Factsheet for VIT_07s0005g04410.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400085430	Potato	extracellular, plasma membrane	75.59	75.19
Solyc06g083720.1.1	Tomato	nucleus	72.85	72.37
OQU93252	Sorghum	extracellular	62.4	60.58
Zm00001d027627_P001	Maize	extracellular	62.01	59.9
TraesCS4B01G307400.1	Wheat	extracellular	60.7	58.49
TraesCS4D01G305500.1	Wheat	extracellular	60.57	58.22
TraesCS4A01G407900.1	Wheat	extracellular	60.31	58.11
VIT_11s0016g00960.t01	Wine grape	extracellular, vacuole	46.34	46.65
VIT_15s0048g01120.t01	Wine grape	cytosol	45.69	46.3
VIT_15s0048g01180.t01	Wine grape	extracellular	46.08	46.02
VIT_09s0002g01040.t01	Wine grape	extracellular	45.82	45.53
VIT_03s0038g02230.t01	Wine grape	extracellular	45.95	45.48
VIT_18s0001g09360.t01	Wine grape	extracellular	44.78	44.84
VIT_09s0002g01030.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	45.82	44.54
VIT_07s0129g00490.t01	Wine grape	extracellular	44.26	44.2
VIT_16s0022g02200.t01	Wine grape	extracellular, vacuole	43.34	42.89
VIT_00s0878g00010.t01	Wine grape	cytosol, nucleus	31.85	42.51
VIT_15s0048g01130.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	45.69	42.22
VIT_07s0005g00830.t01	Wine grape	extracellular, plasma membrane	40.08	41.49
VIT_19s0015g01420.t01	Wine grape	extracellular, plasma membrane	40.99	40.89
VIT_10s0003g02220.t01	Wine grape	nucleus	39.82	39.46
VIT_00s0454g00010.t01	Wine grape	extracellular	35.51	39.02
VIT_00s0454g00040.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.6	34.02
VIT_15s0048g01170.t01	Wine grape	cytosol	46.08	23.96
VIT_00s0454g00030.t01	Wine grape	extracellular, plasma membrane	39.3	16.16

Protein Annotations

EntrezGene:100265217	wikigene:100265217	MapMan:19.4.2.1.1	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200
Gene3D:3.50.30.30	ProteinID:CCB60179	ProteinID:CCB60179.1	UniProt:F6HZR3	EMBL:FN596502	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	EntrezGene:LOC100265217	wikigene:LOC100265217	InterPro:PA_domain
PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795
PANTHER:PTHR10795:SF350	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3
MEROPS:S08.084	InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52743	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000210A2C9	ArrayExpress:VIT_07s0005g04410	EnsemblPlantsGene:VIT_07s0005g04410	EnsemblPlants:VIT_07s0005g04410.t01	unigene:Vvi.4502	RefSeq:XP_002269766
RefSeq:XP_002269766.2	RefSeq:XP_010652423.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:-:7494320..7496752

Molecular Weight (calculated)

82831.2 Da

IEP (calculated)

9.277

GRAVY (calculated)

-0.087

Length

766 amino acids

Sequence
(BLAST)

001: MEAKAQLLFS VLFLFLVFVH AQSLQTYIIQ LHPHGATASS FSSKVQWHLS FLERIMFSED DPSSRLLYSY HSAMEGFAAQ LSETELESLR KLGEVIAVRP
101: DTRLQLHTTY SYKFLGLSPA SRGGWFQSGF GHGTIVGVLD TGVWPESPSF SDHGMPPVPK KWRGVCQEGQ DFNSSNCNRK LIGARFFSKG HRVASISPSS
201: DTVVEYVSAR DSHGHGTHTS STAGGASVPM ASVLGNGAGV AQGMAPRAHI AIYKVCWFSG CYSSDILAAM DVAIRDGVDI LSLSLGGFPI PLFDDSIAIG
301: SFRAMEHGIS VICAAGNNGP IQSSVANEAP WITTVGASTL DRRFPAIVRM GNGKRLYGES MYPGKHNPYA GKELELVYVT GGDSGSEFCF KGSLPRAKVL
401: GKMVVCDRGV NGRAEKGEAV KEAGGAAMIL ANTDINLEED SVDAHVLPAS LIGFAESVQL KSYMNSSRTP TARIEFGGTV IGKSRAPAVA QFSSRGPSLT
501: NPTILKPDII APGVNIIAAW PQNLGPSGLP EDSRRVNFTV MSGTSMACPH ISGIAALIHS ANPTWTPAAI KSAMITTADV TDHTGKPIMD SNKPAGVFAM
601: GAGQVNPEKA IDPGLIYDIK PDEYITHLCT LGYTRSEISA ITHRNVSCHE LVQKNKGFSL NYPSISVIFR HGMMSRMIKR RLTNVGVPNS IYSVEVVAPE
701: GVKVRVKPHH LIFKHINQSL SYRVWFISRK RTGEEKTRFA QGHLTWVHSH HTSYKVRSPI SVTWAK

Best Arabidopsis Sequence Match ( AT1G04110.1 )
(BLAST)

001: MEPKPFFLCI IFLLFCSSSS EILQKQTYIV QLHPNSETAK TFASKFDWHL SFLQEAVLGV EEEEEEPSSR LLYSYGSAIE GFAAQLTESE AEILRYSPEV
101: VAVRPDHVLQ VQTTYSYKFL GLDGFGNSGV WSKSRFGQGT IIGVLDTGVW PESPSFDDTG MPSIPRKWKG ICQEGESFSS SSCNRKLIGA RFFIRGHRVA
201: NSPEESPNMP REYISARDST GHGTHTASTV GGSSVSMANV LGNGAGVARG MAPGAHIAVY KVCWFNGCYS SDILAAIDVA IQDKVDVLSL SLGGFPIPLY
301: DDTIAIGTFR AMERGISVIC AAGNNGPIES SVANTAPWVS TIGAGTLDRR FPAVVRLANG KLLYGESLYP GKGIKNAGRE VEVIYVTGGD KGSEFCLRGS
401: LPREEIRGKM VICDRGVNGR SEKGEAVKEA GGVAMILANT EINQEEDSID VHLLPATLIG YTESVLLKAY VNATVKPKAR IIFGGTVIGR SRAPEVAQFS
501: ARGPSLANPS ILKPDMIAPG VNIIAAWPQN LGPTGLPYDS RRVNFTVMSG TSMSCPHVSG ITALIRSAYP NWSPAAIKSA LMTTADLYDR QGKAIKDGNK
601: PAGVFAIGAG HVNPQKAINP GLVYNIQPVD YITYLCTLGF TRSDILAITH KNVSCNGILR KNPGFSLNYP SIAVIFKRGK TTEMITRRVT NVGSPNSIYS
701: VNVKAPEGIK VIVNPKRLVF KHVDQTLSYR VWFVLKKKNR GGKVASFAQG QLTWVNSHNL MQRVRSPISV TLKTN

Arabidopsis Description

SBT1.2SDD1 [Source:UniProtKB/TrEMBL;Acc:A0A178WPN6]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.