Factsheet for VIT_10s0003g02220.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g071580.2.1	Tomato	nucleus	66.62	66.45
PGSC0003DMT400018621	Potato	extracellular	65.46	65.29
CDY23110	Canola	extracellular	62.1	61.86
CDY13044	Canola	extracellular	61.84	61.6
GSMUA_Achr6P26130_001	Banana	cytosol	49.81	61.4
AT5G45650.2	Thale cress	extracellular, plasma membrane, vacuole	62.23	60.81
Bra017598.1-P	Field mustard	extracellular	61.97	60.63
KRH21143	Soybean	nucleus	60.67	59.44
TraesCS3D01G283500.1	Wheat	plasma membrane, vacuole	58.73	58.35
TraesCS3A01G283600.2	Wheat	vacuole	58.6	58.23
TraesCS3B01G317300.1	Wheat	unclear	58.47	58.02
TraesCS3A01G284000.1	Wheat	plasma membrane, vacuole	55.11	57.8
Os01t0727800-01	Rice	cytosol, plastid	28.33	56.59
TraesCS3D01G283900.1	Wheat	plasma membrane, vacuole	54.08	55.15
HORVU3Hr1G069030.12	Barley	cytosol, mitochondrion	53.17	54.73
AT5G45640.1	Thale cress	extracellular, golgi	52.39	53.71
KXG33299	Sorghum	plastid	57.18	53.45
Zm00001d043581_P001	Maize	mitochondrion	55.37	53.1
KRH11105	Soybean	cytosol	23.8	51.98
VIT_00s0878g00010.t01	Wine grape	cytosol, nucleus	36.87	49.65
VIT_19s0015g01420.t01	Wine grape	extracellular, plasma membrane	46.18	46.48
Os01t0727840-00	Rice	extracellular	9.31	46.15
VIT_00s0454g00010.t01	Wine grape	extracellular	41.01	45.48
VIT_18s0001g09360.t01	Wine grape	extracellular	43.47	43.92
VIT_03s0038g02230.t01	Wine grape	extracellular	43.08	43.02
VIT_11s0016g00960.t01	Wine grape	extracellular, vacuole	42.17	42.84
VIT_07s0129g00490.t01	Wine grape	extracellular	42.17	42.5
VIT_16s0022g02200.t01	Wine grape	extracellular, vacuole	41.91	41.86
VIT_09s0002g01040.t01	Wine grape	extracellular	41.53	41.63
VIT_15s0048g01120.t01	Wine grape	cytosol	40.49	41.4
VIT_09s0002g01030.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	41.91	41.12
VIT_00s0454g00040.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.01	40.69
VIT_15s0048g01180.t01	Wine grape	extracellular	39.97	40.29
VIT_07s0005g04410.t01	Wine grape	extracellular, plasma membrane	39.46	39.82
VIT_15s0048g01130.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	41.53	38.72
VIT_07s0005g00830.t01	Wine grape	extracellular, plasma membrane	37.0	38.65
VIT_15s0048g01170.t01	Wine grape	cytosol	41.01	21.52
VIT_00s0454g00030.t01	Wine grape	extracellular, plasma membrane	46.57	19.32

Protein Annotations

EntrezGene:100252070	wikigene:100252070	MapMan:19.4.2.1.5	Gene3D:2.60.40.2310	Gene3D:3.30.70.80	Gene3D:3.40.50.200
Gene3D:3.50.30.30	ProteinID:CCB55738	ProteinID:CCB55738.1	UniProt:F6HME9	EMBL:FN595992	GO:GO:0003674
GO:GO:0003824	GO:GO:0004252	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	InterPro:IPR036852	InterPro:IPR037045	EntrezGene:LOC100252070	wikigene:LOC100252070	InterPro:PA_domain
PFAM:PF00082	PFAM:PF02225	PFAM:PF05922	PRINTS:PR00723	ScanProsite:PS00138	PANTHER:PTHR10795
PANTHER:PTHR10795:SF375	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf	InterPro:Peptidase_S8_Ser-AS	InterPro:Peptidase_S8_subtilisin-rel	InterPro:Peptidases_S8_3
InterPro:S8pro/Inhibitor_I9	InterPro:S8pro/Inhibitor_I9_sf	SUPFAM:SSF52025	SUPFAM:SSF52743	UniParc:UPI0002108810	ArrayExpress:VIT_10s0003g02220
EnsemblPlantsGene:VIT_10s0003g02220	EnsemblPlants:VIT_10s0003g02220.t01	RefSeq:XP_002269555	RefSeq:XP_002269555.2	SEG:seg	:

Description

No Description!

