	extracellular, unclear	40.38	40.94
TraesCS6A01G339100.1	Wheat	extracellular, unclear	40.13	40.9
TraesCS7A01G381400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	40.75	40.6
TraesCS3A01G254900.1	Wheat	vacuole	36.98	38.33
TraesCS2A01G037100.1	Wheat	plasma membrane	36.35	37.19

Protein Annotations

MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200	Gene3D:3.50.30.30	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	InterPro:PA_domain	PFAM:PF00082	PFAM:PF02225
PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF350	InterPro:Peptidase_S8/S53_dom
InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf
SUPFAM:SSF52743	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G407900	EnsemblPlants:TraesCS4A01G407900.1	TIGR:cd02120
TIGR:cd04852	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:680451169..680453556

Molecular Weight (calculated)

83693.9 Da

IEP (calculated)

7.979

GRAVY (calculated)

-0.087

Length

795 amino acids

Sequence
(BLAST)

001: MGFLHPFASH VVLFFLFLSS LAFLHGAAAD QEEALQTYIV QLHPRGSTGG GESASSDHDW HLAFLAKSVP SSEEQDDKRH MSSSRLLYSY HTVFDGFAAR
101: LTAGEAAALR ALQGVSSVRE DRRVELHTTY SYRFLGLNVC PTGAWARARY GRGVVVGVLD TGVWPESPSF DDRGMPPVPD RWRGVCETGE RFNATNCNRK
201: LVGARFYSNG HRANYPTDPS DAAARTREYA SPRDAHGHGT HTASTAAGSA VAGASVLGAG AGEARGVAPG AHVAAYKVCW FNGCFSSDIL AGMDDAVRDG
301: VDVLSLSLGG FPIPLFEDSI AIGSFRATVR GVSVVSAAGN NGPEPSSVAN EAPWMLTVGA ATLDRRFPAY VRLGNGRVLY GESMYPGKVG LKNGGKALEL
401: FYAAGGSREV MYCMKGSLSA ADVAGKMVVC DRGITGRADK GQAVKEAGGA AMVLANSEIN RQEDSVDVHV LPATLIGYQE AVELKKYISS TPRPVARIAF
501: GGTRIGRARA PAVALFSARG PSVTSPSVLK PDVIAPGVNI IAAWPGSVGP SGLDGDARRT NFTVLSGTSM ACPHVSGIAA LVRSAHPSWS PAMVRSAIMT
601: TADVTDRHGK PITDGDGGDR ADVFGMGAGH VNPALAVDPG LVYDIEPADY VTHLCTLGYT QREVFKITHS AVDCSELLHE NPGFTLNYPS MAVAFKDGGG
701: ETSAVLRRTV TNVGAPNSTY TARVGAPPGV KVTVAPTTLA FAEFGEKKSF QVWVDASGAA GRDSGEGYLV WKQRGAGLGR RRTVRSPIAV TWPVE

Best Arabidopsis Sequence Match ( AT1G04110.1 )
(BLAST)

001: MEPKPFFLCI IFLLFCSSSS EILQKQTYIV QLHPNSETAK TFASKFDWHL SFLQEAVLGV EEEEEEPSSR LLYSYGSAIE GFAAQLTESE AEILRYSPEV
101: VAVRPDHVLQ VQTTYSYKFL GLDGFGNSGV WSKSRFGQGT IIGVLDTGVW PESPSFDDTG MPSIPRKWKG ICQEGESFSS SSCNRKLIGA RFFIRGHRVA
201: NSPEESPNMP REYISARDST GHGTHTASTV GGSSVSMANV LGNGAGVARG MAPGAHIAVY KVCWFNGCYS SDILAAIDVA IQDKVDVLSL SLGGFPIPLY
301: DDTIAIGTFR AMERGISVIC AAGNNGPIES SVANTAPWVS TIGAGTLDRR FPAVVRLANG KLLYGESLYP GKGIKNAGRE VEVIYVTGGD KGSEFCLRGS
401: LPREEIRGKM VICDRGVNGR SEKGEAVKEA GGVAMILANT EINQEEDSID VHLLPATLIG YTESVLLKAY VNATVKPKAR IIFGGTVIGR SRAPEVAQFS
501: ARGPSLANPS ILKPDMIAPG VNIIAAWPQN LGPTGLPYDS RRVNFTVMSG TSMSCPHVSG ITALIRSAYP NWSPAAIKSA LMTTADLYDR QGKAIKDGNK
601: PAGVFAIGAG HVNPQKAINP GLVYNIQPVD YITYLCTLGF TRSDILAITH KNVSCNGILR KNPGFSLNYP SIAVIFKRGK TTEMITRRVT NVGSPNSIYS
701: VNVKAPEGIK VIVNPKRLVF KHVDQTLSYR VWFVLKKKNR GGKVASFAQG QLTWVNSHNL MQRVRSPISV TLKTN

Arabidopsis Description

SBT1.2SDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WPN6]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.