Coordinates

chr10:-:3990480..3995796

Molecular Weight (calculated)

83803.5 Da

IEP (calculated)

9.960

GRAVY (calculated)

-0.262

Length

773 amino acids

Sequence
(BLAST)

001: MIYKKKLFPR KEPAVTTQVY IVYFGEHSGQ KALHEIEDYH HSYLLSVKAS EEEARDSLLY SYKHSINGFA AVLSPHEVTK LSEMDEVVSV FPSQRKKHTL
101: HTTRSWEFVG LEKELGREQL KKQKKTRNLL EKARYGDQII VGMVDNGVWP ESKSFSDEGM GPIPKSWKGI CQTGVAFNSS HCNRKLIGAR YYLKGYESDN
201: GPLNTTTDYR SPRDKDGHGT HTASTVAGRR VHNVSALGYA PGTASGGAPL ARLAIYKVCW PIPGQTKVKG NTCYEEDMLA AIDDAIADGV HVLSISIGTS
301: QPFTYAKDGI AIGALHATKN NIVVACSAGN SGPAPSTLSN PAPWIITVGA SSIDRAFVTP LVLGNGMKLM GQSVTPYKLK KKMYPLVFAA DAVVPGVPKN
401: NTAANCNFGS LDPKKVKGKI VLCLRGGMTL RIEKGIEVKR AGGVGFILGN TPENGFDLPA DPHLLPATAV SSEDVTKIRN YIKSTKKPMA TIIPGRTVLH
501: AKPAPFMASF ISRGPNTIDP NILKPDITGP GLNILAAWSE GSSPTRSELD PRVVKYNIFS GTSMSCPHVA AAVALLKAIH PNWSSAAIRS ALMTTAGLVN
601: NIGKPITDSS GNPTNPFQYG SGHFRPTKAA DPGLVYDTTY TDYLLYLCNI GVKSLDSSFK CPKVSPSSNN LNYPSLQISK LKRKVTVTRT ATNVGSARSI
701: YFSSVKSPVG FSVRVEPSIL YFNHVGQKKS FDITVEARNP KASKKNDTEY AFGWYTWNDG IHNVRSPMAV SLA

Best Arabidopsis Sequence Match ( AT5G45650.2 )
(BLAST)

001: MKKLTSLFPL LFLIPLLASC AEEKQVYIVY FGEHKGDKAF HEIEEHHHSY LQSVKESEED ARASLLYSYK HSINGFAAEL TPDQASKLEK LAEVVSVFKS
101: HPRKYEAHTT RSWEFVGLEE EETDSDVPRR KNDADDRFRV GRNFLKKAKH GDGIIVGVLD SGVWPESKSF NDKGMGPVPK SWKGICQTGV AFNSSHCNRK
201: IIGARYYVKG YERYYGAFNA TANKDFLSPR DPDGHGSHTA STAVGRRVLG ASALGGFAKG SASGGAPLAR LAIYKACWAK PNAEKVEGNI CLEEDMLAAI
301: DDAIADGVHV ISISIGTTEP FPFTQDGIAM GALHAVKRNI VVAASAGNSG PKPGTLSNLA PWIITVGAST LDRAFVGGLV LGNGYTIKTD SITAFKMDKF
401: APLVYASNVV VPGIALNETS QCLPNSLKPE LVSGKVVLCL RGAGSRIGKG MEVKRAGGAG MILGNIAANG NEVPSDSHFV PTAGVTPTVV DKILEYIKTD
501: KNPKAFIKPG KTVYKYQAAP SMTGFSSRGP NVVDPNILKP DITAPGLYIL AAWSGADSPS KMSVDQRVAG YNIYSGTSMS CPHVAGAIAL LKAIHPKWSS
601: AAIRSALMTT AWMTNDKKKP IQDTTGLPAN PFALGSGHFR PTKAADPGLV YDASYRAYLL YGCSVNITNI DPTFKCPSKI PPGYNHNYPS IAVPNLKKTV
701: TVKRTVTNVG TGNSTSTYLF SVKPPSGISV KAIPNILSFN RIGQKQRFKI VIKPLKNQVM NATEKGQYQF GWFSWTDKVH VVRSPIAVSL A

Arabidopsis Description

SBT5.6Subtilisin-like protease SBT5.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK76]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.